Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TUBD1

Gene Name Gene ID Reads Annotation
TUBD1 ENSGALG00000005173 1364 tubulin delta 1 [Source:HGNC Symbol;Acc:HGNC:16811]











Genes with expression patterns similar to TUBD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TUBD1 ENSGALG00000005173 1364 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tubulin delta 1 [Source:HGNC Symbol;Acc:HGNC:16811]
2. MPHOSPH8 ENSGALG00000017145 6280 1.774 - - - - - - 0.829 0.945 - - M-phase phosphoprotein 8 [Source:NCBI gene;Acc:418957]
3. RPAIN ENSGALG00000001666 2676 0.999 - - - - - - - 0.999 - - RPA interacting protein [Source:HGNC Symbol;Acc:HGNC:28641]
4. SETD9 ENSGALG00000014719 5081 0.999 - - - - - - - 0.999 - - SET domain containing 9, transcript variant X2
5. ZNF318 ENSGALG00000034040 1758 0.998 - - - - - - - 0.998 - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
6. LAMA5 486 0.998 - - - - - - - 0.998 - - laminin subunit alpha 5, transcript variant X3
7. ACTA1 ENSGALG00000011086 2543 0.998 - - - - - - - 0.998 - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
8. REPS2 ENSGALG00000016545 3347 0.998 - - - - - - - 0.998 - - RALBP1 associated Eps domain containing 2 [Source:NCBI gene;Acc:418617]
9. NCAPG2 ENSGALG00000006525 2319 0.998 - - - - - - - 0.998 - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
10. CENPJ ENSGALG00000017148 1415 0.998 - - - - - - - 0.998 - - centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
11. BYSL ENSGALG00000003467 7555 0.998 - - - - - - - 0.998 - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
12. RNF19B ENSGALG00000039716 662 0.998 - - - - - - - 0.998 - - ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886]
13. VPRBP VPRBP 4037 0.998 - - - - - - - 0.998 - -
14. TLCD2 ENSGALG00000021592 1166 0.998 - - - - - - - 0.998 - - TLC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33522]
15. CNTRL ENSGALG00000001513 1773 0.998 - - - - - - - 0.998 - - centriolin [Source:NCBI gene;Acc:417121]
16. QSOX2 ENSGALG00000001758 638 0.998 - - - - - - - 0.998 - - quiescin sulfhydryl oxidase 2 [Source:HGNC Symbol;Acc:HGNC:30249]
17. LIMCH1 ENSGALG00000014258 1987 0.997 - - - - - - - 0.997 - - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
18. SGCB ENSGALG00000013968 3214 0.997 - - - - - - - 0.997 - - sarcoglycan beta [Source:NCBI gene;Acc:422760]
19. STX8 ENSGALG00000001238 7403 0.997 - - - - - - - 0.997 - - syntaxin 8 [Source:NCBI gene;Acc:417321]
20. NQO2 ENSGALG00000025747 2287 0.997 - - - - - - - 0.997 - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
21. AMACR ENSGALG00000003326 2657 0.997 - - - - - - - 0.997 - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
22. GTF2H3 ENSGALG00000023682 9914 0.997 - - - - - - - 0.997 - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
23. FRAS1 ENSGALG00000010316 5008 0.997 - - - - - - - 0.997 - - Fraser extracellular matrix complex subunit 1, transcript variant X2
24. ANKRD46 ENSGALG00000041445 3791 0.996 - - - - - - - 0.996 - - ankyrin repeat domain 46, transcript variant X1
25. AKAP2 ENSGALG00000015656 4310 0.996 - - - - - - - 0.996 - - A kinase (PRKA) anchor protein 2 [Source:NCBI gene;Acc:100533110]
26. EDNRA ENSGALG00000010013 2472 0.996 - - - - - - - 0.996 - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
27. PTTG1IP ENSGALG00000005675, ENSGALG00000009044 10949 0.995 - - - - - - - 0.995 - - pituitary tumor-transforming 1 interacting protein, transcript variant X1
28. GTF2A1 ENSGALG00000010576 4570 0.995 - - - - - - - 0.995 - - general transcription factor IIA subunit 1 [Source:NCBI gene;Acc:423389]
29. EVX1 ENSGALG00000037310 1974 0.995 - - - - - - - 0.995 - - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
30. TAPA1 TAPA1 8669 0.994 - - - - - - - 0.994 - -
31. WDHD1 ENSGALG00000012199 3570 0.994 - - - - - - - 0.994 - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
32. BMS1 ENSGALG00000002624 8339 0.993 - - - - - - - 0.993 - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
33. ERBB2IP ERBB2IP 5800 0.993 - - - - - - - 0.993 - -
34. NAP1L1 ENSGALG00000010238 14506 0.993 - - - - - - - 0.993 - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
35. SUPV3L1 ENSGALG00000004197 4141 0.992 - - - - - - - 0.992 - - Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
36. GPR27 ENSGALG00000027091 8111 0.991 - - - - - - - 0.991 - - G protein-coupled receptor 27
37. MON2 ENSGALG00000009795 3868 0.99 - - - - - - - 0.990 - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:NCBI gene;Acc:417818]
38. MRPS35 ENSGALG00000036730 6327 0.988 - - - - - - - 0.988 - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
39. GNG2 ENSGALG00000027629 9404 0.985 - - - - - - - 0.985 - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
40. ACSF2 ENSGALG00000019768 2727 0.985 - - - - - - - 0.985 - - acyl-CoA synthetase family member 2 [Source:HGNC Symbol;Acc:HGNC:26101]
41. SOS1 ENSGALG00000039450 3941 0.984 - - - - - - - 0.984 - - SOS Ras/Rac guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:11187]
42. AMD1 ENSGALG00000039575 8900 0.983 - - - - - - - 0.983 - - adenosylmethionine decarboxylase 1 [Source:NCBI gene;Acc:421755]
43. SERPINE2 ENSGALG00000005135 16108 0.98 - - - - - - - 0.980 - - serpin family E member 2 [Source:NCBI gene;Acc:424805]
44. MRPS11 ENSGALG00000006777 16009 0.979 - - - - - - - 0.979 - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
45. MRE11A MRE11A 5754 0.978 - - - - - - - 0.978 - -
46. AP1B1 ENSGALG00000042213 4828 0.975 - - - - - - - 0.975 - - adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
47. IST1 ENSGALG00000000811 10527 0.97 - - - - - - - 0.970 - - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
48. CTNNA1 ENSGALG00000002447 22379 0.969 - - - - - - - 0.969 - - catenin alpha 1 [Source:HGNC Symbol;Acc:HGNC:2509]
49. PIGX ENSGALG00000006408 5783 0.964 - - - - - - 0.964 - - - phosphatidylinositol glycan anchor biosynthesis class X [Source:HGNC Symbol;Acc:HGNC:26046]
50. COPS2 ENSGALG00000000404 8980 0.964 - - - - - - - 0.964 - - COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
51. RAD23B ENSGALG00000015540 10828 0.959 - - - - - - - 0.959 - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
52. ACE ENSGALG00000000498 1398 0.947 - - - - - - - 0.947 - - angiotensin I converting enzyme [Source:NCBI gene;Acc:419953]
53. C9orf78 ENSGALG00000004152 7140 0.947 - - - - - - - 0.947 - - chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
54. TLE3 ENSGALG00000008120 2655 0.946 - - - - - - 0.946 - - - transducin like enhancer of split 3, transcript variant X10
55. GBA2 ENSGALG00000002412 2913 0.934 - - - - - - 0.934 - - - glucosylceramidase beta 2 [Source:HGNC Symbol;Acc:HGNC:18986]
56. HNRNPH1 HNRNPH1 8819 0.931 - - - - - - - 0.931 - -
57. PSPC1 ENSGALG00000017142 13036 0.93 - - - - - - - 0.930 - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
58. ANKRD10 ENSGALG00000030125 3611 0.928 - - - - - - - 0.928 - - ankyrin repeat domain 10 [Source:NCBI gene;Acc:418760]
59. EXOSC8 ENSGALG00000017048 2939 0.928 - - - - - - 0.928 - - - exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
60. B4GAL-T7 B4GAL-T7 12356 0.926 - - - - - - 0.926 - - -
61. SNX9 ENSGALG00000013710 5295 0.919 - - - - - - - 0.919 - - sorting nexin 9 [Source:HGNC Symbol;Acc:HGNC:14973]
62. RB1 ENSGALG00000016997 3712 0.916 - - - - - - 0.916 - - - retinoblastoma 1 [Source:NCBI gene;Acc:386582]
63. MAB21L1 ENSGALG00000045052 1677 0.916 - - - - - - - 0.916 - - mab-21 like 1 [Source:NCBI gene;Acc:395208]
64. MOXD1 ENSGALG00000002911 8523 0.915 - - - - - - - 0.915 - - monooxygenase DBH like 1 [Source:NCBI gene;Acc:395333]
65. MND1 ENSGALG00000009212 11765 0.914 - - - - - - - 0.914 - - meiotic nuclear divisions 1 [Source:NCBI gene;Acc:422399]
66. ATP5J 14451 0.913 - - - - - - 0.913 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
67. CPQ ENSGALG00000030866 3962 0.913 - - - - - - 0.913 - - - carboxypeptidase Q [Source:NCBI gene;Acc:420238]
68. NHP2L1 NHP2L1 12124 0.912 - - - - - - - 0.912 - -
69. TIPIN ENSGALG00000007649 3565 0.909 - - - - - - 0.909 - - - TIMELESS interacting protein [Source:NCBI gene;Acc:415548]
70. MBNL3 ENSGALG00000032045 10980 0.908 - - - - - - - 0.908 - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
71. EXOSC3 ENSGALG00000002426 7255 0.907 - - - - - - - 0.907 - - exosome component 3 [Source:NCBI gene;Acc:423626]
72. Sep-05 Sep-05 5887 0.907 - - - - - - - 0.907 - -
73. PSMD6 ENSGALG00000007315 3906 0.906 - - - - - - 0.906 - - - proteasome 26S subunit, non-ATPase 6 [Source:HGNC Symbol;Acc:HGNC:9564]
74. MPP1 ENSGALG00000005071 3865 0.902 - - - - - - 0.902 - - - membrane palmitoylated protein 1 [Source:NCBI gene;Acc:422197]
75. ENSGALG00000014852 ENSGALG00000014852 15288 0.901 - - - - - - - 0.901 - -
76. OPTC ENSGALG00000003554 3698 0.898 - - - - - - 0.898 - - - opticin [Source:NCBI gene;Acc:395130]
77. BCL9 ENSGALG00000037655 4620 0.895 - - - - - - 0.895 - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
78. DUSP14 ENSGALG00000027641 3662 0.894 - - - - - - 0.894 - - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
79. POLE3 ENSGALG00000008873 9161 0.893 - - - - - - - 0.893 - - DNA polymerase epsilon 3, accessory subunit [Source:NCBI gene;Acc:417275]
80. PSMC3 ENSGALG00000008108 22922 0.892 - - - - - - - 0.892 - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
81. DDX18 ENSGALG00000012147 12463 0.892 - - - - - - - 0.892 - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
82. GPI ENSGALG00000004956 40030 0.888 - - - - - - - 0.888 - - glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
83. ACTR2 ENSGALG00000008779 17812 0.882 - - - - - - - 0.882 - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
84. DPCD ENSGALG00000007731 7225 0.881 - - - - - - 0.881 - - - deleted in primary ciliary dyskinesia homolog (mouse) [Source:NCBI gene;Acc:423852]
85. ATL1 ENSGALG00000012339 3789 0.877 - - - - - - 0.877 - - - atlastin GTPase 1 [Source:HGNC Symbol;Acc:HGNC:11231]
86. WNT4 ENSGALG00000041708 1277 0.874 - - - - - - 0.874 - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
87. EDF1 ENSGALG00000038003 6757 0.874 - - - - - - 0.874 - - - endothelial differentiation related factor 1 [Source:NCBI gene;Acc:417286]
88. KDM4A ENSGALG00000010074 7219 0.873 - - - - - - 0.873 - - - lysine demethylase 4A
89. DCUN1D2 ENSGALG00000029145 2414 0.873 - - - - - - 0.873 - - - defective in cullin neddylation 1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20328]
90. DGCR6 ENSGALG00000027369 7882 0.871 - - - - - - - 0.871 - - DiGeorge syndrome critical region gene 6 [Source:NCBI gene;Acc:395907]
91. GGA3 ENSGALG00000007992 3566 0.871 - - - - - - 0.871 - - - golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:NCBI gene;Acc:422121]
92. TSNAX ENSGALG00000037177 3246 0.864 - - - - - - - 0.864 - - translin associated factor X [Source:NCBI gene;Acc:421526]
93. LONP2 ENSGALG00000003942 3380 0.862 - - - - - - 0.862 - - - lon peptidase 2, peroxisomal [Source:NCBI gene;Acc:415740]
94. PTEN ENSGALG00000003634 5048 0.86 - - - - - - - 0.860 - - phosphatase and tensin homolog [Source:HGNC Symbol;Acc:HGNC:9588]
95. ENSGALG00000002903 ENSGALG00000002903 18304 0.86 - - - - - - - 0.860 - -
96. PPP2CA ENSGALG00000006462 26306 0.853 - - - - - - - 0.853 - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
97. RALGAPB ENSGALG00000001420 5112 0.853 - - - - - - 0.853 - - - Ral GTPase activating protein non-catalytic beta subunit [Source:NCBI gene;Acc:419128]
98. TSPAN3 ENSGALG00000002774 28811 0.85 - - - - - - - 0.850 - - tetraspanin 3 [Source:NCBI gene;Acc:415348]
99. CHST6 ENSGALG00000000913, ENSGALG00000036545 7526 0.846 - - - - - - - 0.846 - - carbohydrate sulfotransferase 6 [Source:NCBI gene;Acc:770257]
100. PDCL3 ENSGALG00000016772 14897 0.843 - - - - - - 0.843 - - - phosducin like 3 [Source:NCBI gene;Acc:418709]

There are 214 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA