Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TUBB3

Gene Name Gene ID Reads Annotation
TUBB3 571 tubulin beta 3 class III











Genes with expression patterns similar to TUBB3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TUBB3 571 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tubulin beta 3 class III
2. TEX11 ENSGALG00000005775 58 1.46 - - 0.704 - - - - 0.756 - - testis expressed 11 [Source:HGNC Symbol;Acc:HGNC:11733]
3. ADAMTS18 ENSGALG00000005347 17 1 - - - - - - 1.000 - - - ADAM metallopeptidase with thrombospondin type 1 motif 18 [Source:HGNC Symbol;Acc:HGNC:17110]
4. SOX6 ENSGALG00000006074 102 1 - - - - - - 1.000 - - - Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
5. LRRC39 ENSGALG00000005284 5 1 - - - - - - 1.000 - - - leucine rich repeat containing 39 [Source:HGNC Symbol;Acc:HGNC:28228]
6. ENSGALG00000008309 ENSGALG00000008309 7 1 - - - - - - 1.000 - - -
7. CDH9 ENSGALG00000012923 10 1 - - - - - - 1.000 - - - cadherin 9 [Source:HGNC Symbol;Acc:HGNC:1768]
8. RSPH4A RSPH4A 34 1 - - - - - - 1.000 - - -
9. ENSGALG00000019430 ENSGALG00000019430 32 1 - - - - - - 1.000 - - -
10. ABL2 ENSGALG00000030357 39 1 - - - - - - - 1.000 - - ABL proto-oncogene 2, non-receptor tyrosine kinase, transcript variant X2
11. PFKFB2 ENSGALG00000001117 2 1 - - - - - - - 1.000 - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:HGNC Symbol;Acc:HGNC:8873]
12. PDZD3 ENSGALG00000006779 24 1 - - - - - - 1.000 - - - PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:19891]
13. ANKRD55 ENSGALG00000014717 3 1 - - - - - - 1.000 - - - ankyrin repeat domain 55 [Source:HGNC Symbol;Acc:HGNC:25681]
14. UNC13D ENSGALG00000002234 44 1 - - - - - - 1.000 - - - unc-13 homolog D [Source:HGNC Symbol;Acc:HGNC:23147]
15. ENSGALG00000026135 ENSGALG00000026135 16 1 - - - - - - - 1.000 - -
16. MYBPC3 ENSGALG00000008148 315 1 - - - - - - 1.000 - - - myosin binding protein C, cardiac [Source:NCBI gene;Acc:396013]
17. FOXE3 11 1 - - - - - - - 1.000 - - forkhead box E3
18. HLCS ENSGALG00000016047 30 1 - - - - - - 1.000 - - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
19. LOC422926 ENSGALG00000027090 16 1 - - - - - - 1.000 - - - uncharacterized LOC422926
20. LIPI ENSGALG00000015662 4 1 - - - - - - 1.000 - - - lipase member I, transcript variant X1
21. CACNA1I ENSGALG00000035051 27 1 - - - - - - - 1.000 - - calcium voltage-gated channel subunit alpha1 I, transcript variant X3
22. GLYCTK ENSGALG00000004018 5 1 - - - - - - - 1.000 - - glycerate kinase [Source:HGNC Symbol;Acc:HGNC:24247]
23. ENSGALG00000000307 ENSGALG00000000307 29 1 - - - - - - 1.000 - - -
24. TMED6 ENSGALG00000000654 8 1 - - - - - - 1.000 - - - transmembrane p24 trafficking protein 6 [Source:NCBI gene;Acc:101750075]
25. HFM1 ENSGALG00000006091 5 1 - - - - - - 1.000 - - - HFM1, ATP dependent DNA helicase homolog [Source:HGNC Symbol;Acc:HGNC:20193]
26. SLC35A5 11 1 - - - - - - 1.000 - - - solute carrier family 35 member A5, transcript variant X6
27. ACE2 ENSGALG00000016554 7 1 - - - - - - 1.000 - - - angiotensin I converting enzyme 2 [Source:HGNC Symbol;Acc:HGNC:13557]
28. PKDCCB ENSGALG00000011166 74 1 - - - - - - 1.000 - - - protein kinase domain containing, cytoplasmic b
29. WDR65 WDR65 26 1 - - - - - - 1.000 - - -
30. KLF9 ENSGALG00000027374 38 1 - - - - - - 1.000 - - - Kruppel like factor 9 [Source:HGNC Symbol;Acc:HGNC:1123]
31. TRERF1 ENSGALG00000009896 42 1 - - - - - - - 1.000 - - transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
32. TPK1 ENSGALG00000040298 74 1 - - - - - - 1.000 - - - thiamin pyrophosphokinase 1 [Source:HGNC Symbol;Acc:HGNC:17358]
33. GPR114 GPR114 46 1 - - - - - - 1.000 - - -
34. MEGF6L ENSGALG00000009458 14 1 - - - - - - 1.000 - - - multiple EGF-like-domains 6-like, transcript variant X21
35. TRIM66 ENSGALG00000005958 5 1 - - - - - - 1.000 - - - tripartite motif containing 66 [Source:HGNC Symbol;Acc:HGNC:29005]
36. HELB ENSGALG00000009885 8 1 - - - - - - 1.000 - - - DNA helicase B [Source:HGNC Symbol;Acc:HGNC:17196]
37. MYH13 4 1 - - - - - - - 1.000 - - myosin, heavy chain 13, skeletal muscle
38. OCM2 ENSGALG00000003465 74 1 - - - - - - 1.000 - - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
39. COMMD6 ENSGALG00000016922 24 1 - - - - - - 1.000 - - - COMM domain containing 6 [Source:HGNC Symbol;Acc:HGNC:24015]
40. SLC16A6 ENSGALG00000004162 21 1 - - - - - - 1.000 - - - solute carrier family 16 member 6 [Source:HGNC Symbol;Acc:HGNC:10927]
41. KLHDC10 ENSGALG00000008013 4 1 - - - - - - 1.000 - - - kelch domain containing 10 [Source:HGNC Symbol;Acc:HGNC:22194]
42. RHCG ENSGALG00000006635 7 1 - - - - - - 1.000 - - - Rh family C glycoprotein [Source:NCBI gene;Acc:415490]
43. GP9 GP9 6 1 - - - - - - 1.000 - - -
44. TSNAXIP1 ENSGALG00000001533 9 1 - - - - - - 1.000 - - - translin associated factor X interacting protein 1, transcript variant X2
45. RGMB ENSGALG00000015284 14 1 - - - - - - 1.000 - - - repulsive guidance molecule BMP co-receptor b [Source:HGNC Symbol;Acc:HGNC:26896]
46. gga-mir-6585 ENSGALG00000027202 102 1 - - - - - - 1.000 - - - gga-mir-6585 [Source:miRBase;Acc:MI0022405]
47. ENSGALG00000015888 ENSGALG00000015888 12 1 - - - - - - 1.000 - - -
48. OIP5 ENSGALG00000008579 27 1 - - - - - - 1.000 - - - Opa interacting protein 5 [Source:NCBI gene;Acc:423212]
49. CMTM4 ENSGALG00000005251 5 1 - - - - - - 1.000 - - - CKLF like MARVEL transmembrane domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19175]
50. SENP7 ENSGALG00000044642 48 1 - - - - - - 1.000 - - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
51. SLC2A5 ENSGALG00000002466 26 1 - - - - - - 1.000 - - - solute carrier family 2 member 5 [Source:HGNC Symbol;Acc:HGNC:11010]
52. PLXNA4 ENSGALG00000006473 125 0.996 - - - - - - - 0.996 - - plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
53. GALNT11 ENSGALG00000006233 210 0.994 - - - - - - - 0.994 - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
54. STARD10 ENSGALG00000002577 245 0.984 - - - - - - - 0.984 - - StAR related lipid transfer domain containing 10
55. GK ENSGALG00000016285 35 0.973 - - - - - - - 0.973 - - glycerol kinase, transcript variant X4
56. gga-mir-1466 ENSGALG00000025170 487 0.967 - - - - - - - 0.967 - - gga-mir-1466 [Source:miRBase;Acc:MI0007071]
57. SS4R SS4R 19 0.967 - - - - - - - 0.967 - -
58. TPH2 ENSGALG00000010198 5 0.967 - - - - - - - 0.967 - - tryptophan hydroxylase 2 [Source:NCBI gene;Acc:408026]
59. GPHB5 ENSGALG00000028839 45 0.965 - - - - - - - 0.965 - - glycoprotein hormone beta 5 [Source:HGNC Symbol;Acc:HGNC:18055]
60. UBA2 ENSGALG00000005006 243 0.959 - - - - - - - 0.959 - - ubiquitin like modifier activating enzyme 2 [Source:NCBI gene;Acc:415784]
61. EPB41L5 ENSGALG00000011605 18 0.927 - - - - - - - 0.927 - - erythrocyte membrane protein band 4.1 like 5 [Source:HGNC Symbol;Acc:HGNC:19819]
62. FMOD ENSGALG00000034067 165 0.919 - - - - - - - 0.919 - - fibromodulin [Source:NCBI gene;Acc:395814]
63. OXR1 44 0.917 - - - - - - - 0.917 - - oxidation resistance 1, transcript variant X7
64. STXBP5L ENSGALG00000032361 41 0.913 - - - - - - - 0.913 - - syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
65. RAB40B ENSGALG00000001545 8 0.909 - - - - - - - 0.909 - - RAB40B, member RAS oncogene family [Source:NCBI gene;Acc:417338]
66. ANKEF1 ENSGALG00000008996 12 0.903 - - - - - - - 0.903 - - ankyrin repeat and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15803]
67. RGR ENSGALG00000002299 17 0.888 - - - - 0.888 - - - - - retinal G protein coupled receptor [Source:NCBI gene;Acc:423619]
68. ENSGALG00000025761 ENSGALG00000025761 6 0.888 - - - - 0.888 - - - - -
69. GPCPD1 ENSGALG00000009130 24 0.876 - - - - 0.876 - - - - - Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318987]
70. BPIFB7 BPIFB7 22 0.867 - - - 0.867 - - - - - -
71. TNFAIP8L3 ENSGALG00000004788 1 0.867 - - - 0.867 - - - - - - TNF alpha induced protein 8 like 3, transcript variant X1
72. AGPAT4 ENSGALG00000011571 4 0.867 - - - 0.867 - - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:20885]
73. DVL3 ENSGALG00000008414 38 0.864 - - - - - - - 0.864 - - dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
74. FAM173A ENSGALG00000021364 4 0.863 - - - - - - - 0.863 - - family with sequence similarity 173 member A [Source:NCBI gene;Acc:416404]
75. PPM1A ENSGALG00000011917 281 0.861 - - - - 0.861 - - - - - protein phosphatase, Mg2+/Mn2+ dependent 1A [Source:HGNC Symbol;Acc:HGNC:9275]
76. PIRT 41 0.86 - - - - 0.860 - - - - - phosphoinositide-interacting regulator of transient receptor potential channels
77. SEZ6L ENSGALG00000032415 56 0.854 - - - - 0.854 - - - - - seizure related 6 homolog like [Source:HGNC Symbol;Acc:HGNC:10763]
78. CIT ENSGALG00000007354 150 0.854 - - - - - - - 0.854 - - citron rho-interacting serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1985]
79. STEAP2 ENSGALG00000009017 10 0.853 - - - - - - - 0.853 - - STEAP2 metalloreductase [Source:HGNC Symbol;Acc:HGNC:17885]
80. UNC13C ENSGALG00000035935 120 0.843 - - - - - - - 0.843 - - unc-13 homolog C [Source:HGNC Symbol;Acc:HGNC:23149]
81. ATP6V1AL ENSGALG00000000048 21 0.841 - - - - 0.841 - - - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
82. CACNA1E ENSGALG00000003833 112 0.828 - - - - - - - 0.828 - - calcium voltage-gated channel subunit alpha1 E [Source:HGNC Symbol;Acc:HGNC:1392]
83. NUDCD3 ENSGALG00000038299 2691 0.822 - - - - - 0.822 - - - - NudC domain containing 3 [Source:HGNC Symbol;Acc:HGNC:22208]
84. SPAG6 ENSGALG00000007892 80 0.821 - - - - - - - 0.821 - - sperm associated antigen 6 [Source:NCBI gene;Acc:420505]
85. KCNH5 ENSGALG00000011858 24 0.821 - - - - - - - 0.821 - - potassium voltage-gated channel subfamily H member 5 [Source:HGNC Symbol;Acc:HGNC:6254]
86. PRSS12 ENSGALG00000012004 53 0.816 - - - - - - - 0.816 - - serine protease 12 [Source:HGNC Symbol;Acc:HGNC:9477]
87. MAPKAP1 ENSGALG00000000977 193 0.81 - - - - - - - 0.810 - - mitogen-activated protein kinase associated protein 1 [Source:NCBI gene;Acc:395627]
88. SUPT20H ENSGALG00000017047 59 0.81 - - - - 0.810 - - - - - SPT20 homolog, SAGA complex component [Source:NCBI gene;Acc:418896]
89. EVA1CL ENSGALG00000004734 168 0.806 - - 0.806 - - - - - - - protein eva-1 homolog C-like, transcript variant X2
90. TPTE2 ENSGALG00000017031 29 0.799 - - 0.799 - - - - - - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
91. CAPN6 ENSGALG00000008006 16 0.799 - - 0.799 - - - - - - - calpain 6 [Source:HGNC Symbol;Acc:HGNC:1483]
92. SP2 ENSGALG00000000233 43 0.798 - - 0.798 - - - - - - - Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
93. NEFM ENSGALG00000000317 6992 0.798 - - - - - - - - - 0.798 neurofilament medium [Source:NCBI gene;Acc:396206]
94. CRAT ENSGALG00000037443 78 0.795 - - 0.795 - - - - - - - carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
95. MYT1 ENSGALG00000005932 2017 0.792 - - - - - - - - - 0.792 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
96. TMEM8C ENSGALG00000021520 30 0.791 - - - - - - 0.791 - - - Gallus gallus transmembrane protein 8C (TMEM8C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318457]
97. XK ENSGALG00000016262 60 0.788 - - - - - - - 0.788 - - X-linked Kx blood group [Source:NCBI gene;Acc:427991]
98. EVI2A ENSGALG00000039084 13 0.785 - - - - - - - 0.785 - - ecotropic viral integration site 2A [Source:NCBI gene;Acc:776037]
99. KIAA1841 ENSGALG00000007825 22 0.785 - - 0.785 - - - - - - - KIAA1841 [Source:NCBI gene;Acc:421196]
100. ISL1 ENSGALG00000014884 7666 0.784 - - - - - - - - - 0.784 ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]

There are 113 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA