Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TUBA1A

Gene Name Gene ID Reads Annotation
TUBA1A ENSDARG00000001889 25294 tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]










Genes with expression patterns similar to TUBA1A

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. TUBA1A ENSDARG00000001889 25294 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
2. myt1b ENSDARG00000102879 5411 4.217 0.774 - - 0.766 - 0.992 0.962 0.723 - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
3. stmn1b ENSDARG00000033655 9491 4.194 0.762 - - 0.844 - 0.867 0.978 0.743 - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
4. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 4.187 0.779 - - 0.714 - 0.957 0.872 0.865 - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
5. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 4.065 0.734 - - 0.792 - 0.827 0.945 0.767 - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
6. sox2 ENSDARG00000070913 2763 4.043 0.753 - - 0.771 - 0.715 0.968 0.836 - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
7. nova2 ENSDARG00000017673 7685 3.546 0.795 - - 0.789 - 0.973 0.989 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
8. nes ENSDARG00000088805 2710 3.542 0.794 - - 0.845 - 0.921 0.982 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
9. eno2 ENSDARG00000014287 2162 3.533 0.739 - - - - 0.927 0.988 - 0.879 enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
10. pcdh1gc5 ENSDARG00000104826 10052 3.498 0.792 - - 0.744 - 0.972 0.990 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
11. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 3.46 0.784 - - 0.731 - 0.977 0.968 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
12. tuba1c ENSDARG00000055216 8384 3.457 0.808 - - - - 0.973 0.971 0.705 - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
13. nadl1.1 1200 3.443 0.808 - - - - 0.955 0.974 0.706 - neural adhesion molecule L1.1, transcript variant X1
14. nrarpb ENSDARG00000018958 6225 3.424 0.725 - - 0.752 - 0.957 0.990 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
15. bhlhe22 ENSDARG00000058039 1673 3.393 0.787 - - - - 0.775 0.945 - 0.886 basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
16. stmn2b ENSDARG00000070537 1586 3.381 0.781 - - - - 0.942 0.831 0.827 - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
17. her2 ENSDARG00000038205 3219 3.355 0.834 - - 0.826 - 0.713 0.982 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
18. tubb5 ENSDARG00000037997 18691 3.342 0.752 - - 0.834 - - 0.957 0.799 - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
19. fyna ENSDARG00000011370 1679 3.33 0.784 - - 0.769 - 0.859 0.918 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
20. slc1a2b ENSDARG00000102453 3136 3.297 - - - 0.741 - 0.924 0.919 0.713 - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
21. fzd3a ENSDARG00000021664 1958 3.285 0.812 - - - - 0.825 0.926 0.722 - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
22. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 3.284 0.732 - - 0.732 - 0.940 - 0.880 - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
23. btg2 ENSDARG00000020298 6616 3.224 - - 0.703 0.724 - 0.947 0.850 - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
24. tmpob ENSDARG00000022978 8121 3.167 - - - 0.707 - 0.809 0.871 0.780 - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
25. CABZ01028287.1 CABZ01028287.1 626 3.094 0.718 - - 0.798 - 0.724 0.854 - -
26. gfap ENSDARG00000025301 5584 2.785 0.821 - - - - 0.988 0.976 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
27. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.732 0.805 - - - - 0.944 0.983 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
28. vim ENSDARG00000010008 3551 2.727 0.835 - - - - 0.957 0.935 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
29. slc18a3a ENSDARG00000006356 1285 2.717 0.761 - - - - 0.968 0.988 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
30. si:ch73-21g5.7 ENSDARG00000093156 9412 2.713 0.828 - - - - 0.896 0.989 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
31. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.71 0.787 - - - - 0.955 0.968 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
32. stx1b ENSDARG00000000503 2724 2.705 0.785 - - - - 0.969 0.951 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
33. plp1a ENSDARG00000103732 3544 2.702 0.777 - - - - 0.940 0.985 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
34. mllt11 ENSDARG00000071026 2518 2.702 0.782 - - - - 0.966 0.954 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
35. EFCC1 ENSDARG00000077826 1359 2.697 0.842 - - - - 0.931 0.924 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
36. syt11a ENSDARG00000057913 1145 2.696 0.809 - - - - 0.913 0.974 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
37. atp6v0cb ENSDARG00000036577 3472 2.695 0.734 - - - - 0.970 0.991 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
38. pcsk1nl ENSDARG00000076170 1232 2.693 0.811 - - - - 0.909 0.973 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
39. epha4b ENSDARG00000011600 3110 2.69 0.814 - - - - 0.921 0.955 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
40. ptprna ENSDARG00000058646 1327 2.689 - - - 0.787 - 0.944 0.958 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
41. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.689 0.824 - - - - 0.925 0.940 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
42. BX957337.1 BX957337.1 1685 2.672 0.778 - - - - 0.945 0.949 - -
43. neurog1 ENSDARG00000056130 3924 2.671 0.802 - - - - 0.884 0.985 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
44. vgf ENSDARG00000105529 247 2.665 0.767 - - - - 0.924 0.974 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
45. TUBB8P7_1 TUBB8P7_1 2722 2.658 0.762 - - - - 0.939 0.957 - -
46. pax6a ENSDARG00000103379 3061 2.652 0.798 - - - - 0.948 0.906 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
47. SPOCK1 ENSDARG00000074644 794 2.651 0.782 - - - - 0.886 0.983 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
48. mir10d-1 mir10d-1 860 2.65 0.771 - - - - 0.940 0.939 - -
49. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.65 - - - 0.820 - 0.920 0.910 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
50. slc1a3a ENSDARG00000104431 9888 2.646 0.725 - - - - 0.960 0.961 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
51. nhlh2 ENSDARG00000025495 1860 2.645 - - - - - 0.802 0.984 0.859 - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
52. stxbp1a ENSDARG00000001994 5154 2.639 0.753 - - - - 0.925 0.961 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
53. AGO1 ENSDARG00000092644 4521 2.637 0.761 - - - - 0.913 0.963 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
54. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 2.637 - - - 0.737 - 0.928 0.972 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
55. irx1b ENSDARG00000056594 2224 2.632 0.755 - - - - 0.892 0.985 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
56. hmp19 2554 2.627 0.720 - - - - 0.929 0.978 - - HMP19 protein
57. SEMA7A ENSDARG00000078707 465 2.627 0.728 - - - - 0.966 0.933 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
58. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.626 0.764 - - - - 0.920 0.942 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
59. ckbb ENSDARG00000043257 3503 2.623 0.758 - - - - 0.946 0.919 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
60. kcnc3a ENSDARG00000055855 1821 2.621 0.725 - - - - 0.952 0.944 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
61. snap25a ENSDARG00000020609 4537 2.62 0.731 - - - - 0.955 0.934 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
62. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.611 0.807 - - 0.815 - - 0.989 - - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
63. CU928222.1 ENSDARG00000097436 1662 2.604 0.756 - - - - 0.870 0.978 - -
64. ncana 1537 2.598 0.726 - - - - 0.927 0.945 - - neurocan a
65. hmgb3a ENSDARG00000056725 15668 2.597 - - - - - 0.958 0.890 0.749 - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
66. map7d2a ENSDARG00000068480 513 2.592 0.770 - - - - 0.907 0.915 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
67. hnrnpub ENSDARG00000004735 16496 2.588 - - - 0.835 - 0.860 0.893 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
68. tox ENSDARG00000032317 9126 2.586 0.750 - - - - 0.879 0.957 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
69. scrt2 ENSDARG00000056175 4331 2.582 0.732 - - - - 0.970 0.880 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
70. prrt1 ENSDARG00000062208 368 2.581 0.738 - - - - 0.870 0.973 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
71. relnl relnl 863 2.58 - - - 0.751 - 0.964 0.865 - -
72. atp1b4 ENSDARG00000053262 1337 2.579 0.731 - - - - 0.924 0.924 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
73. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.579 0.714 - - - - - 0.993 0.872 - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
74. tmem35 ENSDARG00000052567 5685 2.575 - - - 0.718 - 0.885 0.972 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
75. UBE2QL1 ENSDARG00000079276 3474 2.573 0.764 - - - - 0.892 0.917 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
76. rtn1b ENSDARG00000021143 1682 2.569 0.731 - - - - 0.936 0.902 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
77. scn8aa ENSDARG00000005775 792 2.568 0.717 - - - - 0.939 0.912 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
78. sncgb ENSDARG00000109715 1014 2.565 0.731 - - - - 0.941 0.893 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
79. ROBO3_1 ROBO3_1 468 2.56 0.714 - - - - 0.905 0.941 - -
80. clstn3 ENSDARG00000073883 590 2.557 0.746 - - - - 0.911 0.900 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
81. tmie ENSDARG00000069423 305 2.556 0.818 - - - - 0.780 0.958 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
82. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.553 0.811 - - - - 0.904 0.838 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
83. slc8a2b ENSDARG00000100592 598 2.55 0.787 - - - - 0.792 0.971 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
84. EPB41L1 EPB41L1 1896 2.549 0.749 - - - - 0.883 0.917 - -
85. C8H1orf106 C8H1orf106 2690 2.547 0.779 - - - - 0.819 0.949 - -
86. cadm3 ENSDARG00000057013 1545 2.547 - - - - - 0.966 0.869 0.712 - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
87. CABZ01111990.1 CABZ01111990.1 4374 2.542 0.732 - - - - 0.839 0.971 - -
88. elavl3 ENSDARG00000014420 8644 2.54 0.700 - - - - 0.854 0.986 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
89. amph ENSDARG00000007663 599 2.539 0.706 - - - - 0.908 0.925 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
90. nbeaa ENSDARG00000070080 862 2.535 0.776 - - - - 0.810 0.949 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
91. CHL1 CHL1 1553 2.531 0.747 - - - - 0.882 0.902 - -
92. sox19b ENSDARG00000040266 532 2.527 0.804 - - - - 0.795 0.928 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
93. dpysl5a ENSDARG00000011141 1827 2.527 0.710 - - - - 0.869 0.948 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
94. clstn1 ENSDARG00000031720 5286 2.525 0.758 - - - - 0.823 0.944 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
95. hoxa5a ENSDARG00000102501 1667 2.524 0.802 - - - - 0.891 0.831 - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
96. cnrip1a ENSDARG00000091683 1491 2.524 0.755 - - - - 0.788 0.981 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
97. spock3 ENSDARG00000070266, ENSDARG00000110158 934 2.52 0.736 - - - - 0.950 0.834 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
98. gng3 ENSDARG00000009553 2530 2.519 0.772 - - - - 0.775 0.972 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
99. negr1 ENSDARG00000021607 1051 2.518 0.715 - - - - 0.884 0.919 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
100. ppp3ca ENSDARG00000004988 615 2.516 0.725 - - - - 0.882 0.909 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]

There are 1635 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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