Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TUB

Gene Name Gene ID Reads Annotation
TUB ENSGALG00000005986 85 tubby bipartite transcription factor [Source:HGNC Symbol;Acc:HGNC:12406]











Genes with expression patterns similar to TUB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TUB ENSGALG00000005986 85 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 tubby bipartite transcription factor [Source:HGNC Symbol;Acc:HGNC:12406]
2. SORL1 ENSGALG00000006598 39 1.731 - - - - - - - 0.980 - 0.751 sortilin related receptor 1 [Source:NCBI gene;Acc:395998]
3. GPCPD1 ENSGALG00000009130 24 1.697 - - 0.717 - - - - 0.980 - - Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318987]
4. SVOPL ENSGALG00000012812 27 1.63 - - 0.707 - - - - 0.923 - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
5. CCNO ENSGALG00000028595 68 1.476 - - - - - 0.742 - 0.734 - - cyclin O [Source:HGNC Symbol;Acc:HGNC:18576]
6. ENSGALG00000019568 ENSGALG00000019568 25 1.41 - - 0.703 - - - 0.707 - - -
7. ANKFN1 ENSGALG00000003105 15 1 - - - - - - - 1.000 - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
8. LMX1B ENSGALG00000040582 34 1 - - - - - - - 1.000 - - LIM homeobox transcription factor 1 beta [Source:NCBI gene;Acc:396312]
9. RAB13 RAB13 22 1 - - - - - - - 1.000 - -
10. DDX11 49 1 - - - - - - - 1.000 - - DEAD/H-box helicase 11, transcript variant X1
11. STRADB ENSGALG00000008373 10 0.98 - - - - - - - 0.980 - - STE20-related kinase adaptor beta [Source:HGNC Symbol;Acc:HGNC:13205]
12. SASH1 ENSGALG00000012342 28 0.98 - - - - - - - 0.980 - - SAM and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19182]
13. DRG11 DRG11 32 0.98 - - - - - - - 0.980 - -
14. CATHL1 ENSGALG00000027973 98 0.98 - - - - - - - 0.980 - - cathelicidin-1 [Source:NCBI gene;Acc:414337]
15. BAI3 BAI3 106 0.98 - - - - - - - 0.980 - -
16. STK38 ENSGALG00000000523 44 0.98 - - - - - - - 0.980 - - serine/threonine kinase 38 [Source:HGNC Symbol;Acc:HGNC:17847]
17. PLCE1 ENSGALG00000039528 151 0.956 - - - - - - - 0.956 - - phospholipase C epsilon 1
18. SLC10A4 ENSGALG00000033908 300 0.923 - - - - - - - 0.923 - - solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
19. ST3GAL2 ENSGALG00000002651 20 0.923 - - - - - - - 0.923 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:NCBI gene;Acc:395139]
20. IL2RB ENSGALG00000012472 7 0.923 - - - - - - - 0.923 - - Gallus gallus interleukin 2 receptor subunit beta (IL2RB), mRNA. [Source:RefSeq mRNA;Acc:NM_001318989]
21. SLCO2A1 ENSGALG00000006471 18 0.923 - - - - - - - 0.923 - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
22. LZTS2 ENSGALG00000023612 9 0.923 - - - - - - - 0.923 - - leucine zipper tumor suppressor 2 [Source:HGNC Symbol;Acc:HGNC:29381]
23. HOPX ENSGALG00000011404 10 0.923 - - - - - - - 0.923 - - HOP homeobox [Source:NCBI gene;Acc:395241]
24. MIS18A ENSGALG00000015884 25 0.923 - - - - - - - 0.923 - - MIS18 kinetochore protein A [Source:HGNC Symbol;Acc:HGNC:1286]
25. HPDL ENSGALG00000023348 1 0.923 - - - - - - - 0.923 - - 4-hydroxyphenylpyruvate dioxygenase like [Source:HGNC Symbol;Acc:HGNC:28242]
26. GRIA4 ENSGALG00000038995 29 0.923 - - - - - - - 0.923 - - glutamate ionotropic receptor AMPA type subunit 4 [Source:NCBI gene;Acc:396137]
27. HMGCS2 ENSGALG00000002960 54 0.923 - - - - - - - 0.923 - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
28. PROZ ENSGALG00000016832 6 0.923 - - - - - - - 0.923 - - protein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]
29. ATP6V1H ENSGALG00000013621 13 0.923 - - - - - - - 0.923 - - ATPase H+ transporting V1 subunit H [Source:NCBI gene;Acc:426199]
30. ENSGALG00000005026 ENSGALG00000005026 9 0.923 - - - - - - - 0.923 - -
31. ENSGALG00000026578 ENSGALG00000026578 4 0.923 - - - - - - - 0.923 - -
32. CAMK2A ENSGALG00000005621 3 0.923 - - - - - - - 0.923 - - calcium/calmodulin dependent protein kinase II alpha [Source:NCBI gene;Acc:374175]
33. PREX1 ENSGALG00000004621 48 0.923 - - - - - - - 0.923 - - phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:32594]
34. gga-mir-99a ENSGALG00000018242 192 0.923 - - - - - - - 0.923 - - gga-mir-99a [Source:miRBase;Acc:MI0001173]
35. OVCH2 ENSGALG00000005318 8 0.923 - - - - - - - 0.923 - - ovochymase 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:29970]
36. MCAM ENSGALG00000030027 26 0.923 - - - - - - - 0.923 - - melanoma cell adhesion molecule [Source:NCBI gene;Acc:448832]
37. SLC44A1 ENSGALG00000015439 32 0.923 - - - - - - - 0.923 - - solute carrier family 44 member 1 [Source:HGNC Symbol;Acc:HGNC:18798]
38. C8orf37 ENSGALG00000038971 5 0.923 - - - - - - - 0.923 - - chromosome 8 open reading frame 37 [Source:HGNC Symbol;Acc:HGNC:27232]
39. HHAT ENSGALG00000009881 7 0.923 - - - - - - - 0.923 - - hedgehog acyltransferase [Source:HGNC Symbol;Acc:HGNC:18270]
40. REEP1 ENSGALG00000015786 7 0.923 - - - - - - - 0.923 - - receptor accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:25786]
41. CCR5 ENSGALG00000037077 23 0.923 - - - - - - - 0.923 - - C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]
42. MYRFL ENSGALG00000019352 2 0.923 - - - - - - - 0.923 - - myelin regulatory factor like [Source:HGNC Symbol;Acc:HGNC:26316]
43. GAL4 GAL4 2 0.923 - - - - - - - 0.923 - -
44. FAM166A ENSGALG00000045172 0 0.923 - - - - - - - 0.923 - - family with sequence similarity 166 member A [Source:HGNC Symbol;Acc:HGNC:33818]
45. SOS2 ENSGALG00000012273 41 0.923 - - - - - - - 0.923 - - SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
46. TM6SF2 ENSGALG00000029015 109 0.923 - - - - - - - 0.923 - - transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
47. GTF2E1L ENSGALG00000013600 4 0.923 - - - - - - - 0.923 - - general transcription factor IIE subunit 1-like
48. CR1L ENSGALG00000023950 98 0.923 - - - - - - - 0.923 - - complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
49. DYDC1 ENSGALG00000002432 54 0.923 - - - - - - - 0.923 - - DPY30 domain containing 1 [Source:NCBI gene;Acc:423627]
50. ITM2B ENSGALG00000016996 1112 0.923 - - - - - - - 0.923 - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
51. NR4A3 ENSGALG00000013568 1 0.923 - - - - - - - 0.923 - - nuclear receptor subfamily 4 group A member 3 [Source:HGNC Symbol;Acc:HGNC:7982]
52. ENSGALG00000024369 ENSGALG00000024369 4 0.923 - - - - - - - 0.923 - -
53. GSTT1 ENSGALG00000006344 22 0.923 - - - - - - - 0.923 - - glutathione S-transferase theta 1 [Source:NCBI gene;Acc:396322]
54. VSNL1 ENSGALG00000016464 19 0.923 - - - - - - - 0.923 - - visinin like 1 [Source:NCBI gene;Acc:396189]
55. SPAG8 2 0.923 - - - - - - - 0.923 - - sperm associated antigen 8, transcript variant X3
56. UTS2 ENSGALG00000000556 0 0.923 - - - - - - - 0.923 - - urotensin 2 [Source:NCBI gene;Acc:404535]
57. HERPUD1 ENSGALG00000001220 18 0.923 - - - - - - - 0.923 - - homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
58. PLCH2 ENSGALG00000001207 7 0.923 - - - - - - - 0.923 - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
59. SLC1A2 ENSGALG00000037556 22 0.923 - - - - - - - 0.923 - - solute carrier family 1 member 2 [Source:NCBI gene;Acc:423156]
60. ANKRD42 8 0.923 - - - - - - - 0.923 - - ankyrin repeat domain 42
61. TVB TVB 11 0.923 - - - - - - - 0.923 - -
62. ANKFY1 ENSGALG00000001467 21 0.923 - - - - - - - 0.923 - - ankyrin repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20763]
63. LRRC3B ENSGALG00000011314 26 0.906 - - - - - - - 0.906 - - leucine rich repeat containing 3B [Source:HGNC Symbol;Acc:HGNC:28105]
64. PLEKHA6 ENSGALG00000038399 182 0.879 - - 0.879 - - - - - - - pleckstrin homology domain containing A6 [Source:HGNC Symbol;Acc:HGNC:17053]
65. TRPC2L ENSGALG00000017493 28 0.878 - - 0.878 - - - - - - - Putative short transient receptor potential channel 2-like protein
66. ENSGALG00000005445 ENSGALG00000005445 16 0.863 - - - - - - - 0.863 - -
67. HDAC10 ENSGALG00000041251 57 0.855 - - - - - - - 0.855 - - histone deacetylase 10 [Source:HGNC Symbol;Acc:HGNC:18128]
68. NTRK2 ENSGALG00000012594 24 0.855 - - - - - - - 0.855 - - neurotrophic receptor tyrosine kinase 2 [Source:NCBI gene;Acc:396157]
69. SK2 SK2 74 0.843 - - - - - - - 0.843 - -
70. TMC1 ENSGALG00000015145 1180 0.837 - - 0.837 - - - - - - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
71. HOXD11 ENSGALG00000039629 658 0.836 - - - - - - - 0.836 - - homeobox D11 [Source:NCBI gene;Acc:395328]
72. FMN2 ENSGALG00000031427 77 0.828 - - - 0.828 - - - - - - formin 2 [Source:HGNC Symbol;Acc:HGNC:14074]
73. PNLDC1 ENSGALG00000011624 150 0.812 - - 0.812 - - - - - - - PARN like, ribonuclease domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21185]
74. CARD9 ENSGALG00000001889 83 0.809 - - - - - - - - - 0.809 caspase recruitment domain family member 9 [Source:HGNC Symbol;Acc:HGNC:16391]
75. SYNJ2BP ENSGALG00000009387, ENSGALG00000035537 124 0.808 - - - - - - - 0.808 - - synaptojanin 2 binding protein, transcript variant X2
76. RAP2A ENSGALG00000016889 26 0.8 - - - - - 0.800 - - - - RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9861]
77. PWP2 60 0.798 - - - - - - - 0.798 - - PWP2, small subunit processome component
78. STOX1 330 0.796 - - 0.796 - - - - - - - storkhead box 1, transcript variant X3
79. ARHGAP15 ENSGALG00000012421 58 0.791 - - - - - - - - - 0.791 Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
80. TSPAN4 ENSGALG00000006837 150 0.789 - - - - - 0.789 - - - - tetraspanin 4 [Source:HGNC Symbol;Acc:HGNC:11859]
81. CNTN2 ENSGALG00000000653 219 0.789 - - - 0.789 - - - - - - contactin 2 [Source:NCBI gene;Acc:419825]
82. SPRTN ENSGALG00000011065 24 0.788 - - - - - - - 0.788 - - SprT-like N-terminal domain [Source:HGNC Symbol;Acc:HGNC:25356]
83. POPDC2 ENSGALG00000014988 281 0.786 - - - - - 0.786 - - - - popeye domain containing 2 [Source:NCBI gene;Acc:404229]
84. COL24A1 ENSGALG00000006864 161 0.78 - - - - - - - 0.780 - - collagen type XXIV alpha 1 chain, transcript variant X4
85. gga-mir-1725 gga-mir-1725 178 0.776 - - - - - - - 0.776 - -
86. ZNF407 ENSGALG00000036128, ENSGALG00000041358 138 0.775 - - - - - - - - - 0.775 zinc finger protein 407 [Source:HGNC Symbol;Acc:HGNC:19904]
87. CLGN ENSGALG00000009826 54 0.772 - - - - - - - - - 0.772 calmegin [Source:HGNC Symbol;Acc:HGNC:2060]
88. LACE1 LACE1 74 0.771 - - - - - - - 0.771 - -
89. RFXAP ENSGALG00000019087 37 0.771 - - - - - - - 0.771 - - regulatory factor X associated protein [Source:HGNC Symbol;Acc:HGNC:9988]
90. STXBP5L ENSGALG00000032361 41 0.771 - - - - - - - - - 0.771 syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
91. GP130 GP130 42 0.77 - - - - - - - - - 0.770
92. RASAL2 ENSGALG00000004323 55 0.769 - - - - - - - 0.769 - - RAS protein activator like 2 [Source:HGNC Symbol;Acc:HGNC:9874]
93. AMN1 ENSGALG00000012938 83 0.769 - - - - 0.769 - - - - - antagonist of mitotic exit network 1 homolog [Source:HGNC Symbol;Acc:HGNC:27281]
94. MYOG ENSGALG00000000172 460 0.766 - - - - - - - - - 0.766 myogenin [Source:NCBI gene;Acc:374004]
95. CACNB2 ENSGALG00000008591 53 0.765 - - - - 0.765 - - - - - calcium voltage-gated channel auxiliary subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:1402]
96. C3H20ORF72 C3H20ORF72 442 0.765 - - 0.765 - - - - - - -
97. SERPINF1 ENSGALG00000003015 5123 0.759 - - - - - - - - - 0.759 serpin family F member 1 [Source:NCBI gene;Acc:417561]
98. CTH ENSGALG00000011331 2390 0.755 - - - - - - - 0.755 - - cystathionine gamma-lyase [Source:HGNC Symbol;Acc:HGNC:2501]
99. AMY2A ENSGALG00000038740 102 0.755 - - - - - - - 0.755 - - amylase, alpha 2A (pancreatic) [Source:NCBI gene;Acc:414140]
100. FSD1L ENSGALG00000015442 106 0.755 - - - - - - - 0.755 - - fibronectin type III and SPRY domain containing 1 like [Source:HGNC Symbol;Acc:HGNC:13753]

There are 64 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA