Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TTF1

Gene Name Gene ID Reads Annotation
TTF1 ENSDARG00000091967 307 transcription termination factor, RNA polymerase I [Source:ZFIN;Acc:ZDB-GENE-030131-6913]










Genes with expression patterns similar to TTF1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. TTF1 ENSDARG00000091967 307 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transcription termination factor, RNA polymerase I [Source:ZFIN;Acc:ZDB-GENE-030131-6913]
2. zgc:173709 86 1.527 - 0.765 - - 0.762 - - - - zgc:173709
3. wbscr22 wbscr22 644 1.511 - 0.752 - - 0.759 - - - -
4. crsp7 ENSDARG00000105102 1169 1.5 - 0.750 - - - - 0.750 - - cofactor required for Sp1 transcriptional activation, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2005]
5. NUFIP1 ENSDARG00000101024 229 1.455 - 0.754 - - - - 0.701 - - nuclear fragile X mental retardation protein interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6203]
6. BX539313.4 BX539313.4 1858 1.433 0.702 0.731 - - - - - - -
7. PTGER3 ENSDARG00000055781 187 0.904 - - - - - - 0.904 - - prostaglandin E receptor 3 (subtype EP3) [Source:ZFIN;Acc:ZDB-GENE-120508-5]
8. ampd1 ENSDARG00000033832 221 0.89 - - - - - 0.890 - - - adenosine monophosphate deaminase 1 (isoform M) [Source:ZFIN;Acc:ZDB-GENE-040426-1906]
9. dnajb1a ENSDARG00000099383 871 0.889 - - - - - - 0.889 - - DnaJ (Hsp40) homolog, subfamily B, member 1a [Source:ZFIN;Acc:ZDB-GENE-040801-90]
10. xpc ENSDARG00000039754 515 0.874 - 0.874 - - - - - - - xeroderma pigmentosum, complementation group C [Source:ZFIN;Acc:ZDB-GENE-030131-8461]
11. fkbp1b ENSDARG00000052625 883 0.872 - 0.872 - - - - - - - FK506 binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1785]
12. wu:fc75a09 ENSDARG00000111625 289 0.869 - - - - - - 0.869 - - wu:fc75a09 [Source:ZFIN;Acc:ZDB-GENE-030131-4139]
13. ube2d4 ENSDARG00000015057 1089 0.866 - 0.866 - - - - - - - ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]
14. hspg2 ENSDARG00000076564 3440 0.859 - 0.859 - - - - - - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
15. rab3ip ENSDARG00000101908 556 0.855 - - - - - - 0.855 - - RAB3A interacting protein (rabin3) [Source:ZFIN;Acc:ZDB-GENE-050522-323]
16. tmem120a ENSDARG00000030914 273 0.854 - 0.854 - - - - - - - transmembrane protein 120A [Source:ZFIN;Acc:ZDB-GENE-070424-21]
17. oep oep 261 0.853 - 0.853 - - - - - - -
18. ANO8 ANO8 380 0.852 - 0.852 - - - - - - -
19. ctdsplb ENSDARG00000062116 136 0.85 - 0.850 - - - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b [Source:ZFIN;Acc:ZDB-GENE-060929-488]
20. sin3aa ENSDARG00000079716 580 0.85 - - - - - - 0.850 - - SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
21. sfrp1a ENSDARG00000035521 318 0.846 - - - - - 0.846 - - - secreted frizzled-related protein 1a [Source:ZFIN;Acc:ZDB-GENE-040310-5]
22. ntf7 ntf7 72 0.845 - - - - - - 0.845 - -
23. saal1 ENSDARG00000018681, ENSDARG00000109471 480 0.842 - 0.842 - - - - - - - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
24. hsd17b3 ENSDARG00000023287, ENSDARG00000115935, ENSDARG00000116671 134 0.842 - - - - - 0.842 - - - hydroxysteroid (17-beta) dehydrogenase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1339]
25. chad ENSDARG00000045071 903 0.842 - 0.842 - - - - - - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
26. rabggta ENSDARG00000061024 332 0.839 - - - - - - 0.839 - - Rab geranylgeranyltransferase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060929-1042]
27. tmem175 ENSDARG00000076376, ENSDARG00000111449 136 0.836 - 0.836 - - - - - - - transmembrane protein 175 [Source:ZFIN;Acc:ZDB-GENE-070705-79]
28. dhx34 ENSDARG00000061168 349 0.835 - 0.835 - - - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:ZFIN;Acc:ZDB-GENE-061207-30]
29. HECW2 HECW2 691 0.833 - - - - - - 0.833 - -
30. SENP2 ENSDARG00000073837 1411 0.827 - - - - 0.827 - - - - SUMO specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060810-183]
31. senp3b ENSDARG00000056741 1296 0.824 - - - - 0.824 - - - - SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
32. synpo2b ENSDARG00000077157 1009 0.824 - 0.824 - - - - - - - synaptopodin 2b [Source:ZFIN;Acc:ZDB-GENE-101230-1]
33. cthrc1a ENSDARG00000087198 1001 0.822 - 0.822 - - - - - - - collagen triple helix repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-040808-22]
34. GPN1 ENSDARG00000043928 566 0.821 - - - - 0.821 - - - - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
35. atg9a ENSDARG00000044551 179 0.821 - 0.821 - - - - - - - ATG9 autophagy related 9 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070209-65]
36. mettl1 ENSDARG00000076518 366 0.821 - - - - - - 0.821 - - methyltransferase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-24]
37. uri1 ENSDARG00000026664 1474 0.821 - - - - - - 0.821 - - URI1, prefoldin-like chaperone [Source:ZFIN;Acc:ZDB-GENE-050913-30]
38. fbxl15 ENSDARG00000005284 213 0.819 - - - - - - 0.819 - - F-box and leucine-rich repeat protein 15 [Source:ZFIN;Acc:ZDB-GENE-040426-2440]
39. lrrc32 ENSDARG00000040621 348 0.817 - - - - 0.817 - - - - leucine rich repeat containing 32 [Source:ZFIN;Acc:ZDB-GENE-090630-1]
40. rnmtl1b 116 0.817 - 0.817 - - - - - - - RNA methyltransferase like 1b
41. haus1 ENSDARG00000058968 1336 0.816 - 0.816 - - - - - - - HAUS augmin-like complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-091204-387]
42. mitfa ENSDARG00000003732 1288 0.815 0.815 - - - - - - - - microphthalmia-associated transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990910-11]
43. eml3 ENSDARG00000058038 449 0.815 - - - - - - 0.815 - - echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
44. si:dkey-285e18.8 si:dkey-285e18.8 170 0.814 - 0.814 - - - - - - -
45. PEG3_38 PEG3_38 521 0.813 - - - - - - 0.813 - -
46. nfe2 ENSDARG00000020606 224 0.812 - 0.812 - - - - - - - nuclear factor, erythroid 2 [Source:ZFIN;Acc:ZDB-GENE-030124-1]
47. zgc:65997 ENSDARG00000043562, ENSDARG00000114791, ENSDARG00000115351 606 0.811 - 0.811 - - - - - - - zgc:65997 [Source:ZFIN;Acc:ZDB-GENE-040426-1502]
48. CUTA CUTA 1149 0.811 - - - - 0.811 - - - -
49. impdh1b ENSDARG00000029524 7472 0.811 0.811 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
50. cx39.9 ENSDARG00000004082 148 0.81 - 0.810 - - - - - - - connexin 39.9 [Source:ZFIN;Acc:ZDB-GENE-040406-2]
51. zic3 ENSDARG00000071497 1448 0.808 0.808 - - - - - - - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
52. srpk3 ENSDARG00000005916 1546 0.808 - 0.808 - - - - - - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
53. foxj1b ENSDARG00000088290 343 0.808 - - - - - 0.808 - - - forkhead box J1b [Source:ZFIN;Acc:ZDB-GENE-041212-76]
54. RBPMS ENSDARG00000099396 61 0.807 - - - - 0.807 - - - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
55. slx4ip ENSDARG00000039069 260 0.807 - - - - - - 0.807 - - SLX4 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1365]
56. atp11b atp11b 1375 0.806 0.806 - - - - - - - -
57. stox1 ENSDARG00000062593, ENSDARG00000116897 1174 0.806 0.806 - - - - - - - - storkhead box 1 [Source:ZFIN;Acc:ZDB-GENE-030925-2]
58. si:ch211-71m22.1 ENSDARG00000058638 169 0.805 - - - - - - 0.805 - - si:ch211-71m22.1 [Source:ZFIN;Acc:ZDB-GENE-070705-193]
59. clip2 ENSDARG00000059596 529 0.805 - - - - 0.805 - - - - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
60. rhoq ENSDARG00000025953 674 0.804 - 0.804 - - - - - - - ras homolog family member Q [Source:ZFIN;Acc:ZDB-GENE-030131-5721]
61. SHISA9 SHISA9 154 0.804 - - - - - - 0.804 - -
62. lgals2a ENSDARG00000054942 888 0.802 - 0.802 - - - - - - - lectin, galactoside-binding, soluble, 2a [Source:ZFIN;Acc:ZDB-GENE-050318-2]
63. klhl41a ENSDARG00000068888 1034 0.802 - 0.802 - - - - - - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
64. pld1a ENSDARG00000056228 765 0.801 - 0.801 - - - - - - - phospholipase D1a [Source:ZFIN;Acc:ZDB-GENE-031002-2]
65. mmp24 ENSDARG00000018896 178 0.801 0.801 - - - - - - - - matrix metallopeptidase 24 [Source:ZFIN;Acc:ZDB-GENE-040724-262]
66. sult2st3 ENSDARG00000028367 79 0.801 - - - - - - 0.801 - - sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
67. si:ch211-114n24.7 si:ch211-114n24.7 2544 0.8 - 0.800 - - - - - - -
68. foxd1 ENSDARG00000029179 726 0.8 - - - - 0.800 - - - - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
69. PURA PURA 172 0.8 0.800 - - - - - - - -
70. SNX20 ENSDARG00000045554 77 0.799 - - - - - - 0.799 - - sorting nexin 20 [Source:ZFIN;Acc:ZDB-GENE-100806-1]
71. nsmce4a ENSDARG00000024311 125 0.799 - - - - 0.799 - - - - NSE4 homolog A, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-050522-111]
72. C25H12orf5 C25H12orf5 65 0.798 - - - - - - 0.798 - -
73. sox18 ENSDARG00000058598 678 0.798 - - - - - 0.798 - - - SRY (sex determining region Y)-box 18 [Source:ZFIN;Acc:ZDB-GENE-080725-1]
74. SATB1 SATB1 928 0.798 - 0.798 - - - - - - -
75. CMYA5 ENSDARG00000061379 65 0.797 - 0.797 - - - - - - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
76. akr1b1 ENSDARG00000006215 2511 0.797 0.797 - - - - - - - - aldo-keto reductase family 1, member B1 (aldose reductase) [Source:ZFIN;Acc:ZDB-GENE-040625-7]
77. TJP1 TJP1 153 0.797 - - - - - - 0.797 - -
78. col15a1b ENSDARG00000061848 398 0.797 - - - - 0.797 - - - - collagen, type XV, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-689]
79. rasef ENSDARG00000076250 1359 0.796 0.796 - - - - - - - - RAS and EF-hand domain containing [Source:ZFIN;Acc:ZDB-GENE-081105-157]
80. efnb2a ENSDARG00000020164 5262 0.796 0.796 - - - - - - - - ephrin-B2a [Source:ZFIN;Acc:ZDB-GENE-990415-67]
81. zbtb2b ENSDARG00000028086, ENSDARG00000110834 1609 0.795 - - - - 0.795 - - - - zinc finger and BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2753]
82. klhl40a ENSDARG00000039052 2537 0.795 - 0.795 - - - - - - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
83. sgcb ENSDARG00000052341 4168 0.794 - 0.794 - - - - - - - sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
84. pax6l pax6l 54 0.794 - - - - 0.794 - - - -
85. CR792456.1 CR792456.1 783 0.793 - 0.793 - - - - - - -
86. rmi1 ENSDARG00000041376 674 0.793 - - - - 0.793 - - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
87. MUSTN1 MUSTN1 1882 0.793 - 0.793 - - - - - - -
88. flvcr2b ENSDARG00000031506 170 0.793 - - - - - - 0.793 - - feline leukemia virus subgroup C cellular receptor family, member 2b [Source:ZFIN;Acc:ZDB-GENE-041210-312]
89. ponzr3 ENSDARG00000088589, ENSDARG00000116407 1373 0.792 - - - - 0.792 - - - - plac8 onzin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-050506-38]
90. sat2b ENSDARG00000104221 674 0.792 - 0.792 - - - - - - - spermidine/spermine N1-acetyltransferase family member 2b [Source:ZFIN;Acc:ZDB-GENE-040718-292]
91. si:ch211-51h9.7 ENSDARG00000074720 227 0.792 - - - - 0.792 - - - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
92. shdb ENSDARG00000062109, ENSDARG00000111006 323 0.792 - 0.792 - - - - - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
93. dhrs7c dhrs7c 1173 0.792 - 0.792 - - - - - - -
94. arntl1b ENSDARG00000035732, ENSDARG00000114562 349 0.791 - 0.791 - - - - - - - aryl hydrocarbon receptor nuclear translocator-like 1b [Source:ZFIN;Acc:ZDB-GENE-030408-1]
95. zcrb1 ENSDARG00000045691 1741 0.791 - - - - 0.791 - - - - zinc finger CCHC-type and RNA binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-041210-114]
96. nlgn3b ENSDARG00000062376 171 0.791 - - - - 0.791 - - - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
97. si:ch1073-228j22.1 ENSDARG00000095799 98 0.79 - - - - - - 0.790 - - si:ch1073-228j22.1 [Source:ZFIN;Acc:ZDB-GENE-110411-219]
98. rlbp1a ENSDARG00000012504 111 0.79 - - - - 0.790 - - - - retinaldehyde binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1662]
99. cc2d2a ENSDARG00000090971 363 0.788 - 0.788 - - - - - - - coiled-coil and C2 domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2291]
100. si:ch211-181d7.1 ENSDARG00000088274, ENSDARG00000091847 18 0.788 - - - - - - 0.788 - - si:ch211-181d7.1 [Source:ZFIN;Acc:ZDB-GENE-121214-14]

There are 577 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA