Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TTC39A

Gene Name Gene ID Reads Annotation
TTC39A ENSGALG00000010540 1025 tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]











Genes with expression patterns similar to TTC39A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TTC39A ENSGALG00000010540 1025 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]
2. WDR47 ENSGALG00000002129 2624 1.779 - - 0.781 - - - - 0.998 - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
3. SYNE2 ENSGALG00000011811 5542 1.762 - - 0.769 - - - - 0.993 - - spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]
4. NDUFAF2 ENSGALG00000027564 7302 1.733 - - 0.740 - - - - 0.993 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
5. ST5 6869 1.695 - - 0.712 - - - - 0.983 - - suppression of tumorigenicity 5, transcript variant X1
6. POLL ENSGALG00000007753 2032 1.592 - - 0.869 - - - 0.723 - - - DNA polymerase lambda [Source:HGNC Symbol;Acc:HGNC:9184]
7. MAB21L1 ENSGALG00000045052 1677 1.465 - - - 0.704 - 0.761 - - - - mab-21 like 1 [Source:NCBI gene;Acc:395208]
8. NUDCD1 ENSGALG00000040879 2965 0.999 - - - - - - - 0.999 - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
9. ACL ACL 1813 0.999 - - - - - - - 0.999 - -
10. RRAGD ENSGALG00000026971 2429 0.998 - - - - - - - 0.998 - - Ras related GTP binding D [Source:HGNC Symbol;Acc:HGNC:19903]
11. CDC123 ENSGALG00000014038 1418 0.998 - - - - - - - 0.998 - - cell division cycle 123 [Source:HGNC Symbol;Acc:HGNC:16827]
12. DACH1 ENSGALG00000037015 5648 0.998 - - - - - - - 0.998 - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
13. TMEFF1 ENSGALG00000013212 4222 0.998 - - - - - - - 0.998 - - transmembrane protein with EGF-like and two follistatin-like domains 1
14. TOLLIP ENSGALG00000006697 917 0.998 - - - - - - - 0.998 - - toll interacting protein [Source:NCBI gene;Acc:423099]
15. ACTR10 ENSGALG00000012041 2752 0.998 - - - - - - - 0.998 - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
16. FAM114A1 ENSGALG00000013583 736 0.998 - - - - - - - 0.998 - - family with sequence similarity 114 member A1 [Source:NCBI gene;Acc:426196]
17. DERL3 ENSGALG00000005994 1499 0.998 - - - - - - - 0.998 - - derlin 3 [Source:NCBI gene;Acc:416934]
18. OLFM1 ENSGALG00000002515 1841 0.998 - - - - - - - 0.998 - - olfactomedin 1 [Source:NCBI gene;Acc:395535]
19. ENSGALG00000004643 ENSGALG00000004643 2297 0.998 - - - - - - - 0.998 - -
20. C10orf76 C10orf76 2424 0.998 - - - - - - - 0.998 - -
21. USP3 ENSGALG00000003427 1236 0.998 - - - - - - - 0.998 - - ubiquitin specific peptidase 3 [Source:HGNC Symbol;Acc:HGNC:12626]
22. SLC43A3 ENSGALG00000020479 1332 0.998 - - - - - - - 0.998 - - solute carrier family 43 member 3 [Source:HGNC Symbol;Acc:HGNC:17466]
23. CUTC ENSGALG00000037283 2530 0.997 - - - - - - - 0.997 - - cutC copper transporter [Source:NCBI gene;Acc:423829]
24. RGMA ENSGALG00000039173 12874 0.997 - - - - - - - 0.997 - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
25. C3H6ORF120 C3H6ORF120 2712 0.997 - - - - - - - 0.997 - -
26. LYPLA2 ENSGALG00000004002 3939 0.997 - - - - - - - 0.997 - - lysophospholipase II [Source:NCBI gene;Acc:419685]
27. PHF12 ENSGALG00000031368 1960 0.997 - - - - - - - 0.997 - - PHD finger protein 12 [Source:HGNC Symbol;Acc:HGNC:20816]
28. HIC2 ENSGALG00000033416 4051 0.997 - - - - - - - 0.997 - - hypermethylated in cancer 2 [Source:NCBI gene;Acc:416768]
29. RFWD3 2315 0.997 - - - - - - - 0.997 - - ring finger and WD repeat domain 3
30. DIP2C ENSGALG00000006652 1858 0.997 - - - - - - - 0.997 - - disco interacting protein 2 homolog C [Source:HGNC Symbol;Acc:HGNC:29150]
31. DARS ENSGALG00000012355 2887 0.997 - - - - - - - 0.997 - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
32. UBQLN1 ENSGALG00000012585 5158 0.996 - - - - - - - 0.996 - - ubiquilin 1 [Source:HGNC Symbol;Acc:HGNC:12508]
33. PI4KA ENSGALG00000040756 3973 0.996 - - - - - - - 0.996 - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
34. RP2 ENSGALG00000016728 3291 0.996 - - - - - - - 0.996 - - RP2, ARL3 GTPase activating protein [Source:NCBI gene;Acc:418675]
35. SNAI1 ENSGALG00000008018 3930 0.996 - - - - - - - 0.996 - - snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
36. SOCS5 ENSGALG00000010016 1134 0.996 - - - - - - - 0.996 - - suppressor of cytokine signaling 5 [Source:NCBI gene;Acc:428570]
37. MFN1 ENSGALG00000041873 4170 0.996 - - - - - - - 0.996 - - mitofusin 1 [Source:NCBI gene;Acc:424973]
38. PYURF ENSGALG00000039869 5657 0.995 - - - - - - - 0.995 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
39. DTD2 ENSGALG00000009978 4322 0.994 - - - - - - - 0.994 - - D-tyrosyl-tRNA deacylase 2 (putative) [Source:HGNC Symbol;Acc:HGNC:20277]
40. TRNT1 ENSGALG00000017368 11932 0.994 - - - - - - - 0.994 - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
41. HCFC2 ENSGALG00000029616 4525 0.993 - - - - - - - 0.993 - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
42. SDAD1 ENSGALG00000011543 5191 0.993 - - - - - - - 0.993 - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
43. LONP1 ENSGALG00000040492 7133 0.993 - - - - - - - 0.993 - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
44. NABP1 ENSGALG00000025884 4195 0.992 - - - - - - - 0.992 - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
45. TP53INP1 ENSGALG00000041353 6890 0.99 - - - - - - - 0.990 - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
46. ZNF639 ENSGALG00000005944 6387 0.99 - - - - - - - 0.990 - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
47. PITX3 ENSGALG00000005613 1518 0.99 - - - - - - - 0.990 - - paired like homeodomain 3
48. DYRK2 ENSGALG00000009901 3141 0.989 - - - - - - - 0.989 - - dual specificity tyrosine phosphorylation regulated kinase 2 [Source:NCBI gene;Acc:427864]
49. ZC3H6 ENSGALG00000008269 10353 0.988 - - - - - - - 0.988 - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
50. PDZD11 ENSGALG00000004198 11484 0.984 - - - - - - - 0.984 - - PDZ domain containing 11 [Source:NCBI gene;Acc:422153]
51. MICU3 ENSGALG00000013661 1466 0.983 - - - - - - - 0.983 - - mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820]
52. DCAF7 ENSGALG00000000510 8681 0.983 - - - - - - - 0.983 - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
53. HAPLN1 ENSGALG00000015627 14942 0.982 - - - - - - - 0.982 - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
54. ABL ABL 9532 0.981 - - - - - - - 0.981 - -
55. USP9X ENSGALG00000016236 9419 0.98 - - - - - - - 0.980 - - ubiquitin specific peptidase 9, X-linked, transcript variant X3
56. COMMD7 ENSGALG00000006630 11491 0.979 - - - - - - - 0.979 - - COMM domain containing 7 [Source:NCBI gene;Acc:419286]
57. PPP3CB ENSGALG00000005243 8794 0.979 - - - - - - - 0.979 - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
58. GALNT1 ENSGALG00000013135 13583 0.974 - - - - - - - 0.974 - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
59. TFIP11 ENSGALG00000005623 7784 0.972 - - - - - - - 0.972 - - tuftelin interacting protein 11 [Source:NCBI gene;Acc:416909]
60. ZOV3 ZOV3 3267 0.97 - - 0.970 - - - - - - -
61. DHFR ENSGALG00000026757 18478 0.97 - - - - - - - 0.970 - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
62. SAMHD1 ENSGALG00000001231 5218 0.969 - - - - - - - 0.969 - - SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [Source:NCBI gene;Acc:419125]
63. RGL1 ENSGALG00000004728 3004 0.967 - - - - - - - 0.967 - - ral guanine nucleotide dissociation stimulator like 1 [Source:NCBI gene;Acc:424446]
64. TMEM120B ENSGALG00000004254 2819 0.964 - - - - - - - 0.964 - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
65. APAF1 ENSGALG00000011531 3102 0.959 - - - - - - - 0.959 - - apoptotic peptidase activating factor 1 [Source:HGNC Symbol;Acc:HGNC:576]
66. PPP2R5C ENSGALG00000029996 5759 0.957 - - - - - - - 0.957 - - protein phosphatase 2 regulatory subunit B'gamma [Source:NCBI gene;Acc:423460]
67. GPATCH1 ENSGALG00000004839 6455 0.954 - - - - - - - 0.954 - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
68. ZNF423 ENSGALG00000003891 103 0.952 - - 0.952 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
69. GPS1 ENSGALG00000002827 8433 0.951 - - - - - - - 0.951 - - G protein pathway suppressor 1 [Source:NCBI gene;Acc:417382]
70. COG7 ENSGALG00000006156 4072 0.945 - - - - - - - 0.945 - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
71. SYBU ENSGALG00000036527 1221 0.939 - - 0.939 - - - - - - - syntabulin [Source:HGNC Symbol;Acc:HGNC:26011]
72. LYPD6B ENSGALG00000028759 831 0.939 - - 0.939 - - - - - - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
73. PKP2 ENSGALG00000012913 2547 0.933 - - - - - - - 0.933 - - plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
74. CIAPIN1 ENSGALG00000029268 23036 0.932 - - - - - - - 0.932 - - cytokine induced apoptosis inhibitor 1 [Source:NCBI gene;Acc:415637]
75. SLC4A4 ENSGALG00000031105 534 0.932 - - 0.932 - - - - - - - solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
76. INTS9 ENSGALG00000016631 742 0.925 - - 0.925 - - - - - - - integrator complex subunit 9 [Source:NCBI gene;Acc:422023]
77. RPF1 ENSGALG00000008796 9809 0.923 - - - - - - - 0.923 - - ribosome production factor 1 homolog
78. LRR1 ENSGALG00000012230 1062 0.923 - - 0.923 - - - - - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
79. RAB3B ENSGALG00000010567 894 0.919 - - 0.919 - - - - - - - RAB3B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9778]
80. CDV3 ENSGALG00000032316 693 0.917 - - 0.917 - - - - - - - CDV3 homolog [Source:NCBI gene;Acc:420693]
81. MGMT ENSGALG00000042949 53 0.915 - - 0.915 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
82. KIAA0195 KIAA0195 48 0.915 - - 0.915 - - - - - - -
83. ADAMTS2 ENSGALG00000032974 141 0.915 - - 0.915 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
84. KLHL15 ENSGALG00000016345 1638 0.915 - - 0.915 - - - - - - - kelch like family member 15 [Source:NCBI gene;Acc:418598]
85. WDR89 ENSGALG00000011827 1481 0.914 - - 0.914 - - - - - - - WD repeat domain 89 [Source:NCBI gene;Acc:423510]
86. POMC ENSGALG00000016600 99 0.914 - - 0.914 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
87. RHOC ENSGALG00000001569 53 0.914 - - 0.914 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
88. ENSGALG00000023180 ENSGALG00000023180 83 0.914 - - 0.914 - - - - - - -
89. EXTL2 ENSGALG00000027984 808 0.914 - - 0.914 - - - - - - - exostosin like glycosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:3516]
90. PLEKHG5 ENSGALG00000027476 42 0.913 - - 0.913 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
91. GRIK3 ENSGALG00000002098 111 0.913 - - 0.913 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
92. MT-ND4L MT-ND4L 12537 0.912 - - - - - - - 0.912 - -
93. CIDEC ENSGALG00000026945 718 0.911 - - 0.911 - - - - - - - cell death inducing DFFA like effector c [Source:NCBI gene;Acc:100859733]
94. DLG3 ENSGALG00000041900 3016 0.911 - - 0.911 - - - - - - - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
95. MT1 MT1 218 0.91 - - 0.910 - - - - - - -
96. YLPM1 671 0.91 - - 0.910 - - - - - - - YLP motif containing 1
97. TMEM104 ENSGALG00000007747 2390 0.908 - - 0.908 - - - - - - - transmembrane protein 104 [Source:NCBI gene;Acc:422110]
98. FBXO34 ENSGALG00000032563 656 0.907 - - 0.907 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
99. FBF1 ENSGALG00000002179 1738 0.907 - - 0.907 - - - - - - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
100. MRPS27 ENSGALG00000015002 6541 0.906 - - 0.906 - - - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]

There are 399 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA