Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TTC3

Gene Name Gene ID Reads Annotation
TTC3 ENSGALG00000016050 4115 tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]











Genes with expression patterns similar to TTC3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TTC3 ENSGALG00000016050 4115 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
2. CTCF 10811 1.748 - - - - - - 0.852 - - 0.896 CCCTC-binding factor, transcript variant X2
3. SPEN ENSGALG00000036932 9688 1.731 - - - - - - 0.834 0.897 - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
4. VPRBP VPRBP 4037 1.654 - - - - - 0.779 - - - 0.875
5. SUPV3L1 ENSGALG00000004197 4141 1.645 - - - - - - 0.708 - - 0.937 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
6. MRPL15 ENSGALG00000041086 16820 1.635 - - - - - - 0.797 - - 0.838 mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
7. SBNO1 ENSGALG00000003392 6731 1.63 - - - - - - 0.727 - - 0.903 strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
8. DLX5 ENSGALG00000009129 1395 1.628 - - - - - - 0.711 - - 0.917 distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
9. SLC15A4 ENSGALG00000002695 2729 1.627 - - - - - - 0.754 - - 0.873 solute carrier family 15 member 4 [Source:HGNC Symbol;Acc:HGNC:23090]
10. TRIM24 ENSGALG00000012823 2725 1.624 - - - - - - 0.733 - - 0.891 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
11. TOR1AIP1 ENSGALG00000029238 5843 1.61 - - - - - - 0.781 - - 0.829 torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
12. HEATR5A 1233 1.601 - - - - - - 0.700 - - 0.901 HEAT repeat containing 5A, transcript variant X7
13. MED17 ENSGALG00000017218 5821 1.591 - - - - - - 0.763 - - 0.828 mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
14. IMPA2 ENSGALG00000013814 4202 1.58 - - - - - - 0.717 - - 0.863 inositol monophosphatase 2 [Source:HGNC Symbol;Acc:HGNC:6051]
15. PON2 ENSGALG00000009689 1416 1.575 - - - - - 0.796 - - - 0.779 paraoxonase 2 [Source:NCBI gene;Acc:395830]
16. U2SURP ENSGALG00000002612 4255 1.568 - - - - - 0.701 - - - 0.867 U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855]
17. METTL6 ENSGALG00000040665 4467 1.566 - - - - - - 0.815 - - 0.751 methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
18. TET1 ENSGALG00000031604 13002 1.564 - - - - - - 0.763 - - 0.801 tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
19. MLST8 ENSGALG00000005878 8116 1.564 - - - - - - 0.715 - - 0.849 MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
20. PHF2 ENSGALG00000039208 2003 1.56 - - - - - - 0.746 - - 0.814 PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
21. USE1 ENSGALG00000003703 4680 1.559 - - - - - - 0.704 - - 0.855 unconventional SNARE in the ER 1 [Source:NCBI gene;Acc:420134]
22. C2CD5 ENSGALG00000013210 3060 1.559 - - - - - - 0.741 - - 0.818 C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
23. INTS12 ENSGALG00000010575 2976 1.548 - - - - - - 0.706 - - 0.842 integrator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:25067]
24. FBXL17 ENSGALG00000000276 2443 1.546 - - - - - - 0.717 - - 0.829 F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
25. ARHGAP11A ENSGALG00000009731 6817 1.542 - - - - - - 0.719 - - 0.823 Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
26. FAM177A1 ENSGALG00000010046 4318 1.54 - - - - - 0.766 0.774 - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
27. KIAA1671 ENSGALG00000005512 2540 1.538 - - - - - - 0.756 - - 0.782 KIAA1671 [Source:NCBI gene;Acc:768701]
28. EHD3 ENSGALG00000009086 14407 1.53 - - - - - - 0.816 - - 0.714 EH domain containing 3 [Source:NCBI gene;Acc:421306]
29. XPC ENSGALG00000006357 2484 1.527 - - - - - 0.754 - - - 0.773 XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
30. NASP ENSGALG00000010255 28423 1.526 - - - - - - 0.801 - - 0.725 nuclear autoantigenic sperm protein, transcript variant X3
31. COMMD4 ENSGALG00000001572 31664 1.525 - - - - - - 0.797 - - 0.728 COMM domain containing 4 [Source:NCBI gene;Acc:770048]
32. GLRX3 ENSGALG00000010464 22578 1.524 - - - - - - 0.807 - - 0.717 glutaredoxin 3 [Source:NCBI gene;Acc:423968]
33. DBT ENSGALG00000005280 2893 1.521 - - - - - 0.812 0.709 - - - dihydrolipoamide branched chain transacylase E2 [Source:NCBI gene;Acc:395374]
34. GTF2H2 ENSGALG00000002399 2361 1.52 - - - - - - 0.788 - - 0.732 general transcription factor IIH subunit 2, transcript variant X2
35. EMG1 ENSGALG00000014568 8102 1.512 - - - - - - 0.798 - - 0.714 EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
36. PSMC3IP ENSGALG00000019741 5428 1.509 - - - - - - 0.744 - - 0.765 PSMC3 interacting protein [Source:HGNC Symbol;Acc:HGNC:17928]
37. ANKRD50 ENSGALG00000011831 2870 1.499 - - - - - - 0.732 - - 0.767 ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
38. DLD ENSGALG00000007931 11011 1.497 - - - - - - 0.775 - - 0.722 dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
39. TEAD4 ENSGALG00000014342 6123 1.492 - - - - - 0.778 - - - 0.714 Gallus gallus TEA domain transcription factor 4 (TEAD4), transcript variant 7, mRNA. [Source:RefSeq mRNA;Acc:NM_001359859]
40. COX7C ENSGALG00000027963 84312 1.489 - - - - - 0.770 0.719 - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
41. SDR16C5 ENSGALG00000015416, ENSGALG00000022827 1038 1.483 - - - - - 0.759 0.724 - - - short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
42. SRBD1 ENSGALG00000009990 4568 1.478 - - - - - 0.735 0.743 - - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
43. HIBADH ENSGALG00000033207 3540 1.446 - - - - - 0.713 - - - 0.733 3-hydroxyisobutyrate dehydrogenase [Source:NCBI gene;Acc:420632]
44. PPIH ENSGALG00000004874 25558 1.425 - - - - - - 0.707 - - 0.718 peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
45. CEP85L ENSGALG00000014892 8718 0.995 - - - - - - - 0.995 - - centrosomal protein 85 like [Source:HGNC Symbol;Acc:HGNC:21638]
46. GGT1 ENSGALG00000006565 690 0.94 - - - - - - - 0.940 - - gamma-glutamyltransferase 1, transcript variant X11
47. FAM96B 14435 0.934 - - - - - - - - - 0.934 family with sequence similarity 96 member B
48. COL12A1 ENSGALG00000015908 1300 0.93 - - - - - - - - - 0.930 collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
49. CEP57 ENSGALG00000017201 524 0.929 - - - - - - - - - 0.929 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
50. ATP2B2 ENSGALG00000030908 584 0.929 - - - - - - - - - 0.929 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
51. ENSGALG00000027621 ENSGALG00000027621 863 0.928 - - - - - - - - - 0.928
52. ENSGALG00000004772 ENSGALG00000004772 173 0.928 - - - - - - - - - 0.928
53. CCBL2 CCBL2 184 0.926 - - - - - - - - - 0.926
54. TM6SF2 ENSGALG00000029015 109 0.925 - - - - - - - - - 0.925 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
55. PCMTD2 ENSGALG00000005901 1833 0.925 - - - - - - - - - 0.925 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
56. AGMO ENSGALG00000010792 76 0.925 - - - - - - - - - 0.925 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
57. UBE3C ENSGALG00000006461 57 0.925 - - - - - - - - - 0.925 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
58. ENSGALG00000018358 ENSGALG00000018358 101 0.924 - - - - - - - - - 0.924
59. STX6 3297 0.924 - - - - - - - - - 0.924 syntaxin 6
60. RBM15B 5416 0.924 - - - - - - - 0.924 - - RNA binding motif protein 15B
61. SHPK ENSGALG00000004637 2386 0.924 - - - - - - - - - 0.924 sedoheptulokinase, transcript variant X1
62. MAP3K8 ENSGALG00000007356 188 0.923 - - - - - - - - - 0.923 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
63. ENSGALG00000008594 ENSGALG00000008594 54 0.923 - - - - - - - - - 0.923
64. SOS2 ENSGALG00000012273 41 0.923 - - - - - - - - - 0.923 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
65. DTX2 ENSGALG00000001905 1475 0.923 - - - - - - - - - 0.923 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
66. CENPJ ENSGALG00000017148 1415 0.923 - - - - - - - - - 0.923 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
67. INTS8 ENSGALG00000037955 3349 0.922 - - - - - - - - - 0.922 integrator complex subunit 8 [Source:NCBI gene;Acc:420230]
68. CNKSR3 ENSGALG00000027159 41 0.922 - - - - - - - - - 0.922 CNKSR family member 3, transcript variant X2
69. ENSGALG00000004643 ENSGALG00000004643 2297 0.921 - - - - - - - - - 0.921
70. SLC38A1 ENSGALG00000009698 566 0.921 - - - - - - - - - 0.921 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
71. GPR114 GPR114 46 0.921 - - - - - - - - - 0.921
72. EEA1 ENSGALG00000011280 923 0.921 - - - - - - - - - 0.921 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
73. IFNAR2 ENSGALG00000041867 1596 0.92 - - - - - - - - - 0.920 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
74. BCOR ENSGALG00000016245 85 0.92 - - - - - - - - - 0.920 BCL6 corepressor, transcript variant X8
75. NFKBIE ENSGALG00000044525 633 0.92 - - - - - - - - - 0.920 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
76. ZNF142 ENSGALG00000011393 2078 0.919 - - - - - - - - - 0.919 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
77. RP9 ENSGALG00000035453 1186 0.919 - - - - - - - - - 0.919 retinitis pigmentosa 9 (autosomal dominant)
78. PRKAB2 ENSGALG00000001678 1999 0.919 - - - - - - - - - 0.919 protein kinase AMP-activated non-catalytic subunit beta 2 [Source:NCBI gene;Acc:427017]
79. ADAMTS12 55 0.919 - - - - - - - - - 0.919 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
80. TTI1 ENSGALG00000006791 1218 0.918 - - - - - - - - - 0.918 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
81. TFG ENSGALG00000015299 849 0.918 - - - - - - - - - 0.918 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
82. PRICKLE1 ENSGALG00000009556 60 0.918 - - - - - - - - - 0.918 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
83. RGP1 ENSGALG00000002394 5937 0.918 - - - - - - - - - 0.918 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
84. TRMT44 ENSGALG00000015594 1490 0.917 - - - - - - - - - 0.917 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
85. RASSF8 ENSGALG00000014041 850 0.916 - - - - - - - - - 0.916 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
86. ELL2 ENSGALG00000014678 1111 0.916 - - - - - - - - - 0.916 elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
87. CTK-1 CTK-1 1618 0.916 - - - - - - - - - 0.916
88. PDCD7 ENSGALG00000021027 3807 0.915 - - - - - - - - - 0.915 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
89. MAP3K3 ENSGALG00000000525 115 0.914 - - - - - - - - - 0.914 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
90. ZNHIT3 ENSGALG00000026031 8652 0.914 - - - - - - - 0.914 - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
91. SERPINB6 ENSGALG00000012866 1582 0.914 - - - - - - - - - 0.914 serpin family B member 6 [Source:NCBI gene;Acc:420895]
92. PROCR ENSGALG00000006547 645 0.913 - - - - - - - - - 0.913 protein C receptor [Source:NCBI gene;Acc:424867]
93. PTPRE ENSGALG00000009823 250 0.913 - - - - - - - - - 0.913 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
94. TRIM3 ENSGALG00000034004 110 0.913 - - - - - - - - - 0.913 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
95. OBFC1 OBFC1 1071 0.913 - - - - - - - - - 0.913
96. FOXP1 127 0.912 - - - - - - - - - 0.912 forkhead box P1, transcript variant X14
97. ENSGALG00000001919 ENSGALG00000001919 531 0.912 - - - - - - - - - 0.912
98. CEP55 ENSGALG00000006639 258 0.912 - - - - - - - - - 0.912 centrosomal protein 55 [Source:HGNC Symbol;Acc:HGNC:1161]
99. RPGR ENSGALG00000036284 186 0.912 - - - - - - - - - 0.912 retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]
100. KIF3A ENSGALG00000006860 6209 0.91 - - - - - - - 0.910 - - kinesin family member 3A [Source:NCBI gene;Acc:416332]

There are 919 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA