Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TTC28

Gene Name Gene ID Reads Annotation
TTC28 ENSGALG00000005676 36 tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]











Genes with expression patterns similar to TTC28

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TTC28 ENSGALG00000005676 36 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
2. SGK2 ENSGALG00000003537 26 1.845 - - - - 0.934 - - 0.911 - - SGK2, serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:13900]
3. FZD1 ENSGALG00000009064 76 1.798 - - - - - 0.974 - 0.824 - - frizzled class receptor 1 [Source:NCBI gene;Acc:374062]
4. SYNC ENSGALG00000003529 389 1.685 - - - - - 0.780 - - - 0.905 syncoilin, intermediate filament protein [Source:HGNC Symbol;Acc:HGNC:28897]
5. SPERT ENSGALG00000016981 145 1.661 - - - - - 0.889 0.772 - - - spermatid associated [Source:NCBI gene;Acc:418848]
6. ARMC4 ENSGALG00000007417 71 1.647 - - - - - 0.803 - - - 0.844 armadillo repeat containing 4 [Source:HGNC Symbol;Acc:HGNC:25583]
7. CABP2 ENSGALG00000037497 329 1.624 - - - - - 0.708 - - - 0.916 calcium binding protein 2 [Source:NCBI gene;Acc:429967]
8. KCNV1 ENSGALG00000031449 64 1.553 - - - - - - 0.772 0.781 - - potassium voltage-gated channel modifier subfamily V member 1
9. PLXNC1 ENSGALG00000011309 69 1.464 - - - - - - 0.711 - - 0.753 plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
10. ENSGALG00000023027 ENSGALG00000023027 5 1 - - - - - 1.000 - - - -
11. Six3os1 Six3os1 1 1 - - - - - 1.000 - - - -
12. FIP1L1 ENSGALG00000013943 15 1 - - - - - 1.000 - - - - factor interacting with PAPOLA and CPSF1, transcript variant X5
13. ENSGALG00000021375 ENSGALG00000021375 1 1 - - - - - 1.000 - - - -
14. SLC30A1 ENSGALG00000009858 5 1 - - - - - 1.000 - - - - solute carrier family 30 member 1 [Source:HGNC Symbol;Acc:HGNC:11012]
15. HAPLN4 ENSGALG00000026563 9 1 - - - - - 1.000 - - - - hyaluronan and proteoglycan link protein 4 [Source:HGNC Symbol;Acc:HGNC:31357]
16. EDNRB2 ENSGALG00000007466 1 1 - - - - - 1.000 - - - - endothelin receptor B subtype 2 [Source:NCBI gene;Acc:373909]
17. SYT15 ENSGALG00000002046 3 1 - - - - - 1.000 - - - - synaptotagmin 15, transcript variant X1
18. ENSGALG00000020819 ENSGALG00000020819 2 1 - - - - - 1.000 - - - -
19. RASSF6 ENSGALG00000011664 7 1 - - - - - 1.000 - - - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
20. ENSGALG00000018528 ENSGALG00000018528 1 1 - - - - - 1.000 - - - -
21. KLHL1 ENSGALG00000016907 21 1 - - - - - 1.000 - - - - kelch like family member 1 [Source:HGNC Symbol;Acc:HGNC:6352]
22. LFABP LFABP 5 1 - - - - - 1.000 - - - -
23. ESAM ENSGALG00000032943 1 1 - - - - - 1.000 - - - - endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:17474]
24. ENSGALG00000026341 ENSGALG00000026341 1 1 - - - - - 1.000 - - - -
25. CNGA3 ENSGALG00000039826 3 1 - - - - - 1.000 - - - - cyclic nucleotide gated channel alpha 3 [Source:NCBI gene;Acc:396144]
26. LDLRAD3 ENSGALG00000038913 4 1 - - - - - 1.000 - - - - low density lipoprotein receptor class A domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27046]
27. PTPN23 ENSGALG00000038522 93 1 - - - - - 1.000 - - - - protein tyrosine phosphatase, non-receptor type 23 [Source:HGNC Symbol;Acc:HGNC:14406]
28. TRAIL-LIKE ENSGALG00000007240 8 1 - - - - - 1.000 - - - - TNF-related apoptosis inducing ligand-like [Source:NCBI gene;Acc:395283]
29. NKX2-5 ENSGALG00000002886 81 1 - - - - - 1.000 - - - - NK2 homeobox 5 [Source:NCBI gene;Acc:396073]
30. FXYD2 ENSGALG00000007320 168 1 - - - - - 1.000 - - - - FXYD domain containing ion transport regulator 2 [Source:NCBI gene;Acc:419770]
31. RBM47 ENSGALG00000014267 6 1 - - - - - 1.000 - - - - RNA binding motif protein 47 [Source:HGNC Symbol;Acc:HGNC:30358]
32. GGT5 ENSGALG00000040504 24 1 - - - - - 1.000 - - - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
33. gga-mir-6579-2 ENSGALG00000035346 7 1 - - - - - 1.000 - - - - gga-mir-6579-2 [Source:miRBase;Acc:MI0022398]
34. GPR114 GPR114 46 1 - - - - - 1.000 - - - -
35. SPTBN5 395 1 - - - - - 1.000 - - - - spectrin beta, non-erythrocytic 5
36. RAP2C ENSGALG00000006061 11 0.991 - - - - - - - - - 0.991 RAP2C, member of RAS oncogene family [Source:NCBI gene;Acc:422232]
37. PITPNM2 ENSGALG00000003645 17 0.991 - - - - - - - - - 0.991 phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
38. ENSGALG00000000188 ENSGALG00000000188 11 0.991 - - - - - - - - - 0.991
39. SLC39A8 ENSGALG00000012298 9 0.991 - - - - - - - - - 0.991 solute carrier family 39 member 8 [Source:HGNC Symbol;Acc:HGNC:20862]
40. C16orf62 C16orf62 316 0.989 - - - - - - - 0.989 - -
41. RANBP3L 19 0.988 - - - - - - - - - 0.988 RAN binding protein 3 like, transcript variant X2
42. CPN2 ENSGALG00000045776 18 0.984 - - - - - - - - - 0.984 carboxypeptidase N subunit 2
43. EFCAB12 EFCAB12 15 0.983 - - - - - 0.983 - - - -
44. KIAA1045 KIAA1045 23 0.983 - - - - - - - - - 0.983
45. FAM105A ENSGALG00000012965 6 0.98 - - - - - - - - - 0.980 family with sequence similarity 105 member A [Source:NCBI gene;Acc:769855]
46. RECQL5 ENSGALG00000002424 16 0.979 - - - - - 0.979 - - - - RecQ like helicase 5 [Source:NCBI gene;Acc:373891]
47. CMTR2 ENSGALG00000002356 3 0.979 - - - - - 0.979 - - - - cap methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:25635]
48. LOC421584 ENSGALG00000011579 8 0.979 - - - - - - - - - 0.979 solute carrier family 22 member 2-like
49. BAP1 ENSGALG00000004366 12 0.975 - - - - - - - 0.975 - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
50. NDST3 22 0.975 - - - - - - - 0.975 - - N-deacetylase and N-sulfotransferase 3, transcript variant X11
51. PLCXD1 ENSGALG00000016721 289 0.974 - - - - - - - - - 0.974 phosphatidylinositol specific phospholipase C X domain containing 1 [Source:NCBI gene;Acc:418673]
52. ENSGALG00000021884 ENSGALG00000021884 29 0.973 - - - - - - - 0.973 - -
53. UROC1 ENSGALG00000006306 75 0.973 - - - - - 0.973 - - - - urocanate hydratase 1 [Source:HGNC Symbol;Acc:HGNC:26444]
54. LRRC2 ENSGALG00000013634 69 0.971 - - - - - - - - - 0.971 leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:14676]
55. RXFP1 ENSGALG00000009429 10 0.969 - - - - - - - - - 0.969 relaxin family peptide receptor 1 [Source:HGNC Symbol;Acc:HGNC:19718]
56. NUDT15 ENSGALG00000016994 210 0.965 - - - - - - - - - 0.965 nudix hydrolase 15 [Source:HGNC Symbol;Acc:HGNC:23063]
57. YTHDF1 ENSGALG00000005745 135 0.963 - - - - - - - - - 0.963 YTH N6-methyladenosine RNA binding protein 1 [Source:NCBI gene;Acc:419238]
58. AMPD1 ENSGALG00000002082 228 0.962 - - - - - 0.962 - - - - adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:HGNC:468]
59. PPP1R15B ENSGALG00000000611 412 0.959 - - - - - - - - - 0.959 protein phosphatase 1 regulatory subunit 15B [Source:HGNC Symbol;Acc:HGNC:14951]
60. OIT3 ENSGALG00000004345 4886 0.958 - - - - - - - - - 0.958 oncoprotein induced transcript 3 [Source:HGNC Symbol;Acc:HGNC:29953]
61. CHST3 ENSGALG00000024056 308 0.955 - - - - - - 0.955 - - - carbohydrate sulfotransferase 3 [Source:NCBI gene;Acc:396018]
62. ENSGALG00000027170 ENSGALG00000027170 6 0.954 - - - - - 0.954 - - - -
63. SHCBP1 ENSGALG00000004444 59 0.953 - - - - - - - - - 0.953 SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]
64. SLC6A13 ENSGALG00000012985 194 0.952 - - - - - - - - - 0.952 solute carrier family 6 member 13 [Source:HGNC Symbol;Acc:HGNC:11046]
65. ZNF814 ZNF814 13 0.952 - - - - - - - - - 0.952
66. JMJD4 ENSGALG00000005417 10 0.947 - - - - - - - 0.947 - - jumonji domain containing 4 [Source:NCBI gene;Acc:420400]
67. GPRIN2 ENSGALG00000002048 17 0.947 - - - - - - - 0.947 - - G protein regulated inducer of neurite outgrowth 2 [Source:NCBI gene;Acc:395648]
68. MYO1D ENSGALG00000000674 14 0.947 - - - - - 0.947 - - - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
69. RIBC2 ENSGALG00000014232 13 0.947 - - - - - 0.947 - - - - RIB43A domain with coiled-coils 2 [Source:HGNC Symbol;Acc:HGNC:13241]
70. PCNXL4 PCNXL4 58 0.946 - - - - - - - - - 0.946
71. SLC37A2 ENSGALG00000035842 1183 0.944 - - - - - - - - - 0.944 solute carrier family 37 member 2 [Source:HGNC Symbol;Acc:HGNC:20644]
72. MBTPS2 ENSGALG00000016382 259 0.944 - - - - - 0.944 - - - - membrane bound transcription factor peptidase, site 2 [Source:HGNC Symbol;Acc:HGNC:15455]
73. ANKRD28 ENSGALG00000011226 160 0.943 - - - - - - - - - 0.943 ankyrin repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29024]
74. TNIP2 ENSGALG00000015666 28 0.941 - - - - - 0.941 - - - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
75. CYP3A4 ENSGALG00000004436 75 0.941 - - - - - - - - - 0.941 Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
76. PHF10 ENSGALG00000011192 361 0.94 - - - - - - - - - 0.940 PHD finger protein 10 [Source:HGNC Symbol;Acc:HGNC:18250]
77. URAH ENSGALG00000000549 484 0.94 - - - - - - - - - 0.940 5-hydroxyisourate hydrolase [Source:NCBI gene;Acc:415859]
78. CENPA ENSGALG00000037735 171 0.936 - - - - - - - - - 0.936 centromere protein A [Source:NCBI gene;Acc:100113359]
79. GSS ENSGALG00000003281 57 0.934 - - - - - - - 0.934 - - glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
80. ZBTB6 ENSGALG00000021570 15 0.934 - - - - - - - 0.934 - - zinc finger and BTB domain containing 6 [Source:NCBI gene;Acc:417108]
81. TBC1D20 ENSGALG00000006201 6 0.934 - - - - - - - 0.934 - - TBC1 domain family member 20 [Source:HGNC Symbol;Acc:HGNC:16133]
82. ENSGALG00000008309 ENSGALG00000008309 7 0.934 - - - - - - - 0.934 - -
83. NEK9 ENSGALG00000010314 6 0.934 - - - - - - - 0.934 - - NIMA related kinase 9 [Source:HGNC Symbol;Acc:HGNC:18591]
84. ISLR ENSGALG00000021525 142 0.934 - - - - - - - 0.934 - - immunoglobulin superfamily containing leucine rich repeat [Source:HGNC Symbol;Acc:HGNC:6133]
85. TMEM67 ENSGALG00000029287 2 0.934 - - - - - - - 0.934 - - transmembrane protein 67, transcript variant X2
86. KMO ENSGALG00000007503 7 0.934 - - - - - - - 0.934 - - kynurenine 3-monooxygenase [Source:HGNC Symbol;Acc:HGNC:6381]
87. NEUROD6 1 0.934 - - - - - - - 0.934 - - neuronal differentiation 6, transcript variant X1
88. ANGPTL5 ENSGALG00000017191 2 0.934 - - - - - - - 0.934 - - angiopoietin like 5 [Source:NCBI gene;Acc:772036]
89. LYG2 ENSGALG00000016761 7 0.934 - - - - - - - 0.934 - - lysozyme g2 [Source:NCBI gene;Acc:395708]
90. AANAT ENSGALG00000001955 23 0.934 - - - - - - - 0.934 - - aralkylamine N-acetyltransferase [Source:NCBI gene;Acc:396066]
91. ENSGALG00000026863 ENSGALG00000026863 1 0.934 - - - - - - - 0.934 - -
92. USP13 ENSGALG00000008909 8 0.934 - - - - - - - 0.934 - - ubiquitin specific peptidase 13 (isopeptidase T-3) [Source:NCBI gene;Acc:429286]
93. SRGAP2 ENSGALG00000000816 97 0.928 - - - - - - - - - 0.928 SLIT-ROBO Rho GTPase activating protein 2, transcript variant X11
94. ENSGALG00000000789 ENSGALG00000000789 24 0.926 - - - - - - - - - 0.926
95. CARD8 ENSGALG00000007698 45 0.923 - - - - - - - - - 0.923 caspase recruitment domain family, member 8
96. GAL7 GAL7 92 0.921 - - - - - - - 0.921 - -
97. CEP170B ENSGALG00000011639 71 0.921 - - - - - 0.921 - - - - centrosomal protein 170B, transcript variant X13
98. SMG7 ENSGALG00000004667 707 0.918 - - - - - 0.918 - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
99. MKNK1 ENSGALG00000010440 196 0.917 - - - - - - - - - 0.917 MAP kinase interacting serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:7110]
100. IL10R2 IL10R2 72 0.914 - - - - - - - 0.914 - -

There are 263 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA