Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TTC1

Gene Name Gene ID Reads Annotation
TTC1 ENSGALG00000001429 1866 tetratricopeptide repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12391]











Genes with expression patterns similar to TTC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TTC1 ENSGALG00000001429 1866 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 tetratricopeptide repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12391]
2. APITD1 APITD1 11830 1.447 - - 0.713 - - - - - - 0.734
3. SNX2 ENSGALG00000005337 590 0.893 - - 0.893 - - - - - - - sorting nexin 2 [Source:NCBI gene;Acc:426797]
4. NLGN1 ENSGALG00000040938 651 0.876 - - 0.876 - - - - - - - neuroligin 1 [Source:NCBI gene;Acc:424980]
5. TRANK1 ENSGALG00000037629 2268 0.873 - - 0.873 - - - - - - - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
6. SLC25A24 ENSGALG00000001938 3671 0.872 - - 0.872 - - - - - - - solute carrier family 25 member 24 [Source:HGNC Symbol;Acc:HGNC:20662]
7. NAT9 ENSGALG00000007723 2098 0.869 - - 0.869 - - - - - - - N-acetyltransferase 9 (putative), transcript variant X7
8. PDCD4 ENSGALG00000008700 574 0.862 - - 0.862 - - - - - - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
9. C-MET C-MET 1650 0.861 - - 0.861 - - - - - - -
10. ZC3H13 ENSGALG00000016984 21043 0.859 - - 0.859 - - - - - - - zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:HGNC:20368]
11. BARX2B BARX2B 1983 0.857 - - 0.857 - - - - - - -
12. DBR1 ENSGALG00000043797 1896 0.852 - - 0.852 - - - - - - - debranching RNA lariats 1 [Source:NCBI gene;Acc:429118]
13. IGDCC4 ENSGALG00000007410 5457 0.851 - - 0.851 - - - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
14. WDR60 1631 0.85 - - 0.850 - - - - - - - WD repeat domain 60, transcript variant X4
15. TMEM200C ENSGALG00000030210 1434 0.849 - - 0.849 - - - - - - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
16. PVALB1 PVALB1 267 0.849 - - 0.849 - - - - - - -
17. CCNB3 ENSGALG00000025810 2115 0.849 - - 0.849 - - - - - - - cyclin B3 [Source:NCBI gene;Acc:396167]
18. WBSCR17 581 0.847 - - 0.847 - - - - - - - Williams-Beuren syndrome chromosome region 17, transcript variant X1
19. WDR47 ENSGALG00000002129 2624 0.84 - - 0.840 - - - - - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
20. BIVM ENSGALG00000016861 3987 0.839 - - 0.839 - - - - - - - basic, immunoglobulin-like variable motif containing [Source:NCBI gene;Acc:374099]
21. RIPPLY3 1380 0.838 - - 0.838 - - - - - - - ripply transcriptional repressor 3
22. CTSO ENSGALG00000009373 4186 0.836 - - 0.836 - - - - - - - cathepsin O [Source:NCBI gene;Acc:422410]
23. PTDSS1 ENSGALG00000030185 5515 0.836 - - 0.836 - - - - - - - phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
24. CDC42BPA ENSGALG00000009158 3926 0.835 - - 0.835 - - - - - - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
25. PTPN5 ENSGALG00000006368 440 0.834 - - 0.834 - - - - - - - protein tyrosine phosphatase, non-receptor type 5 [Source:HGNC Symbol;Acc:HGNC:9657]
26. ETV4 ENSGALG00000036678 2424 0.833 - - 0.833 - - - - - - - ETS variant 4 [Source:HGNC Symbol;Acc:HGNC:3493]
27. PELI1 ENSGALG00000008837 11561 0.832 - - 0.832 - - - - - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
28. DDX18 ENSGALG00000012147 12463 0.831 - - 0.831 - - - - - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
29. PIH1D3 ENSGALG00000004870 1365 0.831 - - 0.831 - - - - - - - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
30. XPC ENSGALG00000006357 2484 0.829 - - 0.829 - - - - - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
31. METTL6 ENSGALG00000040665 4467 0.827 - - 0.827 - - - - - - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
32. PCMTD2 ENSGALG00000005901 1833 0.823 - - 0.823 - - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
33. CHCHD6 ENSGALG00000006056 6121 0.822 - - 0.822 - - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 6 [Source:HGNC Symbol;Acc:HGNC:28184]
34. CASP9 ENSGALG00000001366 1356 0.819 - - 0.819 - - - - - - - caspase 9 [Source:HGNC Symbol;Acc:HGNC:1511]
35. GOLGA2 ENSGALG00000004881 677 0.818 - - 0.818 - - - - - - - golgin A2, transcript variant X7
36. MAN1A1 ENSGALG00000014878 1061 0.818 - - 0.818 - - - - - - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
37. TSEN2 ENSGALG00000004981 1929 0.816 - - 0.816 - - - - - - - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
38. CCDC25 ENSGALG00000016586 351 0.815 - - 0.815 - - - - - - - coiled-coil domain containing 25 [Source:HGNC Symbol;Acc:HGNC:25591]
39. ARFIP2 ENSGALG00000037839 4831 0.814 - - 0.814 - - - - - - - ADP ribosylation factor interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:17160]
40. ALDH3A2 ENSGALG00000004763 3363 0.814 - - 0.814 - - - - - - - aldehyde dehydrogenase 3 family member A2 [Source:NCBI gene;Acc:417615]
41. TSN ENSGALG00000011652 905 0.813 - - 0.813 - - - - - - - translin [Source:NCBI gene;Acc:395955]
42. SULT2B1L1 ENSGALG00000023472 569 0.811 - - 0.811 - - - - - - - sulfotransferase family cytosolic 2B member 1-like 1
43. C8H1ORF52 C8H1ORF52 118 0.809 - - 0.809 - - - - - - -
44. RB1CC1 ENSGALG00000015259 4211 0.809 - - 0.809 - - - - - - - RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
45. PLEKHG5 ENSGALG00000027476 42 0.809 - - 0.809 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
46. GBGT1 ENSGALG00000003340 399 0.809 - - 0.809 - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [Source:NCBI gene;Acc:417163]
47. NCAPD3 ENSGALG00000001491 221 0.809 - - 0.809 - - - - - - - non-SMC condensin II complex subunit D3, transcript variant X3
48. MT1 MT1 218 0.809 - - 0.809 - - - - - - -
49. DLX5 ENSGALG00000009129 1395 0.808 - - 0.808 - - - - - - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
50. POMC ENSGALG00000016600 99 0.807 - - 0.807 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
51. ACOT9 ENSGALG00000016351 330 0.807 - - 0.807 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
52. MGMT ENSGALG00000042949 53 0.807 - - 0.807 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
53. RHOC ENSGALG00000001569 53 0.807 - - 0.807 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
54. GRIK3 ENSGALG00000002098 111 0.805 - - 0.805 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
55. SEC24A ENSGALG00000006417 1805 0.805 - - 0.805 - - - - - - - Gallus gallus SEC24 homolog A, COPII coat complex component (SEC24A), mRNA. [Source:RefSeq mRNA;Acc:NM_001321593]
56. KIAA0195 KIAA0195 48 0.805 - - 0.805 - - - - - - -
57. Sep-02 Sep-02 206 0.805 - - 0.805 - - - - - - -
58. LARS2 ENSGALG00000036309 2624 0.804 - - 0.804 - - - - - - - leucyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17095]
59. ENSGALG00000023180 ENSGALG00000023180 83 0.804 - - 0.804 - - - - - - -
60. ADAMTS2 ENSGALG00000032974 141 0.804 - - 0.804 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
61. AP3M1 ENSGALG00000005070 712 0.803 - - 0.803 - - - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
62. ZEB2 ENSGALG00000040465 315 0.803 - - 0.803 - - - - - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
63. MYO18A ENSGALG00000003741 1023 0.798 - - 0.798 - - - - - - - myosin XVIIIA [Source:HGNC Symbol;Acc:HGNC:31104]
64. ATP2B2 ENSGALG00000030908 584 0.797 - - 0.797 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
65. C19H17ORF85 C19H17ORF85 2538 0.796 - - 0.796 - - - - - - -
66. LHFP 167 0.796 - - 0.796 - - - - - - - lipoma HMGIC fusion partner
67. DEPDC5 ENSGALG00000006766 1592 0.796 - - 0.796 - - - - - - - DEP domain containing 5, transcript variant X6
68. CREBBP ENSGALG00000007762 3050 0.795 - - 0.795 - - - - - - - CREB binding protein [Source:HGNC Symbol;Acc:HGNC:2348]
69. LZIC ENSGALG00000002616 9052 0.795 - - 0.795 - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
70. ENTPD5 ENSGALG00000010202 69 0.795 - - 0.795 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
71. DAPK3 ENSGALG00000037733 6215 0.795 - - 0.795 - - - - - - - death-associated protein kinase 3, transcript variant X2
72. CPT1A ENSGALG00000007077 3199 0.794 - - 0.794 - - - - - - - carnitine palmitoyltransferase 1A [Source:NCBI gene;Acc:423118]
73. SORCS1 ENSGALG00000008465 468 0.793 - - 0.793 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
74. LGALS3 ENSGALG00000012173 3306 0.793 - - 0.793 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
75. TMEM97 ENSGALG00000005702 2037 0.792 - - 0.792 - - - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
76. CROT ENSGALG00000008813 8052 0.792 - - 0.792 - - - - - - - carnitine O-octanoyltransferase [Source:HGNC Symbol;Acc:HGNC:2366]
77. FAM178A FAM178A 2738 0.791 - - 0.791 - - - - - - -
78. C5H14ORF166 C5H14ORF166 24176 0.791 - - 0.791 - - - - - - -
79. EIF4E ENSGALG00000042112 27720 0.789 - - - - - 0.789 - - - - eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:HGNC:3287]
80. BCCIP ENSGALG00000006617 13291 0.787 - - 0.787 - - - - - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
81. COL6A1 ENSGALG00000005974 1991 0.787 - - 0.787 - - - - - - - collagen type VI alpha 1 chain [Source:NCBI gene;Acc:396000]
82. ABHD12 ENSGALG00000008525 5763 0.787 - - 0.787 - - - - - - - abhydrolase domain containing 12 [Source:NCBI gene;Acc:421249]
83. EIF2AK2 ENSGALG00000010560 749 0.786 - - 0.786 - - - - - - - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
84. LRP2 ENSGALG00000010858 363 0.786 - - 0.786 - - - - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
85. SLC35D1 ENSGALG00000011121 4456 0.785 - - 0.785 - - - - - - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
86. FBXO34 ENSGALG00000032563 656 0.785 - - 0.785 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
87. CTNNBIP1 ENSGALG00000026306 8049 0.785 - - 0.785 - - - - - - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
88. BMP2 ENSGALG00000029301 379 0.784 - - 0.784 - - - - - - - bone morphogenetic protein 2 [Source:NCBI gene;Acc:378779]
89. RPUSD1 ENSGALG00000005315 651 0.784 - - 0.784 - - - - - - - RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
90. DLG3 ENSGALG00000041900 3016 0.784 - - 0.784 - - - - - - - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
91. ZNF276 ENSGALG00000000513 2410 0.784 - - 0.784 - - - - - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
92. CASP1 ENSGALG00000001049 1067 0.784 - - 0.784 - - - - - - - caspase 1, transcript variant X2
93. PCP4 ENSGALG00000022819 880 0.784 - - 0.784 - - - - - - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
94. LYPD6B ENSGALG00000028759 831 0.784 - - 0.784 - - - - - - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
95. RAB3B ENSGALG00000010567 894 0.784 - - 0.784 - - - - - - - RAB3B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9778]
96. SLC4A4 ENSGALG00000031105 534 0.783 - - 0.783 - - - - - - - solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
97. MANEA ENSGALG00000015590 2286 0.783 - - 0.783 - - - - - - - mannosidase endo-alpha
98. GNMT ENSGALG00000043290 3288 0.783 - - 0.783 - - - - - - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
99. ERI1 ENSGALG00000011448 3236 0.783 - - 0.783 - - - - - - - exoribonuclease 1 [Source:NCBI gene;Acc:422629]
100. GATAD2A ENSGALG00000042900 6337 0.783 - - 0.783 - - - - - - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]

There are 186 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA