Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TSR1

Gene Name Gene ID Reads Annotation
TSR1 7656 TSR1, ribosome maturation factor











Genes with expression patterns similar to TSR1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TSR1 7656 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TSR1, ribosome maturation factor
2. KDM1A ENSGALG00000033469 20632 1.507 - - - - - - 0.734 0.773 - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
3. AGPS ENSGALG00000009236 2250 1.426 - - - - - - 0.724 - - 0.702 alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
4. PDE3B ENSGALG00000006035 3732 1.414 - - - - - - 0.704 - - 0.710 phosphodiesterase 3B [Source:NCBI gene;Acc:423064]
5. CSRP2BP CSRP2BP 4679 1.409 - - - - - - - 0.702 - 0.707
6. MGAT4B ENSGALG00000005924 2663 0.814 - - - - - - 0.814 - - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
7. CZH5ORF44 CZH5ORF44 2382 0.79 - - - - - - 0.790 - - -
8. HSD17B12 ENSGALG00000036787 11748 0.789 - - - - - - - - - 0.789 hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
9. MRPL38 ENSGALG00000002194 6648 0.787 - - - - - - 0.787 - - - mitochondrial ribosomal protein L38 [Source:NCBI gene;Acc:770172]
10. ENSGALG00000001861 ENSGALG00000001861 10150 0.783 - - - - - - - 0.783 - -
11. TAB2 ENSGALG00000012356 3467 0.78 - - - - - - 0.780 - - - TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
12. SLC35B1 ENSGALG00000035057 10683 0.78 - - - - - - - - - 0.780 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
13. PGM1 ENSGALG00000011016 3391 0.779 - - - - - - 0.779 - - - phosphoglucomutase 1 [Source:NCBI gene;Acc:424691]
14. PSAT1 ENSGALG00000015180 4752 0.779 - - - - - - - 0.779 - - phosphoserine aminotransferase 1 [Source:HGNC Symbol;Acc:HGNC:19129]
15. UMPS ENSGALG00000011770 11331 0.778 - - - - - - 0.778 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
16. RB1CC1 ENSGALG00000015259 4211 0.776 - - - - - - 0.776 - - - RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
17. MED17 ENSGALG00000017218 5821 0.773 - - - - - - 0.773 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
18. SERPINF1 ENSGALG00000003015 5123 0.77 - - - - - - - 0.770 - - serpin family F member 1 [Source:NCBI gene;Acc:417561]
19. USE1 ENSGALG00000003703 4680 0.768 - - - - - - - 0.768 - - unconventional SNARE in the ER 1 [Source:NCBI gene;Acc:420134]
20. gga-mir-6587 ENSGALG00000026386 9441 0.765 - - - - - - 0.765 - - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
21. VWA9 ENSGALG00000007491 4790 0.765 - - - - - - - - - 0.765 von Willebrand factor A domain containing 9 [Source:NCBI gene;Acc:415540]
22. C5orf28 C5orf28 6585 0.765 - - - - - - 0.765 - - -
23. TRMU ENSGALG00000031922 1849 0.762 - - - - - - - 0.762 - - tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Source:NCBI gene;Acc:425909]
24. BRT-1 BRT-1 26083 0.761 - - - - - - - - - 0.761
25. JMJD6 ENSGALG00000001802 5169 0.761 - - - - - - - - - 0.761 jumonji domain containing 6 [Source:NCBI gene;Acc:417355]
26. CRIPT ENSGALG00000010014 4311 0.76 - - - - - - - 0.760 - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
27. PMPCA ENSGALG00000001950 6766 0.759 - - - - - - 0.759 - - - peptidase, mitochondrial processing alpha subunit [Source:NCBI gene;Acc:417134]
28. ATP2B1 ENSGALG00000030550 15123 0.759 - - - - - - 0.759 - - - ATPase plasma membrane Ca2+ transporting 1 [Source:NCBI gene;Acc:374244]
29. IKBKAP 4508 0.759 - - - - - - 0.759 - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
30. LFNG ENSGALG00000038515 5178 0.759 - - - - - - - - - 0.759 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
31. LSM6 ENSGALG00000009985 18582 0.758 - - - - - - - - - 0.758 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
32. HIGD1A ENSGALG00000030775 5724 0.757 - - - - - - - 0.757 - - HIG1 hypoxia inducible domain family member 1A [Source:NCBI gene;Acc:768335]
33. TMLHE ENSGALG00000007443 3619 0.757 - - - - - - 0.757 - - - trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
34. TXNDC12 ENSGALG00000010569 13822 0.756 - - - - - - - - - 0.756 thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
35. HCCS ENSGALG00000005571 4939 0.756 - - - - - - 0.756 - - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
36. DERL1 ENSGALG00000033950 15074 0.755 - - - - - - 0.755 - - - derlin 1 [Source:NCBI gene;Acc:420350]
37. TRIAP1 ENSGALG00000007199 4921 0.755 - - - - - - 0.755 - - - TP53 regulated inhibitor of apoptosis 1 [Source:NCBI gene;Acc:416977]
38. WDR3 ENSGALG00000014791 5856 0.754 - - - - - - - 0.754 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
39. DUS3L ENSGALG00000001800 2102 0.754 - - - - - - 0.754 - - - dihydrouridine synthase 3 like, transcript variant X2
40. ACAP2 ENSGALG00000007040 4182 0.753 - - - - - - - - - 0.753 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
41. WRNIP1 ENSGALG00000012856 1954 0.752 - - - - - - - - - 0.752 Werner helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876]
42. RRP15 ENSGALG00000009615 3652 0.752 - - - - - - 0.752 - - - ribosomal RNA processing 15 homolog [Source:HGNC Symbol;Acc:HGNC:24255]
43. OCRL ENSGALG00000003920 1812 0.752 - - - - - - - 0.752 - - OCRL, inositol polyphosphate-5-phosphatase [Source:HGNC Symbol;Acc:HGNC:8108]
44. HMGB3 ENSGALG00000009071 12011 0.751 - - - - - - 0.751 - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
45. ITGB1 ENSGALG00000007145 19551 0.75 - - - - - - 0.750 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
46. GOT2 ENSGALG00000002321 4961 0.75 - - - - - - - - - 0.750 glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
47. USP15 ENSGALG00000030024 2761 0.75 - - - - - - 0.750 - - - ubiquitin specific peptidase 15 [Source:NCBI gene;Acc:395644]
48. M6PR ENSGALG00000031681 9442 0.75 - - - - - - - - - 0.750 mannose-6-phosphate receptor, cation dependent, transcript variant X3
49. TRAF7 ENSGALG00000005767 4615 0.748 - - - - - - 0.748 - - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
50. TPRG1L ENSGALG00000001024 9809 0.748 - - - - - - 0.748 - - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
51. ARHGAP21 ENSGALG00000007721 3961 0.747 - - - - - - - 0.747 - - Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
52. SH3BGRL3 ENSGALG00000038536 18187 0.747 - - - - - - 0.747 - - - SH3 domain binding glutamate rich protein like 3 [Source:NCBI gene;Acc:768795]
53. CCT4 ENSGALG00000008812 78267 0.747 - - - - - - - - - 0.747 chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
54. ESRRG ENSGALG00000009645 2783 0.745 - - - - - - - - - 0.745 estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
55. BET1L ENSGALG00000004172 5305 0.745 - - - - - - 0.745 - - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
56. NANS ENSGALG00000015320 10552 0.745 - - - - - - - 0.745 - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
57. C9orf89 C9orf89 3056 0.745 - - - - - - - - - 0.745
58. ACO2 ENSGALG00000011950 30387 0.745 - - - - - - - - - 0.745 aconitase 2 [Source:NCBI gene;Acc:374009]
59. B3GALTL B3GALTL 4128 0.744 - - - - - - - - - 0.744
60. KIAA0355 ENSGALG00000004949 4352 0.744 - - - - - - 0.744 - - - KIAA0355 [Source:HGNC Symbol;Acc:HGNC:29016]
61. MPDZ ENSGALG00000005846 3179 0.743 - - - - - - 0.743 - - - multiple PDZ domain protein [Source:NCBI gene;Acc:427360]
62. CCZ1 ENSGALG00000003458 4482 0.743 - - - - - - 0.743 - - - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:NCBI gene;Acc:416433]
63. LOC770492 ENSGALG00000027778 695 0.742 - - - - - - - - - 0.742 ras-related and estrogen-regulated growth inhibitor-like
64. CLPX ENSGALG00000007289 6348 0.742 - - - - - - 0.742 - - - caseinolytic mitochondrial matrix peptidase chaperone subunit [Source:NCBI gene;Acc:415527]
65. RRP1B ENSGALG00000035696 12309 0.741 - - - - - - - 0.741 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
66. RPA3 ENSGALG00000010700 6212 0.74 - - - - - - - 0.740 - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
67. DDX1 ENSGALG00000016461 15157 0.74 - - - - - - - - - 0.740 DEAD-box helicase 1 [Source:NCBI gene;Acc:395249]
68. KIDINS220 ENSGALG00000016409 854 0.739 - - - - - - - - - 0.739 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
69. ATP6V0C ENSGALG00000009229 125870 0.737 - - - - - - - - - 0.737 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
70. CDH1-A CDH1-A 343 0.736 - - - - - - - - - 0.736
71. INCENP ENSGALG00000007537 16617 0.735 - - - - - - - 0.735 - - inner centromere protein [Source:NCBI gene;Acc:396270]
72. CCDC51 ENSGALG00000006465 1845 0.735 - - - - - - - - - 0.735 coiled-coil domain containing 51, transcript variant X1
73. GPALPP1 ENSGALG00000031567 4221 0.735 - - - - - - 0.735 - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
74. KDM6A ENSGALG00000016217 2302 0.735 - - - - - - - 0.735 - - lysine demethylase 6A, transcript variant X14
75. DCAF5 ENSGALG00000009463 1297 0.734 - - - - - - - - - 0.734 DDB1 and CUL4 associated factor 5 [Source:HGNC Symbol;Acc:HGNC:20224]
76. MED24 ENSGALG00000013506 5403 0.734 - - - - - - - - - 0.734 mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
77. BNIP3L ENSGALG00000043405 10316 0.733 - - - - - - 0.733 - - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
78. AVL9 ENSGALG00000041568 1558 0.733 - - - - - - 0.733 - - - AVL9 cell migration associated [Source:HGNC Symbol;Acc:HGNC:28994]
79. TTC19 ENSGALG00000004416 1875 0.733 - - - - - - - - - 0.733 tetratricopeptide repeat domain 19 [Source:HGNC Symbol;Acc:HGNC:26006]
80. MRPL50 ENSGALG00000015543 11649 0.733 - - - - - - - - - 0.733 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
81. SGSH ENSGALG00000007027 1115 0.732 - - - - - - - - - 0.732 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
82. TST ENSGALG00000012488 5314 0.732 - - - - - - 0.732 - - - thiosulfate sulfurtransferase [Source:NCBI gene;Acc:418049]
83. DNTTIP2 4528 0.732 - - - - - - - 0.732 - - deoxynucleotidyltransferase, terminal, interacting protein 2, transcript variant X3
84. RPGRIP1L 1006 0.731 - - - - - - - 0.731 - - RPGRIP1 like, transcript variant X5
85. SLC25A36 ENSGALG00000005283 4221 0.731 - - - - - - 0.731 - - - solute carrier family 25 member 36 [Source:NCBI gene;Acc:424817]
86. FTSJ3 ENSGALG00000032993 8929 0.731 - - - - - - 0.731 - - - FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
87. FBXO21 ENSGALG00000008201 2608 0.73 - - - - - - - - - 0.730 F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
88. SLC27A4 ENSGALG00000004965 3278 0.73 - - - - - - 0.730 - - - solute carrier family 27 member 4 [Source:HGNC Symbol;Acc:HGNC:10998]
89. ITGB3BP ENSGALG00000010995 3754 0.73 - - - - - - 0.730 - - - integrin subunit beta 3 binding protein [Source:NCBI gene;Acc:424689]
90. NXT2 ENSGALG00000008092 2477 0.729 - - - - - - 0.729 - - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
91. NSUN2 ENSGALG00000013064 2005 0.728 - - - - - - 0.728 - - - NOP2/Sun RNA methyltransferase family member 2 [Source:NCBI gene;Acc:420938]
92. SLC39A13 ENSGALG00000008122 2003 0.728 - - - - - - - - - 0.728 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
93. HELLS ENSGALG00000005451 7094 0.728 - - - - - - - - - 0.728 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
94. ENSGALG00000026433 ENSGALG00000026433 14463 0.728 - - - - - - - - - 0.728
95. C11H16ORF80 C11H16ORF80 18673 0.728 - - - - - - - 0.728 - -
96. RRAGC ENSGALG00000033079 4966 0.728 - - - - - - - - - 0.728 Ras related GTP binding C [Source:NCBI gene;Acc:419605]
97. MRPL47 ENSGALG00000013759 9044 0.728 - - - - - - 0.728 - - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
98. ZFYVE1 ENSGALG00000009338 2061 0.728 - - - - - - 0.728 - - - zinc finger FYVE-type containing 1 [Source:NCBI gene;Acc:423252]
99. POLR3F ENSGALG00000008749 5645 0.728 - - - - - - - 0.728 - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
100. GRK4 ENSGALG00000015645 1065 0.727 - - - - - - - - - 0.727 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]

There are 165 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA