Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TSEN54

Gene Name Gene ID Reads Annotation
TSEN54 3192 tRNA splicing endonuclease subunit 54, transcript variant X2











Genes with expression patterns similar to TSEN54

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TSEN54 3192 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tRNA splicing endonuclease subunit 54, transcript variant X2
2. RRP1B ENSGALG00000035696 12309 2.244 - - - - - - 0.772 0.733 0.739 - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
3. SETD3 ENSGALG00000034802 4125 1.545 - - - - - - 0.821 0.724 - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
4. DAD1 ENSGALG00000035626 32604 1.533 - - - - - - 0.815 0.718 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
5. NOP16 ENSGALG00000003355 10692 1.486 - - - - - - 0.770 0.716 - - NOP16 nucleolar protein
6. SNX7 ENSGALG00000005478 4736 1.444 - - - - - - 0.719 0.725 - - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
7. BPNT1 ENSGALG00000009576 7445 1.437 - - - - - - 0.704 0.733 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
8. TAF7 4725 0.861 - - - - - - 0.861 - - - TATA-box binding protein associated factor 7, transcript variant X1
9. TFDP1 ENSGALG00000016823 17019 0.844 - - - - - - 0.844 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
10. LAPTM4A ENSGALG00000016479 15973 0.84 - - - - - - 0.840 - - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
11. KIAA0020 KIAA0020 14353 0.836 - - - - - - 0.836 - - -
12. CLNS1A ENSGALG00000008574 25675 0.825 - - - - - - 0.825 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
13. MAK16 ENSGALG00000001663 7455 0.824 - - - - - - 0.824 - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
14. MRPL40 ENSGALG00000001587 20893 0.822 - - - - - - 0.822 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
15. ANAPC1 ENSGALG00000008254 2519 0.821 - - - - - - 0.821 - - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
16. CHTF8 ENSGALG00000000632 7230 0.819 - - - - - - 0.819 - - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
17. TSEN15 ENSGALG00000004782 2520 0.817 - - - - - - 0.817 - - - tRNA splicing endonuclease subunit 15 [Source:HGNC Symbol;Acc:HGNC:16791]
18. ANKRD49 ENSGALG00000017210 3247 0.813 - - - - - - 0.813 - - - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
19. C14orf80 C14orf80 1921 0.812 - - - - - - - 0.812 - -
20. RNF111 ENSGALG00000004171 2696 0.811 - - - - - - 0.811 - - - ring finger protein 111 [Source:NCBI gene;Acc:374021]
21. DCAF7 ENSGALG00000000510 8681 0.811 - - - - - - 0.811 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
22. SLC25A20 ENSGALG00000028227 7685 0.81 - - - - - - 0.810 - - - solute carrier family 25 member 20 [Source:HGNC Symbol;Acc:HGNC:1421]
23. WBSCR22 6082 0.808 - - - - - - 0.808 - - - Williams-Beuren syndrome chromosome region 22
24. BIRC6 ENSGALG00000010541 7999 0.808 - - - - - - 0.808 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
25. PTTG1 17936 0.806 - - - - - - 0.806 - - - pituitary tumor-transforming 1, transcript variant X1
26. MAP4K3 ENSGALG00000039720 5124 0.805 - - - - - - 0.805 - - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
27. GMPPB ENSGALG00000002500 9454 0.805 - - - - - - 0.805 - - - GDP-mannose pyrophosphorylase B [Source:NCBI gene;Acc:415924]
28. MRPL39 ENSGALG00000015742 7025 0.803 - - - - - - 0.803 - - - mitochondrial ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:14027]
29. RTCB ENSGALG00000012611 14360 0.802 - - - - - - 0.802 - - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
30. SDHD ENSGALG00000007878 25129 0.801 - - - - - - 0.801 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
31. ZZZ3 ENSGALG00000008988 3132 0.801 - - - - - - 0.801 - - - zinc finger ZZ-type containing 3, transcript variant X5
32. FXR1 ENSGALG00000008864 10250 0.801 - - - - - - 0.801 - - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
33. C12ORF57 C12ORF57 25906 0.8 - - - - - - 0.800 - - -
34. NDUFC2 ENSGALG00000029172 26136 0.799 - - - - - - 0.799 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
35. EIF3B ENSGALG00000040999 49971 0.798 - - - - - - 0.798 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
36. CABLES1 ENSGALG00000014998 1636 0.798 - - - - - - 0.798 - - - Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
37. CCNH ENSGALG00000015641 8051 0.797 - - - - - - 0.797 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
38. SECISBP2 ENSGALG00000010694 6990 0.794 - - - - - - 0.794 - - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
39. DROSHA ENSGALG00000012916 2310 0.793 - - - - - - 0.793 - - - drosha ribonuclease III [Source:NCBI gene;Acc:420911]
40. FAM125B FAM125B 2953 0.793 - - - - - - 0.793 - - -
41. DNAJC3 ENSGALG00000016894 9048 0.792 - - - - - - 0.792 - - - DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
42. R3HDM1 ENSGALG00000012246 6580 0.792 - - - - - - 0.792 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
43. AP1S3 ENSGALG00000005171 2981 0.791 - - - - - - - 0.791 - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
44. RAB21 ENSGALG00000010183 7718 0.79 - - - - - - 0.790 - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
45. GTLF3B GTLF3B 5079 0.79 - - - - - - 0.790 - - -
46. DHX38 ENSGALG00000000787 6913 0.789 - - - - - - 0.789 - - - DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
47. MCM3AP ENSGALG00000004363 3247 0.789 - - - - - - 0.789 - - - minichromosome maintenance complex component 3 associated protein [Source:HGNC Symbol;Acc:HGNC:6946]
48. FNBP1L ENSGALG00000005850 9219 0.788 - - - - - - 0.788 - - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
49. SLC30A5 ENSGALG00000014787 5573 0.787 - - - - - - 0.787 - - - solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
50. SNRNP27 ENSGALG00000013883 22212 0.787 - - - - - - 0.787 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
51. RPA3 ENSGALG00000010700 6212 0.786 - - - - - - - 0.786 - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
52. NR2C1 ENSGALG00000011327 5109 0.786 - - - - - - 0.786 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
53. USE1 ENSGALG00000003703 4680 0.785 - - - - - - - 0.785 - - unconventional SNARE in the ER 1 [Source:NCBI gene;Acc:420134]
54. HMGN3 ENSGALG00000015880 30919 0.785 - - - - - - 0.785 - - - high mobility group nucleosomal binding domain 3 [Source:NCBI gene;Acc:421853]
55. DCUN1D1 ENSGALG00000008807 6545 0.784 - - - - - - 0.784 - - - defective in cullin neddylation 1 domain containing 1 [Source:NCBI gene;Acc:424963]
56. BLCAP ENSGALG00000027126 12200 0.781 - - - - - - 0.781 - - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
57. HARS ENSGALG00000035080 11602 0.78 - - - - - - 0.780 - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
58. RSL1D1 ENSGALG00000033690 13638 0.78 - - - - - - 0.780 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
59. TM9SF2L ENSGALG00000006487 5566 0.78 - - - - - - 0.780 - - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
60. SCO1 ENSGALG00000030475 7304 0.779 - - - - - - - - 0.779 - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
61. KLHL21 ENSGALG00000035211 6145 0.778 - - - - - - 0.778 - - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
62. FAM63B 3793 0.777 - - - - - - 0.777 - - - family with sequence similarity 63 member B
63. UPF2 ENSGALG00000033772 9548 0.777 - - - - - - 0.777 - - - UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
64. THUMPD3 ENSGALG00000008394 17711 0.777 - - - - - - 0.777 - - - THUMP domain containing 3, transcript variant X2
65. WDR45B ENSGALG00000001563 5870 0.776 - - - - - - 0.776 - - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
66. CLN8 ENSGALG00000039606 4209 0.776 - - - - - - 0.776 - - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
67. CYB5B ENSGALG00000000660 9733 0.776 - - - - - - 0.776 - - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
68. DNTTIP1 ENSGALG00000003575 4687 0.775 - - - - - - 0.775 - - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
69. TTLL5 ENSGALG00000010340 4875 0.774 - - - - - - - - 0.774 - tubulin tyrosine ligase like 5 [Source:NCBI gene;Acc:423367]
70. SNX5 ENSGALG00000008691 2108 0.774 - - - - - - 0.774 - - - sorting nexin 5 [Source:NCBI gene;Acc:416718]
71. PGAM5 ENSGALG00000002137 7700 0.774 - - - - - - 0.774 - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
72. FAM160B1 ENSGALG00000031404 3153 0.774 - - - - - - 0.774 - - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
73. ENSGALG00000001861 ENSGALG00000001861 10150 0.774 - - - - - - - 0.774 - -
74. OSTC ENSGALG00000010526 19422 0.773 - - - - - - 0.773 - - - oligosaccharyltransferase complex non-catalytic subunit [Source:NCBI gene;Acc:422525]
75. ECI2 ENSGALG00000012809 3692 0.773 - - - - - - 0.773 - - - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
76. YRDC ENSGALG00000029001 6529 0.772 - - - - - - 0.772 - - - yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
77. SYAP1 ENSGALG00000016548 3347 0.772 - - - - - - 0.772 - - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
78. DAP3 ENSGALG00000019796 13278 0.772 - - - - - - 0.772 - - - death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
79. SEC24C ENSGALG00000005181 11132 0.772 - - - - - - 0.772 - - - SEC24 homolog C, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10705]
80. CEP76 ENSGALG00000013858 1809 0.772 - - - - - - 0.772 - - - centrosomal protein 76
81. NOP58 ENSGALG00000008454 34630 0.772 - - - - - - 0.772 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
82. ARHGEF7 ENSGALG00000031009 10090 0.771 - - - - - - 0.771 - - - Rho guanine nucleotide exchange factor 7 [Source:HGNC Symbol;Acc:HGNC:15607]
83. RAB9A ENSGALG00000016579 3262 0.771 - - - - - - 0.771 - - - RAB9A, member RAS oncogene family [Source:NCBI gene;Acc:418635]
84. PRORSD1P ENSGALG00000034854 2924 0.77 - - - - - - 0.770 - - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
85. BCAP29 ENSGALG00000008009 8519 0.77 - - - - - - 0.770 - - - B cell receptor associated protein 29 [Source:NCBI gene;Acc:417702]
86. IBTK ENSGALG00000015864 3154 0.769 - - - - - - 0.769 - - - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
87. TRAIP ENSGALG00000002908 6901 0.768 - - - - - - 0.768 - - - TRAF interacting protein [Source:NCBI gene;Acc:415927]
88. SIAH2 ENSGALG00000010395 2126 0.767 - - - - - - 0.767 - - - siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
89. CDC40 ENSGALG00000015061 6118 0.766 - - - - - - 0.766 - - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
90. CHST14 ENSGALG00000026531 7957 0.766 - - - - - - 0.766 - - - carbohydrate sulfotransferase 14
91. FRA10AC1 ENSGALG00000006622 286 0.766 - - - - - - - - 0.766 - FRA10A associated CGG repeat 1 [Source:HGNC Symbol;Acc:HGNC:1162]
92. WDR51B WDR51B 5757 0.765 - - - - - - 0.765 - - -
93. PPP2R5D ENSGALG00000040005 6804 0.765 - - - - - - 0.765 - - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
94. N6AMT1 ENSGALG00000015802 5221 0.765 - - - - - - - 0.765 - - N-6 adenine-specific DNA methyltransferase 1 (putative) [Source:NCBI gene;Acc:418481]
95. COX11 ENSGALG00000027190 4475 0.764 - - - - - - - 0.764 - - cytochrome c oxidase copper chaperone COX11 [Source:HGNC Symbol;Acc:HGNC:2261]
96. KBTBD2 ENSGALG00000038704 2821 0.764 - - - - - - 0.764 - - - kelch repeat and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21751]
97. LMAN2 ENSGALG00000033232 11740 0.763 - - - - - - 0.763 - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
98. FAM98A ENSGALG00000010428 9585 0.763 - - - - - - 0.763 - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
99. ARID4B ENSGALG00000034003 5364 0.763 - - - - - - 0.763 - - - AT-rich interaction domain 4B [Source:HGNC Symbol;Acc:HGNC:15550]
100. EED ENSGALG00000014060 6467 0.763 - - - - - - 0.763 - - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]

There are 292 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA