Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRUB2

Gene Name Gene ID Reads Annotation
TRUB2 ENSGALG00000004920 5425 TruB pseudouridine synthase family member 2 [Source:HGNC Symbol;Acc:HGNC:17170]











Genes with expression patterns similar to TRUB2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRUB2 ENSGALG00000004920 5425 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TruB pseudouridine synthase family member 2 [Source:HGNC Symbol;Acc:HGNC:17170]
2. VAMP4 ENSGALG00000031381 4289 1.521 - - - - - 0.761 - 0.760 - - vesicle associated membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:12645]
3. ZCCHC9 ENSGALG00000015603 3118 1.486 - - - - - - 0.770 0.716 - - zinc finger CCHC-type containing 9 [Source:HGNC Symbol;Acc:HGNC:25424]
4. ENSGALG00000027884 ENSGALG00000027884 20249 1.455 - - - - - - 0.726 0.729 - -
5. SF3B3 ENSGALG00000002531 19397 1.454 - - - - - - 0.730 0.724 - - splicing factor 3b subunit 3, transcript variant X2
6. TAF1A ENSGALG00000009441 2431 1.45 - - - - - 0.734 0.716 - - - TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
7. SDF2L1 ENSGALG00000031982 6084 1.412 - - - - - - 0.705 0.707 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
8. KLF4 ENSGALG00000026928 184 0.888 - - - - - 0.888 - - - - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
9. RGS13 ENSGALG00000026810 8 0.87 - - - - - 0.870 - - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
10. B3GALT1 ENSGALG00000010931 6 0.87 - - - - - 0.870 - - - - beta-1,3-galactosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:916]
11. PCGF2 ENSGALG00000018815 38 0.87 - - - - - 0.870 - - - - polycomb group ring finger 2 [Source:NCBI gene;Acc:425919]
12. ENSGALG00000027565 ENSGALG00000027565 2 0.87 - - - - - 0.870 - - - -
13. CASP10 ENSGALG00000046494 2 0.87 - - - - - 0.870 - - - - caspase 10 [Source:HGNC Symbol;Acc:HGNC:1500]
14. OMG ENSGALG00000005594 3 0.87 - - - - - 0.870 - - - - oligodendrocyte myelin glycoprotein [Source:HGNC Symbol;Acc:HGNC:8135]
15. ENSGALG00000022892 ENSGALG00000022892 3 0.87 - - - - - 0.870 - - - -
16. KIAA2013 ENSGALG00000004533 8 0.87 - - - - - 0.870 - - - - KIAA2013 [Source:HGNC Symbol;Acc:HGNC:28513]
17. TSGA10 ENSGALG00000016757 4 0.87 - - - - - 0.870 - - - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
18. MYO5C ENSGALG00000033198 36 0.87 - - - - - 0.870 - - - - myosin VC [Source:HGNC Symbol;Acc:HGNC:7604]
19. MATK ENSGALG00000000736 4 0.87 - - - - - 0.870 - - - - megakaryocyte-associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6906]
20. ENSGALG00000019491 ENSGALG00000019491 1 0.87 - - - - - 0.870 - - - -
21. KIAA1024L ENSGALG00000027692 20 0.87 - - - - - 0.870 - - - - KIAA1024 like [Source:HGNC Symbol;Acc:HGNC:33914]
22. ENSGALG00000021716 ENSGALG00000021716 5 0.87 - - - - - 0.870 - - - -
23. PARM1 ENSGALG00000010268 13 0.87 - - - - - 0.870 - - - - prostate androgen-regulated mucin-like protein 1 [Source:HGNC Symbol;Acc:HGNC:24536]
24. ITK ENSGALG00000003857 1 0.87 - - - - - 0.870 - - - - IL2 inducible T cell kinase [Source:HGNC Symbol;Acc:HGNC:6171]
25. PCBP3 ENSGALG00000004394 5 0.87 - - - - - 0.870 - - - - poly(rC) binding protein 3, transcript variant X32
26. PROZ ENSGALG00000016832 6 0.87 - - - - - 0.870 - - - - protein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]
27. PTPRF ENSGALG00000010053 27 0.861 - - - - - 0.861 - - - - protein tyrosine phosphatase, receptor type F [Source:HGNC Symbol;Acc:HGNC:9670]
28. INTS6L ENSGALG00000006157 2303 0.86 - - - - - 0.860 - - - - integrator complex subunit 6 like, transcript variant X6
29. USP53 ENSGALG00000011990 12 0.851 - - - - - 0.851 - - - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
30. ABHD10 ENSGALG00000015378 12 0.851 - - - - - 0.851 - - - - abhydrolase domain containing 10 [Source:HGNC Symbol;Acc:HGNC:25656]
31. KIAA1045 KIAA1045 23 0.85 - - - - - 0.850 - - - -
32. SENP7 ENSGALG00000044642 48 0.849 - - - - - 0.849 - - - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
33. RUNDC3B ENSGALG00000008954 924 0.849 - - - - - 0.849 - - - - RUN domain containing 3B [Source:NCBI gene;Acc:420535]
34. ENSGALG00000028962 ENSGALG00000028962 7 0.847 - - - - - 0.847 - - - -
35. CNTF ENSGALG00000026207 47 0.844 - - - - - 0.844 - - - - ciliary neurotrophic factor [Source:NCBI gene;Acc:396488]
36. ENSGALG00000026155 ENSGALG00000026155 49 0.836 - - - - - 0.836 - - - -
37. C1QTNF6 ENSGALG00000027067 493 0.833 - - - - - 0.833 - - - - C1q and TNF related 6 [Source:HGNC Symbol;Acc:HGNC:14343]
38. TMEM45BL ENSGALG00000024296 5 0.831 - - - - - 0.831 - - - - transmembrane protein 45B-like
39. IL12RB1 28 0.824 - - - - - 0.824 - - - - interleukin 12 receptor subunit beta 1, transcript variant X4
40. FANCL ENSGALG00000030022 7423 0.822 - - - - - - - 0.822 - - FA complementation group L [Source:NCBI gene;Acc:421202]
41. CDH10 ENSGALG00000032022 37 0.819 - - - - - 0.819 - - - - cadherin 10 [Source:NCBI gene;Acc:408049]
42. HPS3 ENSGALG00000040089 44 0.816 - - 0.816 - - - - - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
43. TMEM207 ENSGALG00000026953 7 0.814 - - - - - 0.814 - - - - transmembrane protein 207 [Source:NCBI gene;Acc:424909]
44. FRMPD4 ENSGALG00000033541 163 0.812 - - - - - 0.812 - - - - FERM and PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:29007]
45. HAVCR1 ENSGALG00000017362 25 0.811 - - - - - 0.811 - - - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
46. LOC422147 ENSGALG00000004113 30 0.811 - - - - - 0.811 - - - - putative P2Y purinoceptor 10-like
47. RPS6KA6 ENSGALG00000007097 94 0.81 - - - - - 0.810 - - - - ribosomal protein S6 kinase A6 [Source:HGNC Symbol;Acc:HGNC:10435]
48. IMPACT ENSGALG00000015093 1334 0.805 - - - - - 0.805 - - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
49. PRKCE ENSGALG00000010000 99 0.8 - - 0.800 - - - - - - - protein kinase C epsilon, transcript variant X1
50. SPRTN ENSGALG00000011065 24 0.797 - - - - - 0.797 - - - - SprT-like N-terminal domain [Source:HGNC Symbol;Acc:HGNC:25356]
51. MED28 ENSGALG00000007138 7686 0.795 - - - - - - 0.795 - - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
52. KIDINS220 ENSGALG00000016409 854 0.793 - - 0.793 - - - - - - - kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
53. FLRT2 ENSGALG00000010589 490 0.791 - - - - - 0.791 - - - - fibronectin leucine rich transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3761]
54. INSRR ENSGALG00000013253 54 0.791 - - - - - 0.791 - - - - insulin receptor related receptor [Source:HGNC Symbol;Acc:HGNC:6093]
55. ZNF341 ENSGALG00000002968 1028 0.79 - - 0.790 - - - - - - - zinc finger protein 341 [Source:NCBI gene;Acc:419152]
56. POLE3 ENSGALG00000008873 9161 0.789 - - - - - - 0.789 - - - DNA polymerase epsilon 3, accessory subunit [Source:NCBI gene;Acc:417275]
57. NT5C1B ENSGALG00000016471 1378 0.789 - - - - - 0.789 - - - - 5'-nucleotidase, cytosolic IB
58. ZNF516 ENSGALG00000013660 34 0.788 - - - - - 0.788 - - - - zinc finger protein 516 [Source:HGNC Symbol;Acc:HGNC:28990]
59. SNRPA1 ENSGALG00000007170 17764 0.785 - - - - - - 0.785 - - - small nuclear ribonucleoprotein polypeptide A' [Source:NCBI gene;Acc:415523]
60. CLEC3B ENSGALG00000030969 363 0.784 - - 0.784 - - - - - - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
61. GLB1L2 ENSGALG00000001604 4057 0.784 - - - - - - 0.784 - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
62. SPCS2 ENSGALG00000019036 9496 0.783 - - - - - - - 0.783 - - signal peptidase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28962]
63. CCDC141 ENSGALG00000020788 606 0.783 - - - - - 0.783 - - - - coiled-coil domain containing 141, transcript variant X5
64. LYRM5 LYRM5 1269 0.78 - - - - - 0.780 - - - -
65. NIP7 ENSGALG00000000650 23932 0.78 - - - - - - - 0.780 - - NIP7, nucleolar pre-rRNA processing protein [Source:NCBI gene;Acc:415863]
66. ATRNL1 ENSGALG00000009152 646 0.78 - - - - - - - 0.780 - - attractin like 1 [Source:HGNC Symbol;Acc:HGNC:29063]
67. ATP13A2 ENSGALG00000003774 271 0.776 - - - - - 0.776 - - - - ATPase 13A2 [Source:NCBI gene;Acc:419466]
68. VSNL1 ENSGALG00000016464 19 0.773 - - - - - 0.773 - - - - visinin like 1 [Source:NCBI gene;Acc:396189]
69. FANCB ENSGALG00000016569 1193 0.773 - - 0.773 - - - - - - - FA complementation group B [Source:NCBI gene;Acc:418628]
70. NMNAT1 ENSGALG00000043318 471 0.773 - - 0.773 - - - - - - - nicotinamide nucleotide adenylyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:17877]
71. RFC5 ENSGALG00000026517 26113 0.773 - - - - - - 0.773 - - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
72. EBNA1BP2 ENSGALG00000009045 17453 0.772 - - - - - - 0.772 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
73. SUV39H2 ENSGALG00000013920 4360 0.772 - - - - - - - 0.772 - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
74. API5 ENSGALG00000037968 18265 0.771 - - - - - - 0.771 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
75. LRRC43 LRRC43 16 0.771 - - - - - 0.771 - - - -
76. RPB6 RPB6 9517 0.77 - - - - - - 0.770 - - -
77. PRR15L ENSGALG00000046413 27 0.769 - - - - - 0.769 - - - - proline rich 15 like [Source:HGNC Symbol;Acc:HGNC:28149]
78. SH3YL1 ENSGALG00000016362 1723 0.769 - - - - - 0.769 - - - - SH3 and SYLF domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29546]
79. CHP1 ENSGALG00000008569 6876 0.768 - - - - - - 0.768 - - - calcineurin like EF-hand protein 1 [Source:NCBI gene;Acc:423211]
80. SNTG1 ENSGALG00000015248 23 0.767 - - - - - 0.767 - - - - syntrophin gamma 1 [Source:HGNC Symbol;Acc:HGNC:13740]
81. RCOR3 ENSGALG00000009871 7022 0.766 - - - - - - 0.766 - - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
82. ENSGALG00000005870 ENSGALG00000005870 4343 0.765 - - - - - - - 0.765 - -
83. KSR1 ENSGALG00000005685 78 0.765 - - - - - 0.765 - - - - kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]
84. RANBP10 ENSGALG00000001439 4003 0.765 - - - - - - 0.765 - - - RAN binding protein 10 [Source:HGNC Symbol;Acc:HGNC:29285]
85. NCBP2_1 ENSGALG00000006843 7170 0.765 - - - - - - - 0.765 - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
86. PKD2 ENSGALG00000010921 55 0.765 - - 0.765 - - - - - - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
87. FBXO5 ENSGALG00000013607 6156 0.764 - - - - - - 0.764 - - - F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
88. SKA3 ENSGALG00000017128 4176 0.76 - - - - - - - 0.760 - - spindle and kinetochore associated complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:20262]
89. HGF/SF HGF/SF 345 0.759 - - - - - - - 0.759 - -
90. C10orf88 ENSGALG00000000011 6026 0.759 - - - - - - - 0.759 - - chromosome 10 open reading frame 88 [Source:HGNC Symbol;Acc:HGNC:25822]
91. EPHA1 ENSGALG00000014687 174 0.759 - - 0.759 - - - - - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
92. BAG4 ENSGALG00000003254 5751 0.759 - - - - - - - - - 0.759 BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
93. MLX ENSGALG00000003199 5286 0.758 - - - - - - 0.758 - - - MLX, MAX dimerization protein [Source:NCBI gene;Acc:420026]
94. PLEKHA5 ENSGALG00000013134 3656 0.758 - - 0.758 - - - - - - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
95. TMX4 ENSGALG00000028587 3513 0.758 - - - - - - - 0.758 - - thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
96. C1QBP ENSGALG00000001654 34814 0.757 - - 0.757 - - - - - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
97. HNRNPD ENSGALG00000011184 10686 0.757 - - 0.757 - - - - - - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
98. PTK2 ENSGALG00000031741 13103 0.756 - - - - - - 0.756 - - - protein tyrosine kinase 2 [Source:NCBI gene;Acc:396416]
99. ILF2 ENSGALG00000011570 23050 0.756 - - - - - - 0.756 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
100. B4GALT6 ENSGALG00000015151 2770 0.756 - - - - - - 0.756 - - - beta-1,4-galactosyltransferase 6 [Source:NCBI gene;Acc:421092]

There are 228 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA