Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRUB1

Gene Name Gene ID Reads Annotation
TRUB1 ENSGALG00000009091 1005 TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]











Genes with expression patterns similar to TRUB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRUB1 ENSGALG00000009091 1005 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
2. PTDSS2 ENSGALG00000004300 682 1.82 - - 0.892 - - - - 0.928 - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
3. MIB1 ENSGALG00000014974 3583 1.693 - - 0.858 - - - - - 0.835 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
4. GLB1L2 ENSGALG00000001604 4057 1.692 - - 0.829 - - - - 0.863 - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
5. ZNF618 ENSGALG00000008886 1326 1.689 - - - - - - - - 0.797 0.892 zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
6. RRN3 ENSGALG00000041989 3934 1.686 - - 0.864 - - - - - - 0.822 RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
7. SLC3A1 ENSGALG00000009973 608 1.685 - - 0.899 - - - - 0.786 - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
8. RAD54L2 ENSGALG00000003243 187 1.622 - - 0.902 - - - - - - 0.720 RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
9. AKAP10 ENSGALG00000004679 103 1.617 - - 0.894 - - - - - - 0.723 A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
10. STAMBP ENSGALG00000042555 1362 1.611 - - 0.869 0.742 - - - - - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
11. DEF8 ENSGALG00000025712 790 1.577 - - - 0.725 - - - - 0.852 - differentially expressed in FDCP 8 homolog [Source:HGNC Symbol;Acc:HGNC:25969]
12. ATP6V0A2 ENSGALG00000003194 4824 1.575 - - 0.849 - - - - - 0.726 - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
13. ZNF335 ENSGALG00000041370 4740 1.572 - - 0.737 - - - - 0.835 - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
14. DNAJC24 ENSGALG00000012130 1882 1.547 - - 0.832 - - - - - - 0.715 DnaJ heat shock protein family (Hsp40) member C24 [Source:NCBI gene;Acc:421603]
15. PON2 ENSGALG00000009689 1416 1.545 - - - - - - - 0.701 - 0.844 paraoxonase 2 [Source:NCBI gene;Acc:395830]
16. NPM1 ENSGALG00000002197 24109 1.526 - - 0.726 - - - - - 0.800 - nucleophosmin [Source:NCBI gene;Acc:396203]
17. GOSR1 ENSGALG00000004326 1556 1.516 - - 0.704 - - - - 0.812 - - golgi SNAP receptor complex member 1 [Source:NCBI gene;Acc:417591]
18. ARSD ENSGALG00000016648 33 0.958 - - - - - - - 0.958 - - arylsulfatase D, transcript variant X1
19. C5 ENSGALG00000001565 142 0.951 - - - - - - - 0.951 - - complement C5 [Source:HGNC Symbol;Acc:HGNC:1331]
20. P4HB ENSGALG00000038290 286 0.948 - - - - - - - 0.948 - - prolyl 4-hydroxylase subunit beta [Source:NCBI gene;Acc:374091]
21. MIF4GD ENSGALG00000026715 41 0.947 - - - - - - - 0.947 - - MIF4G domain containing [Source:HGNC Symbol;Acc:HGNC:24030]
22. ADAM17 ENSGALG00000016427 49 0.945 - - - - - - - 0.945 - - ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
23. ABCA4 ENSGALG00000005752 15 0.945 - - - - - - - 0.945 - - ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]
24. PAPSS2 ENSGALG00000003689 278 0.944 - - - - - - - 0.944 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2 [Source:HGNC Symbol;Acc:HGNC:8604]
25. TMEM45B ENSGALG00000001203 48 0.943 - - - - - - - 0.943 - - transmembrane protein 45B [Source:HGNC Symbol;Acc:HGNC:25194]
26. AVP ENSGALG00000014117 19 0.942 - - - - - - - 0.942 - - arginine vasopressin [Source:NCBI gene;Acc:396101]
27. FHL1 ENSGALG00000006190 22 0.942 - - - - - - - 0.942 - - four and a half LIM domains 1 [Source:HGNC Symbol;Acc:HGNC:3702]
28. METTL24 ENSGALG00000041120 60 0.942 - - - - - - - 0.942 - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
29. ENSGALG00000026913 ENSGALG00000026913 12 0.942 - - - - - - - 0.942 - -
30. TGM4 ENSGALG00000033171 19 0.942 - - - - - - - 0.942 - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
31. WNT16 ENSGALG00000028069 157 0.94 - - - - - - - 0.940 - - Wnt family member 16 [Source:HGNC Symbol;Acc:HGNC:16267]
32. PLXNC1 ENSGALG00000011309 69 0.938 - - - - - - - 0.938 - - plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
33. CYP3A4 ENSGALG00000004436 75 0.937 - - - - - - - 0.937 - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
34. OSBP ENSGALG00000030548 439 0.936 - - - - - - - 0.936 - - oxysterol binding protein [Source:HGNC Symbol;Acc:HGNC:8503]
35. ENSGALG00000014825 ENSGALG00000014825 491 0.936 - - - - - - - 0.936 - -
36. CHALK5 CHALK5 1351 0.933 - - 0.933 - - - - - - -
37. SOD3 ENSGALG00000018557 16 0.933 - - - - - - - 0.933 - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
38. MRGBP ENSGALG00000005531 79 0.931 - - - - - - - - 0.931 - MRG domain binding protein [Source:HGNC Symbol;Acc:HGNC:15866]
39. ENSGALG00000027352 ENSGALG00000027352 69 0.929 - - - - - - - 0.929 - -
40. GLOD5 ENSGALG00000025991 17 0.928 - - - - - - - 0.928 - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
41. KDM6A ENSGALG00000016217 2302 0.927 - - 0.927 - - - - - - - lysine demethylase 6A, transcript variant X14
42. SELP 28 0.926 - - - - - - - 0.926 - - selectin P, transcript variant X9
43. FBXL18 ENSGALG00000004611 97 0.926 - - - - - - - 0.926 - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
44. BAAT ENSGALG00000040619 579 0.926 - - - - - - - 0.926 - - bile acid-CoA:amino acid N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:932]
45. RAB19 ENSGALG00000012850 155 0.925 - - - - - - - 0.925 - - RAB19, member RAS oncogene family [Source:NCBI gene;Acc:418113]
46. RBBP8NL ENSGALG00000045938 89 0.925 - - - - - - - 0.925 - - RBBP8 N-terminal like [Source:HGNC Symbol;Acc:HGNC:16144]
47. ENSGALG00000016213 ENSGALG00000016213 33 0.922 - - - - - - - 0.922 - -
48. C1QA ENSGALG00000021569 343 0.922 - - - - - - - 0.922 - - complement C1q A chain [Source:HGNC Symbol;Acc:HGNC:1241]
49. UGT8L ENSGALG00000005599 93 0.921 - - - - - - - 0.921 - - UDP glycosyltransferase 8-like
50. PCYT1B 190 0.919 - - 0.919 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
51. GGT7 ENSGALG00000001062 476 0.919 - - 0.919 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
52. DDB1 ENSGALG00000042333 275 0.919 - - - - - - - 0.919 - - damage specific DNA binding protein 1 [Source:NCBI gene;Acc:374050]
53. PC7 PC7 1105 0.919 - - - - - - - 0.919 - -
54. MAT2A ENSGALG00000015366 17 0.918 - - - - - - - 0.918 - - methionine adenosyltransferase 2A, transcript variant X1
55. ZC3HAV1 ENSGALG00000013911 162 0.917 - - - - - - - - 0.917 - zinc finger CCCH-type containing, antiviral 1 [Source:NCBI gene;Acc:426315]
56. ENSGALG00000001886 ENSGALG00000001886 1024 0.914 - - - - - - - 0.914 - -
57. KLHL32 68 0.914 - - - - - - - 0.914 - - kelch like family member 32, transcript variant X3
58. ORC6 ENSGALG00000004342 454 0.912 - - - - - - - 0.912 - - origin recognition complex subunit 6 [Source:NCBI gene;Acc:415749]
59. SNORD38 SNORD38 537 0.911 - - - - - - - - 0.911 -
60. BORA ENSGALG00000016931 3660 0.909 - - 0.909 - - - - - - - bora, aurora kinase A activator [Source:NCBI gene;Acc:769298]
61. TTPAL ENSGALG00000004244 2734 0.909 - - 0.909 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
62. ABCE1 ENSGALG00000009961 958 0.909 - - 0.909 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
63. BBX ENSGALG00000015353 1281 0.908 - - 0.908 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
64. SMOC2 ENSGALG00000011205 340 0.907 - - 0.907 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
65. TCTN2 ENSGALG00000023683 3596 0.907 - - 0.907 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
66. SEPHS1 ENSGALG00000014575 10701 0.905 - - 0.905 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
67. POLR1A ENSGALG00000038160 236 0.905 - - - - - - - 0.905 - - RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]
68. TRIM13 ENSGALG00000017011 92 0.904 - - 0.904 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
69. TUBA4A ENSGALG00000000433 1367 0.904 - - 0.904 - - - - - - - tubulin alpha 4a
70. PRUNE PRUNE 452 0.903 - - 0.903 - - - - - - -
71. C12ORF32 C12ORF32 768 0.902 - - - - - - - 0.902 - -
72. SLC41A1 ENSGALG00000000721 1604 0.901 - - 0.901 - - - - - - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
73. ZNF639 ENSGALG00000005944 6387 0.901 - - 0.901 - - - - - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
74. NGF ENSGALG00000002556 122 0.901 - - 0.901 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
75. RBBP8 ENSGALG00000014982 3255 0.901 - - 0.901 - - - - - - - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
76. L3MBTL3 ENSGALG00000034030 113 0.9 - - 0.900 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
77. SZT2 ENSGALG00000028561 255 0.9 - - 0.900 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
78. LOX ENSGALG00000028063 1488 0.899 - - - - - - - 0.899 - - lysyl oxidase [Source:NCBI gene;Acc:396474]
79. PCDH17 ENSGALG00000016941 1006 0.899 - - 0.899 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
80. ENSGALG00000021106 ENSGALG00000021106 35 0.899 - - - - - - - 0.899 - -
81. NUDT13 ENSGALG00000004319 341 0.899 - - - - - - - 0.899 - - nudix hydrolase 13 [Source:HGNC Symbol;Acc:HGNC:18827]
82. IFT88 1241 0.899 - - - - - - - 0.899 - - intraflagellar transport 88, transcript variant X3
83. ADK ENSGALG00000005057 199 0.898 - - 0.898 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
84. TIAR TIAR 2471 0.898 - - 0.898 - - - - - - -
85. LBR 6686 0.898 - - 0.898 - - - - - - - lamin B receptor, transcript variant X4
86. CHRNA6 ENSGALG00000015382 31 0.897 - - - - - - - 0.897 - - cholinergic receptor nicotinic alpha 6 subunit [Source:NCBI gene;Acc:396321]
87. RPS6KB1 ENSGALG00000005198 169 0.897 - - 0.897 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
88. GCC2 ENSGALG00000016806 1085 0.897 - - 0.897 - - - - - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
89. UEVLD ENSGALG00000006342 164 0.897 - - 0.897 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
90. ITM2B ENSGALG00000016996 1112 0.897 - - 0.897 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
91. SNN ENSGALG00000028876 1687 0.896 - - 0.896 - - - - - - - stannin [Source:NCBI gene;Acc:416429]
92. ES1ML2 ENSGALG00000007526 179 0.896 - - - - - - - 0.896 - - ES1 protein homolog, mitochondrial-like 2
93. CLEC16A ENSGALG00000007167 66 0.895 - - 0.895 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
94. MRC2 ENSGALG00000000461 48 0.895 - - 0.895 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
95. CDC14B ENSGALG00000012627 110 0.895 - - 0.895 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
96. NXPE3 ENSGALG00000015344 111 0.895 - - 0.895 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
97. ENSGALG00000028964 ENSGALG00000028964 46 0.895 - - 0.895 - - - - - - -
98. TDRD6 48 0.895 - - 0.895 - - - - - - - tudor domain containing 6
99. RQCD1 RQCD1 110 0.895 - - 0.895 - - - - - - -
100. BTG1L ENSGALG00000004676 2293 0.895 - - 0.895 - - - - - - - protein BTG1-like

There are 700 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA