Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRMU

Gene Name Gene ID Reads Annotation
TRMU ENSGALG00000031922 1849 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Source:NCBI gene;Acc:425909]











Genes with expression patterns similar to TRMU

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRMU ENSGALG00000031922 1849 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Source:NCBI gene;Acc:425909]
2. FADS1 ENSGALG00000007127 5231 0.834 - - - - - - 0.834 - - - fatty acid desaturase 1
3. PARPBP ENSGALG00000012756 1895 0.831 - - - - - - 0.831 - - - PARP1 binding protein [Source:NCBI gene;Acc:418092]
4. CLTCL1 ENSGALG00000041760 9351 0.803 - - - - - - 0.803 - - - clathrin, heavy chain-like 1, transcript variant X6
5. BAG5 ENSGALG00000031062 4498 0.8 - - - - - - 0.800 - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
6. PSAT1 ENSGALG00000015180 4752 0.795 - - - - - - 0.795 - - - phosphoserine aminotransferase 1 [Source:HGNC Symbol;Acc:HGNC:19129]
7. KDM1A ENSGALG00000033469 20632 0.795 - - - - - - - 0.795 - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
8. SENP6 ENSGALG00000015901 8013 0.792 - - - - - - 0.792 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
9. IARS ENSGALG00000004813 12936 0.786 - - - - - - 0.786 - - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
10. TMEM185A ENSGALG00000009139 4424 0.78 - - - - - - 0.780 - - - transmembrane protein 185A [Source:HGNC Symbol;Acc:HGNC:17125]
11. COMMD4 ENSGALG00000001572 31664 0.778 - - - - - - 0.778 - - - COMM domain containing 4 [Source:NCBI gene;Acc:770048]
12. CYB5A ENSGALG00000013708 8287 0.778 - - - - - - 0.778 - - - cytochrome b5 type A [Source:NCBI gene;Acc:414798]
13. PGGT1B ENSGALG00000008197 1881 0.777 - - - - - - 0.777 - - - protein geranylgeranyltransferase type I subunit beta [Source:HGNC Symbol;Acc:HGNC:8895]
14. GATAD1 ENSGALG00000009399 4067 0.776 - - - - - - 0.776 - - - GATA zinc finger domain containing 1 [Source:NCBI gene;Acc:420551]
15. ANAPC7 ENSGALG00000003826 5484 0.776 - - - - - - 0.776 - - - anaphase promoting complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:17380]
16. PDCD6 ENSGALG00000013400 7611 0.773 - - - - - - 0.773 - - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
17. RAB24 ENSGALG00000002984 6264 0.772 - - - - - - 0.772 - - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
18. SUDS3 ENSGALG00000007393 8322 0.771 - - - - - - 0.771 - - - SDS3 homolog, SIN3A corepressor complex component [Source:NCBI gene;Acc:427713]
19. MRPS31 ENSGALG00000017033 9287 0.77 - - - - - - 0.770 - - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
20. ATG12 ENSGALG00000002345 3607 0.769 - - - - - - 0.769 - - - autophagy related 12 [Source:HGNC Symbol;Acc:HGNC:588]
21. DEGS1 ENSGALG00000009330 3599 0.767 - - - - - - 0.767 - - - delta 4-desaturase, sphingolipid 1 [Source:NCBI gene;Acc:421327]
22. PJA2 ENSGALG00000000264 1574 0.766 - - - - - - 0.766 - - - praja ring finger ubiquitin ligase 2, transcript variant X1
23. LOC415664 ENSGALG00000001791 2688 0.764 - - - - - - 0.764 - - - uncharacterized oxidoreductase-like, transcript variant X1
24. TSR1 7656 0.762 - - - - - - - 0.762 - - TSR1, ribosome maturation factor
25. STIL ENSGALG00000010478 1398 0.761 - - - - - - 0.761 - - - STIL, centriolar assembly protein [Source:HGNC Symbol;Acc:HGNC:10879]
26. UQCRH ENSGALG00000017380 55734 0.761 - - - - - - 0.761 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
27. ILKAP ENSGALG00000006253 7388 0.757 - - - - - - 0.757 - - - ILK associated serine/threonine phosphatase [Source:HGNC Symbol;Acc:HGNC:15566]
28. RNFT1 ENSGALG00000005205 2888 0.757 - - - - - - 0.757 - - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
29. ATG5 ENSGALG00000015387 7752 0.754 - - - - - - 0.754 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
30. C20H20ORF111 C20H20ORF111 4029 0.754 - - - - - - 0.754 - - -
31. NDST2 ENSGALG00000005107 4224 0.752 - - - - - - 0.752 - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
32. SNAP47 ENSGALG00000005412 1487 0.752 - - - - - - 0.752 - - - synaptosome associated protein 47 [Source:HGNC Symbol;Acc:HGNC:30669]
33. MED28 ENSGALG00000007138 7686 0.752 - - - - - - 0.752 - - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
34. GABPB1 ENSGALG00000023440 5676 0.75 - - - - - - 0.750 - - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
35. GLI2 ENSGALG00000011630 3347 0.747 - - - - - - 0.747 - - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
36. LY6E ENSGALG00000041621 16227 0.746 - - - - - - 0.746 - - - lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
37. ATP5L ENSGALG00000006899 69561 0.746 - - - - - - 0.746 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit G
38. CSRP2BP CSRP2BP 4679 0.745 - - - - - - 0.745 - - -
39. GLIPR2 ENSGALG00000028821 5791 0.745 - - - - - - 0.745 - - - GLI pathogenesis related 2, transcript variant X2
40. THAP5 ENSGALG00000009494 6540 0.743 - - - - - - 0.743 - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
41. TULP3 ENSGALG00000013424 2064 0.741 - - - - - - 0.741 - - - tubby like protein 3 [Source:HGNC Symbol;Acc:HGNC:12425]
42. ATAD2B ENSGALG00000037872 2526 0.741 - - - - - - 0.741 - - - ATPase family, AAA domain containing 2B [Source:HGNC Symbol;Acc:HGNC:29230]
43. LSM6 ENSGALG00000009985 18582 0.741 - - - - - - 0.741 - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
44. EMC8 ENSGALG00000005744 9422 0.74 - - - - - - 0.740 - - - ER membrane protein complex subunit 8
45. ANKRA2 ENSGALG00000013511 3460 0.74 - - - - - - 0.740 - - - ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
46. SAP130 ENSGALG00000002070 9814 0.739 - - - - - - 0.739 - - - Sin3A associated protein 130 [Source:NCBI gene;Acc:424756]
47. TRMT44 ENSGALG00000015594 1490 0.738 - - - - - - 0.738 - - - tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
48. BRP44L BRP44L 30452 0.738 - - - - - - 0.738 - - -
49. LGALS1 ENSGALG00000012420 13993 0.738 - - - - - - 0.738 - - - galectin 1 [Source:NCBI gene;Acc:396491]
50. NEDD1 ENSGALG00000031699 3634 0.737 - - - - - - 0.737 - - - neural precursor cell expressed, developmentally down-regulated 1 [Source:NCBI gene;Acc:417922]
51. C6orf211 C6orf211 2644 0.736 - - - - - - 0.736 - - -
52. ERGIC2 ENSGALG00000007183 12870 0.736 - - - - - - 0.736 - - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
53. UQCC UQCC 5913 0.736 - - - - - - 0.736 - - -
54. TRANK1 ENSGALG00000037629 2268 0.736 - - - - - - 0.736 - - - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
55. RPB6 RPB6 9517 0.736 - - - - - - 0.736 - - -
56. RFWD3 2315 0.735 - - - - - - 0.735 - - - ring finger and WD repeat domain 3
57. TAF1A ENSGALG00000009441 2431 0.734 - - - - - - 0.734 - - - TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
58. MTIF3 ENSGALG00000017097 2524 0.734 - - - - - - 0.734 - - - mitochondrial translational initiation factor 3 [Source:NCBI gene;Acc:418930]
59. ACSF2 ENSGALG00000019768 2727 0.734 - - - - - - - - 0.734 - acyl-CoA synthetase family member 2 [Source:HGNC Symbol;Acc:HGNC:26101]
60. RRP7A ENSGALG00000011866 7718 0.734 - - - - - - 0.734 - - - ribosomal RNA processing 7 homolog A [Source:NCBI gene;Acc:417975]
61. ATAD5 ENSGALG00000003294 4830 0.732 - - - - - - 0.732 - - - ATPase family, AAA domain containing 5 [Source:NCBI gene;Acc:417408]
62. NUP85 ENSGALG00000007974 21249 0.732 - - - - - - 0.732 - - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
63. USP45 ENSGALG00000015478 3101 0.73 - - - - - - 0.730 - - - ubiquitin specific peptidase 45 [Source:NCBI gene;Acc:421793]
64. CHMP6 ENSGALG00000026428 18026 0.73 - - - - - - 0.730 - - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
65. CDK5RAP1 ENSGALG00000006738 2628 0.729 - - - - - - 0.729 - - - CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]
66. MLX ENSGALG00000003199 5286 0.729 - - - - - - 0.729 - - - MLX, MAX dimerization protein [Source:NCBI gene;Acc:420026]
67. CDCA7 ENSGALG00000040833 7484 0.729 - - - - - - 0.729 - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
68. ZC3H3 ENSGALG00000043265 1638 0.729 - - - - - - 0.729 - - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
69. ASPG ENSGALG00000011572 4984 0.728 - - - - - - 0.728 - - - asparaginase [Source:HGNC Symbol;Acc:HGNC:20123]
70. C10ORF58 C10ORF58 5045 0.728 - - - - - - 0.728 - - -
71. RBBP8 ENSGALG00000014982 3255 0.727 - - - - - - 0.727 - - - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
72. EBNA1BP2 ENSGALG00000009045 17453 0.727 - - - - - - 0.727 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
73. MCPH1 ENSGALG00000016332 2097 0.725 - - - - - - 0.725 - - - microcephalin 1 [Source:NCBI gene;Acc:100125976]
74. ZC3H13 ENSGALG00000016984 21043 0.725 - - - - - - 0.725 - - - zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:HGNC:20368]
75. USP14 ENSGALG00000014920 18778 0.725 - - - - - - 0.725 - - - ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]
76. UBQLN4 ENSGALG00000042214 15829 0.725 - - - - - - 0.725 - - - ubiquilin 4 [Source:NCBI gene;Acc:426353]
77. UBOX5 ENSGALG00000035134 1705 0.723 - - - - - - 0.723 - - - U-box domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17777]
78. CCNDBP1 ENSGALG00000004837 11520 0.723 - - - - - - 0.723 - - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
79. FAM210A ENSGALG00000013887 1828 0.722 - - - - - - 0.722 - - - family with sequence similarity 210 member A [Source:NCBI gene;Acc:421045]
80. GLB1L2 ENSGALG00000001604 4057 0.722 - - - - - - 0.722 - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
81. JAM3 ENSGALG00000001472 13162 0.721 - - - - - - 0.721 - - - junctional adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:15532]
82. MTO1 ENSGALG00000015923 4418 0.721 - - - - - - 0.721 - - - mitochondrial tRNA translation optimization 1 [Source:NCBI gene;Acc:772297]
83. TSPAN5 ENSGALG00000012227 8703 0.721 - - - - - - 0.721 - - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
84. TMOD3 ENSGALG00000004710 2820 0.72 - - - - - - 0.720 - - - tropomodulin 3 [Source:NCBI gene;Acc:415421]
85. NDUFS1 ENSGALG00000008606 7898 0.72 - - - - - - 0.720 - - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:NCBI gene;Acc:424102]
86. INCENP ENSGALG00000007537 16617 0.718 - - - - - - - 0.718 - - inner centromere protein [Source:NCBI gene;Acc:396270]
87. RPS17 ENSGALG00000002157 142120 0.718 - - - - - - 0.718 - - - ribosomal protein S17 [Source:NCBI gene;Acc:374053]
88. PPM1B ENSGALG00000030691 4513 0.717 - - - - - - 0.717 - - - protein phosphatase, Mg2+/Mn2+ dependent 1B [Source:NCBI gene;Acc:421404]
89. PLAA ENSGALG00000001782 5459 0.716 - - - - - - 0.716 - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
90. AP3M2 ENSGALG00000038155 3372 0.716 - - - - - - 0.716 - - - adaptor related protein complex 3 subunit mu 2 [Source:HGNC Symbol;Acc:HGNC:570]
91. RYBP ENSGALG00000033025 3019 0.716 - - - - - - 0.716 - - - RING1 and YY1 binding protein
92. PYURF ENSGALG00000039869 5657 0.715 - - - - - - 0.715 - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
93. RMND5A ENSGALG00000015815 2903 0.714 - - - - - - 0.714 - - - required for meiotic nuclear division 5 homolog A [Source:NCBI gene;Acc:422920]
94. CHP1 ENSGALG00000008569 6876 0.714 - - - - - - 0.714 - - - calcineurin like EF-hand protein 1 [Source:NCBI gene;Acc:423211]
95. RCOR3 ENSGALG00000009871 7022 0.714 - - - - - - 0.714 - - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
96. SGOL1 SGOL1 3919 0.714 - - - - - - 0.714 - - -
97. PTK2 ENSGALG00000031741 13103 0.714 - - - - - - 0.714 - - - protein tyrosine kinase 2 [Source:NCBI gene;Acc:396416]
98. ENSGALG00000027884 ENSGALG00000027884 20249 0.714 - - - - - - 0.714 - - -
99. TTC13 ENSGALG00000032780 995 0.713 - - - - - - 0.713 - - - tetratricopeptide repeat domain 13 [Source:HGNC Symbol;Acc:HGNC:26204]
100. FBXO5 ENSGALG00000013607 6156 0.712 - - - - - - 0.712 - - - F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]

There are 37 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA