Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRIP11

Gene Name Gene ID Reads Annotation
TRIP11 ENSGALG00000010763 3146 thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]











Genes with expression patterns similar to TRIP11

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRIP11 ENSGALG00000010763 3146 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
2. XPC ENSGALG00000006357 2484 2.439 - - 0.812 - - - 0.894 - 0.733 - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
3. VWF ENSGALG00000017272 1012 1.794 - - - - - - - 0.934 0.860 - Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
4. PEX3 ENSGALG00000013777 3158 1.737 - - - - - - 0.897 - 0.840 - peroxisomal biogenesis factor 3
5. PTCHD1 ENSGALG00000016358 3882 1.707 - - 0.789 - - - 0.918 - - - patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]
6. ZYG11B ENSGALG00000010643 2555 1.701 - - - - - - 0.857 0.844 - - zyg-11 family member B, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:25820]
7. BYSL ENSGALG00000003467 7555 1.688 - - - - - - 0.901 - 0.787 - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
8. RUFY2 1442 1.687 - - 0.839 - - - - - 0.848 - RUN and FYVE domain containing 2, transcript variant X1
9. DHCR7 ENSGALG00000004106 4731 1.663 - - 0.783 - - - 0.880 - - - 7-dehydrocholesterol reductase [Source:NCBI gene;Acc:422982]
10. TSEN2 ENSGALG00000004981 1929 1.646 - - 0.860 - - - - - 0.786 - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
11. RHPN2 ENSGALG00000004814 1865 1.644 - - - - - - - 0.904 0.740 - rhophilin Rho GTPase binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19974]
12. TMEM128 ENSGALG00000014992 6567 1.643 - - 0.792 - - - 0.851 - - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
13. DDX18 ENSGALG00000012147 12463 1.643 - - 0.835 - - - - - 0.808 - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
14. WDR36 ENSGALG00000000247 11277 1.635 - - - - - - 0.823 - 0.812 - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
15. CHCHD6 ENSGALG00000006056 6121 1.628 - - 0.742 - - - - 0.886 - - coiled-coil-helix-coiled-coil-helix domain containing 6 [Source:HGNC Symbol;Acc:HGNC:28184]
16. LAMB1 ENSGALG00000007905 7737 1.626 - - - - - - - 0.912 0.714 - laminin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6486]
17. JUP ENSGALG00000017414 6920 1.625 - - - - - - 0.900 0.725 - - junction plakoglobin [Source:NCBI gene;Acc:429710]
18. ACTL6A ENSGALG00000009061 13013 1.612 - - 0.733 - - - 0.879 - - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
19. PIH1D3 ENSGALG00000004870 1365 1.608 - - 0.833 - - - - - 0.775 - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
20. SRP14 ENSGALG00000009592 17828 1.584 - - 0.715 - - - 0.869 - - - signal recognition particle 14 [Source:NCBI gene;Acc:423284]
21. MESDC2 MESDC2 11010 1.582 - - - - - - 0.736 0.846 - -
22. KLHL15 ENSGALG00000016345 1638 1.557 - - 0.794 - - - - - 0.763 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
23. NAA50 ENSGALG00000033889 3551 1.535 - - 0.782 - - 0.753 - - - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
24. LRR1 ENSGALG00000012230 1062 1.532 - - 0.793 - - - - - 0.739 - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
25. PCBP4 ENSGALG00000027695 7937 1.508 - - 0.772 - - - 0.736 - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
26. INVS ENSGALG00000013441 1123 1.495 - - 0.703 - - - - - 0.792 - inversin [Source:NCBI gene;Acc:395234]
27. TBPL1 ENSGALG00000013981 3710 1.491 - - 0.774 - - - - - 0.717 - TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
28. FAM49A ENSGALG00000016463 6345 1.488 - - - - - - 0.715 0.773 - - family with sequence similarity 49 member A [Source:NCBI gene;Acc:421949]
29. RRP1B ENSGALG00000035696 12309 1.419 - - 0.711 - - - - - 0.708 - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
30. LGR5 ENSGALG00000010163 2931 0.985 - - - - - - 0.985 - - - leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
31. SLC4A3 ENSGALG00000011224 2161 0.979 - - - - - - 0.979 - - - solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]
32. SKIV2L2 ENSGALG00000014709 2926 0.974 - - - - - - 0.974 - - - Ski2 like RNA helicase 2 [Source:NCBI gene;Acc:427137]
33. NECAP2 ENSGALG00000003745 4899 0.973 - - - - - - 0.973 - - - NECAP endocytosis associated 2 [Source:NCBI gene;Acc:419464]
34. NUDT4 ENSGALG00000011285 2998 0.972 - - - - - - - 0.972 - - nudix hydrolase 4, transcript variant X5
35. MPHOSPH10 ENSGALG00000003906 7029 0.971 - - - - - - 0.971 - - - M-phase phosphoprotein 10 [Source:HGNC Symbol;Acc:HGNC:7213]
36. FAF1 ENSGALG00000010536 1522 0.971 - - - - - - - 0.971 - - Fas associated factor 1 [Source:HGNC Symbol;Acc:HGNC:3578]
37. RPS6KA RPS6KA 6745 0.97 - - - - - - - 0.970 - -
38. PARPBP ENSGALG00000012756 1895 0.97 - - - - - - - 0.970 - - PARP1 binding protein [Source:NCBI gene;Acc:418092]
39. IAH1 ENSGALG00000016425 11163 0.969 - - - - - - 0.969 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:NCBI gene;Acc:421930]
40. MICU1 ENSGALG00000004372 1978 0.968 - - - - - - - 0.968 - - mitochondrial calcium uptake 1 [Source:HGNC Symbol;Acc:HGNC:1530]
41. MST4 MST4 1931 0.968 - - - - - - - 0.968 - -
42. POLD3 ENSGALG00000017307 2136 0.967 - - - - - - - 0.967 - - DNA polymerase delta 3, accessory subunit [Source:NCBI gene;Acc:419053]
43. CMTM7 ENSGALG00000011488 1406 0.966 - - - - - - - 0.966 - - CKLF like MARVEL transmembrane domain containing 7 [Source:NCBI gene;Acc:420666]
44. ZNF652 ENSGALG00000001279 1188 0.966 - - - - - - - 0.966 - - zinc finger protein 652 [Source:HGNC Symbol;Acc:HGNC:29147]
45. CLCN7 ENSGALG00000030826 3173 0.965 - - - - - - - 0.965 - - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
46. FER1L6 ENSGALG00000033783 196 0.965 - - - - - - - 0.965 - - fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
47. LGALS1_1 ENSGALG00000012420 1560 0.965 - - - - - - - 0.965 - - galectin 1 [Source:NCBI gene;Acc:396491]
48. GNPAT ENSGALG00000011163 4286 0.964 - - - - - - - 0.964 - - glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]
49. DCUN1D2 ENSGALG00000029145 2414 0.964 - - - - - - - 0.964 - - defective in cullin neddylation 1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20328]
50. WDYHV1 ENSGALG00000030059 2961 0.964 - - - - - - - 0.964 - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
51. SUV420H1 SUV420H1 2361 0.964 - - - - - - - 0.964 - -
52. SURF1 ENSGALG00000033754 2130 0.963 - - - - - - - 0.963 - - SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]
53. KIF25 ENSGALG00000011299 2601 0.963 - - - - - - - 0.963 - - kinesin family member 25 [Source:HGNC Symbol;Acc:HGNC:6390]
54. SNTB1 ENSGALG00000034528 3907 0.963 - - - - - - - 0.963 - - syntrophin beta 1 [Source:NCBI gene;Acc:404774]
55. ZBTB24 ENSGALG00000015231 1384 0.962 - - - - - - - 0.962 - - zinc finger and BTB domain containing 24 [Source:HGNC Symbol;Acc:HGNC:21143]
56. MACF1 ENSGALG00000003693 1043 0.962 - - - - - - - 0.962 - - microtubule-actin crosslinking factor 1 [Source:HGNC Symbol;Acc:HGNC:13664]
57. ATG2B ENSGALG00000042088 918 0.962 - - - - - - - 0.962 - - autophagy related 2B [Source:HGNC Symbol;Acc:HGNC:20187]
58. DAB1 ENSGALG00000010857 1085 0.962 - - - - - - - 0.962 - - DAB1, reelin adaptor protein [Source:NCBI gene;Acc:374083]
59. ZNF142 ENSGALG00000011393 2078 0.961 - - - - - - - 0.961 - - zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
60. CHTF18 ENSGALG00000040157 2140 0.961 - - - - - - - 0.961 - - chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:416531]
61. OFD1 ENSGALG00000016576 1916 0.961 - - - - - - - 0.961 - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
62. NF1 ENSGALG00000005660 1610 0.96 - - - - - - - 0.960 - - neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]
63. STAU2 ENSGALG00000031390 2008 0.96 - - - - - - - 0.960 - - staufen double-stranded RNA binding protein 2 [Source:NCBI gene;Acc:420184]
64. LSMD1 LSMD1 2562 0.96 - - - - - - - 0.960 - -
65. SMPD2 ENSGALG00000033245 462 0.959 - - - - - - - 0.959 - - sphingomyelin phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:11121]
66. MCAT ENSGALG00000034275 4598 0.958 - - - - - - - 0.958 - - malonyl-CoA-acyl carrier protein transacylase [Source:HGNC Symbol;Acc:HGNC:29622]
67. CLUAP1 ENSGALG00000030877 4269 0.958 - - - - - - - 0.958 - - clusterin associated protein 1 [Source:NCBI gene;Acc:426077]
68. CUL5 ENSGALG00000017165 2480 0.957 - - - - - - - 0.957 - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
69. NAPEPLD ENSGALG00000008285 1295 0.957 - - - - - - - 0.957 - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
70. OSR1 ENSGALG00000016473 1202 0.957 - - - - - - - 0.957 - - odd-skipped related transciption factor 1 [Source:HGNC Symbol;Acc:HGNC:8111]
71. KIAA1239 KIAA1239 263 0.956 - - - - - - - 0.956 - -
72. MED12L ENSGALG00000010370 765 0.956 - - - - - - - 0.956 - - mediator complex subunit 12 like [Source:HGNC Symbol;Acc:HGNC:16050]
73. ENSGALG00000009863 ENSGALG00000009863 7375 0.955 - - - - - - - 0.955 - -
74. SLC16A9 ENSGALG00000003172 266 0.955 - - - - - - - 0.955 - - solute carrier family 16 member 9 [Source:NCBI gene;Acc:423667]
75. FAM92A1 FAM92A1 511 0.955 - - - - - - - 0.955 - -
76. HNMT ENSGALG00000012377 227 0.955 - - - - - - - 0.955 - - histamine N-methyltransferase [Source:NCBI gene;Acc:424298]
77. ARHGAP12 ENSGALG00000007254 479 0.955 - - - - - - - 0.955 - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
78. USP12P1 USP12P1 4193 0.955 - - - - - - - 0.955 - -
79. STX16 ENSGALG00000007541 6458 0.955 - - - - - - - 0.955 - - syntaxin 16 [Source:NCBI gene;Acc:419315]
80. SMPDL3B ENSGALG00000000737 223 0.955 - - - - - - - 0.955 - - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
81. ENSGALG00000003847 ENSGALG00000003847 1220 0.954 - - - - - - - 0.954 - -
82. ZBTB18 ENSGALG00000010705 3433 0.954 - - - - - - 0.954 - - - zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
83. PIBPPDD4L ENSGALG00000003345 1689 0.954 - - - - - - - 0.954 - - 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4-like
84. DMTF1 ENSGALG00000030844 3584 0.954 - - - - - - - 0.954 - - cyclin D binding myb like transcription factor 1 [Source:NCBI gene;Acc:418646]
85. ABCE1 ENSGALG00000009961 958 0.954 - - - - - - - 0.954 - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
86. TMEM33 ENSGALG00000014248 6069 0.953 - - - - - - - 0.953 - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
87. KAT6B ENSGALG00000005035 301 0.953 - - - - - - - 0.953 - - lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
88. TRAFD1 ENSGALG00000043208 1009 0.953 - - - - - - - 0.953 - - TRAF-type zinc finger domain containing 1 [Source:NCBI gene;Acc:416884]
89. PRKAB2 ENSGALG00000001678 1999 0.951 - - - - - - - 0.951 - - protein kinase AMP-activated non-catalytic subunit beta 2 [Source:NCBI gene;Acc:427017]
90. SUN1 ENSGALG00000003781 3442 0.951 - - - - - - - 0.951 - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
91. ENSGALG00000017324 ENSGALG00000017324 8235 0.949 - - - - - - - 0.949 - -
92. ANO6 ENSGALG00000009638 470 0.947 - - - - - - - 0.947 - - anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
93. PLA2G12A ENSGALG00000012185 5261 0.947 - - - - - - - 0.947 - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
94. TAF1B ENSGALG00000016437 2318 0.947 - - - - - - - 0.947 - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
95. NCBP2_1 ENSGALG00000006843 7170 0.945 - - - - - - 0.945 - - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
96. MKP3 MKP3 4418 0.944 - - - - - - - 0.944 - -
97. GTF2H4 GTF2H4 5227 0.944 - - - - - - - 0.944 - -
98. MKI67 ENSGALG00000025996 28136 0.942 - - - - - - 0.942 - - - marker of proliferation Ki-67, transcript variant X3
99. AIMP1 ENSGALG00000010553 17994 0.941 - - - - - - 0.941 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
100. FBXW5 ENSGALG00000030831 5927 0.94 - - - - - - - 0.940 - - F-box and WD repeat domain containing 5 [Source:NCBI gene;Acc:417289]

There are 698 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA