Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRIO

Gene Name Gene ID Reads Annotation
TRIO ENSGALG00000031495 233 trio Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:12303]











Genes with expression patterns similar to TRIO

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRIO ENSGALG00000031495 233 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 trio Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:12303]
2. BMPR1A ENSGALG00000002003 20 1 - - - - - - 1.000 - - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
3. CALR3 ENSGALG00000003914 8 1 - - - - - - 1.000 - - - calreticulin 3 [Source:HGNC Symbol;Acc:HGNC:20407]
4. FAM96A ENSGALG00000026448 41 1 - - - - - - 1.000 - - - family with sequence similarity 96 member A [Source:NCBI gene;Acc:415571]
5. IL18RAP ENSGALG00000016788 1 1 - - - - - - 1.000 - - - interleukin 18 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5989]
6. WDR52 WDR52 37 1 - - - - - - 1.000 - - -
7. P4HTM ENSGALG00000006937 33 1 - - - - - - 1.000 - - - prolyl 4-hydroxylase, transmembrane [Source:HGNC Symbol;Acc:HGNC:28858]
8. MGAT3 ENSGALG00000036743 5 1 - - - - - - 1.000 - - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
9. THRB ENSGALG00000011294 7 1 - - - - - - 1.000 - - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
10. FBXL16 ENSGALG00000002443 11 1 - - - - - - 1.000 - - - F-box and leucine rich repeat protein 16 [Source:NCBI gene;Acc:416405]
11. ACSS1L ENSGALG00000010225 5 1 - - - - - - 1.000 - - - acyl-CoA synthetase short-chain family member 1-like, transcript variant X3
12. LOC423752 ENSGALG00000020899 17 1 - - - - - - 1.000 - - - uncharacterized LOC423752, transcript variant X1
13. FAM184B ENSGALG00000041854 43 1 - - - - - - 1.000 - - - family with sequence similarity 184 member B [Source:HGNC Symbol;Acc:HGNC:29235]
14. MED13L ENSGALG00000008238 27 1 - - - - - - 1.000 - - - mediator complex subunit 13 like [Source:HGNC Symbol;Acc:HGNC:22962]
15. ENSGALG00000005511 ENSGALG00000005511 7 1 - - - - - - 1.000 - - -
16. PAH ENSGALG00000012754 15 1 - - - - - - 1.000 - - - phenylalanine hydroxylase [Source:NCBI gene;Acc:408024]
17. DAAM1 ENSGALG00000012017 81 1 - - - - - - 1.000 - - - Gallus gallus dishevelled associated activator of morphogenesis 1 (DAAM1), mRNA. [Source:RefSeq mRNA;Acc:NM_001322368]
18. PCGF3 ENSGALG00000015333 7 1 - - - - - - 1.000 - - - polycomb group ring finger 3 [Source:HGNC Symbol;Acc:HGNC:10066]
19. SLC22A16 ENSGALG00000015055 21 1 - - - - - - 1.000 - - - solute carrier family 22 member 16 [Source:HGNC Symbol;Acc:HGNC:20302]
20. CCDC73 ENSGALG00000012103 17 1 - - - - - - 1.000 - - - coiled-coil domain containing 73 [Source:HGNC Symbol;Acc:HGNC:23261]
21. CRK ENSGALG00000002656 15 1 - - - - - - 1.000 - - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
22. VWA5A ENSGALG00000028815 19 1 - - - - - - 1.000 - - - von Willebrand factor A domain containing 5A, transcript variant X5
23. EML5 ENSGALG00000010639 25 1 - - - - - - 1.000 - - - echinoderm microtubule associated protein like 5, transcript variant X1
24. TAF5L ENSGALG00000011098 17 1 - - - - - - 1.000 - - - TATA-box binding protein associated factor 5 like [Source:HGNC Symbol;Acc:HGNC:17304]
25. SPG20 22 1 - - - - - - 1.000 - - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
26. GABRA5 ENSGALG00000016744 12 1 - - - - - - 1.000 - - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
27. CDK19 ENSGALG00000015051 26 1 - - - - - - 1.000 - - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
28. FIP1L1 ENSGALG00000013943 15 1 - - - - - - 1.000 - - - factor interacting with PAPOLA and CPSF1, transcript variant X5
29. GALNT9 ENSGALG00000002242 219 1 - - - - - - 1.000 - - - polypeptide N-acetylgalactosaminyltransferase 9 [Source:HGNC Symbol;Acc:HGNC:4131]
30. MIER2 ENSGALG00000001108 25 1 - - - - - - 1.000 - - - MIER family member 2 [Source:HGNC Symbol;Acc:HGNC:29210]
31. PGF ENSGALG00000026557 33 0.909 - - - - - - 0.909 - - - placental growth factor [Source:HGNC Symbol;Acc:HGNC:8893]
32. MYT1L ENSGALG00000016384 147 0.895 - - - - - - 0.895 - - - myelin transcription factor 1 like [Source:HGNC Symbol;Acc:HGNC:7623]
33. CDERMO-1 CDERMO-1 279 0.88 - - - - - - 0.880 - - -
34. SVCT2 SVCT2 400 0.857 - - - - - - - - - 0.857
35. MSANTD3 ENSGALG00000013403 85 0.834 - - - - - - 0.834 - - - Myb/SANT DNA binding domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23370]
36. RAMP3 ENSGALG00000037246 1187 0.832 - - - - - - - - - 0.832 receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
37. NEIL3 ENSGALG00000010719 47 0.829 - - - - - - 0.829 - - - nei like DNA glycosylase 3 [Source:HGNC Symbol;Acc:HGNC:24573]
38. ELOVL3 ENSGALG00000025772 212 0.829 - - - - - - 0.829 - - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
39. CCDC83 ENSGALG00000013247 61 0.825 - - - - - - 0.825 - - - coiled-coil domain containing 83 [Source:HGNC Symbol;Acc:HGNC:28535]
40. EML4 ENSGALG00000009915 628 0.82 - - - - - - 0.820 - - - echinoderm microtubule associated protein like 4 [Source:HGNC Symbol;Acc:HGNC:1316]
41. HELQ ENSGALG00000011208 159 0.808 - - - - - - - - - 0.808 helicase, POLQ-like, transcript variant X1
42. USP24 ENSGALG00000010805 576 0.803 - - - - - - - 0.803 - - ubiquitin specific peptidase 24 [Source:HGNC Symbol;Acc:HGNC:12623]
43. TOX3 ENSGALG00000034649 54 0.796 - - - - - - 0.796 - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
44. CRYBB1 ENSGALG00000005630 11 0.796 - - - - - - 0.796 - - - crystallin beta B1 [Source:NCBI gene;Acc:374000]
45. TMEM230 ENSGALG00000036876 55 0.794 - - - - - - 0.794 - - - transmembrane protein 230 [Source:NCBI gene;Acc:419518]
46. CADPS2 ENSGALG00000008926 398 0.776 - - - - - - - 0.776 - - calcium dependent secretion activator 2 [Source:HGNC Symbol;Acc:HGNC:16018]
47. KCNIP4 ENSGALG00000034621 775 0.775 - - - - - - - - - 0.775 potassium voltage-gated channel interacting protein 4 [Source:NCBI gene;Acc:395239]
48. ZNFX1 ENSGALG00000004859 33 0.764 - - - - - - 0.764 - - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
49. BRAT1 ENSGALG00000004348 158 0.753 - - - - - - 0.753 - - - BRCA1 associated ATM activator 1, transcript variant X3
50. MTMR12 ENSGALG00000003168 1130 0.746 - - - - - - - - - 0.746 myotubularin related protein 12 [Source:HGNC Symbol;Acc:HGNC:18191]
51. SLCO2A1 ENSGALG00000006471 18 0.745 - - - - 0.745 - - - - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
52. LRRIQ1 147 0.742 - - - - - - - - - 0.742 leucine rich repeats and IQ motif containing 1, transcript variant X2
53. CALB2 ENSGALG00000026903 32 0.742 - - - - - - 0.742 - - - calbindin 2 [Source:NCBI gene;Acc:396255]
54. SLCO5A1 ENSGALG00000029842 4510 0.74 - - - - - - - - - 0.740 solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]
55. ZFAND6 ENSGALG00000006505 48 0.736 - - - - - - 0.736 - - - zinc finger AN1-type containing 6 [Source:NCBI gene;Acc:415483]
56. PPP1R13B ENSGALG00000011548 88 0.735 - - - - - - 0.735 - - - protein phosphatase 1 regulatory subunit 13B [Source:HGNC Symbol;Acc:HGNC:14950]
57. EBF2 ENSGALG00000000242 753 0.734 - - - - - 0.734 - - - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
58. NUCB2 ENSGALG00000006147 1380 0.733 - - - - - - - 0.733 - - nucleobindin 2 [Source:NCBI gene;Acc:423071]
59. TNNT2 ENSGALG00000000302 568 0.732 - - - - - - 0.732 - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
60. SERPINB14 SERPINB14 196 0.73 - - - - - 0.730 - - - -
61. SBF2 ENSGALG00000005716 134 0.73 - - - - - - 0.730 - - - SET binding factor 2 [Source:NCBI gene;Acc:423043]
62. LRRC42 ENSGALG00000010743 384 0.728 - - - - - - - - - 0.728 leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
63. GGH ENSGALG00000031130 40 0.727 - - - - - - 0.727 - - - gamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248]
64. KLHL2 ENSGALG00000009554 37 0.727 - - - - - - 0.727 - - - kelch like family member 2 [Source:NCBI gene;Acc:422422]
65. MRS2 ENSGALG00000040084 454 0.724 - - - - - - - - - 0.724 MRS2, magnesium transporter [Source:HGNC Symbol;Acc:HGNC:13785]
66. IQCG ENSGALG00000007607 17 0.723 - - - - - - 0.723 - - - IQ motif containing G [Source:HGNC Symbol;Acc:HGNC:25251]
67. Mar-03 Mar-03 45 0.714 - - - - - - 0.714 - - -
68. ARL16 49 0.711 - - - - - - 0.711 - - - ADP ribosylation factor like GTPase 16, transcript variant X1
69. TPD52 ENSGALG00000040167 9891 0.71 - - - - - - - - - 0.710 tumor protein D52 [Source:NCBI gene;Acc:770339]
70. TIMD4 ENSGALG00000003876 61 0.71 - - - - 0.710 - - - - - T-cell immunoglobulin and mucin domain containing 4 [Source:NCBI gene;Acc:416250]
71. ABCC1 ENSGALG00000006646 2596 0.706 - - - - - - - - - 0.706 ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
72. ENSGALG00000027927 ENSGALG00000027927 654 0.706 - - - - - - - - - 0.706
73. LRRN4 ENSGALG00000008815 481 0.705 - - - - - - 0.705 - - - leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA