Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TRIO

Gene Name Gene ID Reads Annotation
TRIO TRIO 1601










Genes with expression patterns similar to TRIO

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. TRIO TRIO 1601 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. nr2f2 ENSDARG00000040926 5213 2.501 - - - - - 0.744 0.777 - 0.980 nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
3. prmt1 ENSDARG00000010246 11311 2.386 - - - - - 0.874 0.741 - 0.771 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
4. NGEF ENSDARG00000076179 445 1.879 - 0.899 - - - - - - 0.980 neuronal guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-130530-794]
5. ppig ENSDARG00000044431 3427 1.744 - - - - - - 0.765 - 0.979 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
6. si:ch211-10d23.5 ENSDARG00000095510 2632 1.719 - - - - - - - 0.741 0.978 si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
7. ef1 1343 1.716 - 0.739 - - - - - - 0.977 E74-like factor 1 (ets domain transcription factor), transcript variant X4
8. HPCAL1 ENSDARG00000022763 2885 1.715 - 0.742 - - - - - - 0.973 hippocalcin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1242]
9. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.709 - - 0.741 - - - - - 0.968 enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
10. si:ch211-191j22.3 ENSDARG00000095459 959 1.707 - - - - - - 0.728 - 0.979 si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
11. fkbp8 ENSDARG00000001734 1709 1.694 - 0.720 - - - - - - 0.974 FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
12. zgc:101640 733 1.674 - - - - - - - 0.746 0.928 zgc:101640, transcript variant X2
13. snrpe ENSDARG00000033175 7462 1.656 - - - - - - 0.771 - 0.885 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
14. apc ENSDARG00000058868 2605 1.646 - - - - - 0.720 - - 0.926 adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
15. ppp2r2d ENSDARG00000102009 5710 1.627 - - - - - - 0.701 - 0.926 protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
16. CR376848.1 ENSDARG00000115549 149 1.626 - 0.859 - - - - - 0.767 - neutral cholesterol ester hydrolase 1-like [Source:NCBI gene;Acc:797436]
17. cpsf3 ENSDARG00000027649 6897 1.622 - - - - - - 0.719 - 0.903 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
18. ptenb ENSDARG00000056623 5783 1.596 - - - - - 0.793 - - 0.803 phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
19. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 1.59 - 0.790 - - - - - 0.800 - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
20. caprin1b ENSDARG00000054272 7033 1.585 - - - - - 0.722 0.863 - - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
21. LPHN3 LPHN3 195 1.581 - 0.807 - - - - - 0.774 -
22. KANSL1 KANSL1 512 1.581 - 0.848 - - - 0.733 - - -
23. kifc1 ENSDARG00000001558 6658 1.575 - - - - - 0.806 - 0.769 - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
24. pl10 pl10 10795 1.575 - - - - - 0.827 0.748 - -
25. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 1.573 - - - - - - 0.817 0.756 - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
26. ndc1 ENSDARG00000021120 2417 1.57 - - - - - - 0.730 0.840 - NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
27. mon1a ENSDARG00000078585 554 1.56 - 0.843 - - - - - 0.717 - MON1 secretory trafficking family member A [Source:ZFIN;Acc:ZDB-GENE-070615-6]
28. AGAP1 ENSDARG00000062123, ENSDARG00000113863 2842 1.548 - - - - - 0.825 0.723 - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:ZFIN;Acc:ZDB-GENE-130405-1]
29. FAM72B ENSDARG00000070621 501 1.541 - - - - - 0.779 - 0.762 - family with sequence similarity 72 member B [Source:HGNC Symbol;Acc:HGNC:24805]
30. rad23aa ENSDARG00000020001 374 1.536 - - - - - 0.756 - 0.780 - RAD23 homolog A, nucleotide excision repair protein a [Source:ZFIN;Acc:ZDB-GENE-040808-59]
31. stim1a ENSDARG00000060723 1200 1.531 0.758 - - - - - 0.773 - - stromal interaction molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-914]
32. wsb1 ENSDARG00000021343 3828 1.526 - - - - - 0.712 0.814 - - WD repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1946]
33. clasp1a ENSDARG00000010280 1158 1.522 - 0.726 - - - - - 0.796 - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
34. srsf4 ENSDARG00000105293 9657 1.516 - - - - - 0.812 0.704 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
35. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.515 - - - - - 0.804 0.711 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
36. scaf4a ENSDARG00000077093 2408 1.506 - 0.746 - - - - 0.760 - - SR-related CTD-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9003]
37. CPEB2 ENSDARG00000052604 2646 1.49 - - - - - 0.744 0.746 - - cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
38. zfand6 ENSDARG00000098443 2507 1.489 0.714 - - - - - - 0.775 - zinc finger, AN1-type domain 6 [Source:ZFIN;Acc:ZDB-GENE-030131-8405]
39. LAMTOR4 ENSDARG00000045542 1181 1.485 - 0.778 - - - - 0.707 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7438]
40. whsc1l1 8544 1.483 - - - - - 0.759 0.724 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
41. vangl2 ENSDARG00000027397 2418 1.476 - - - - - 0.746 0.730 - - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
42. zswim5 ENSDARG00000055900 4243 1.47 - - - - - 0.754 0.716 - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
43. tbc1d12a ENSDARG00000038237 698 1.469 - - - - - 0.737 - 0.732 - TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
44. kif22 ENSDARG00000102624 3694 1.466 0.712 - - - - 0.754 - - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
45. phf16 phf16 1116 1.465 - - - - - - 0.716 0.749 -
46. dync1li2 ENSDARG00000035924, ENSDARG00000110202 1429 1.464 0.720 - - - - - - 0.744 - dynein, cytoplasmic 1, light intermediate chain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-156]
47. gfra1b ENSDARG00000102564 821 1.463 - 0.720 - - - 0.743 - - - gdnf family receptor alpha 1b [Source:ZFIN;Acc:ZDB-GENE-010226-3]
48. rab20 ENSDARG00000005049 346 1.459 - - - - - - 0.708 0.751 - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
49. CABZ01041002.1 CABZ01041002.1 957 1.459 - - - - - 0.721 - 0.738 -
50. stip1 ENSDARG00000004906 7742 1.459 - - - - - 0.706 0.753 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
51. CABZ01081749.1 CABZ01081749.1 637 1.458 - - - - - 0.707 - 0.751 -
52. C10H11orf30 C10H11orf30 1982 1.458 - 0.710 - - - 0.748 - - -
53. sult6b1 ENSDARG00000086826 2070 1.457 - 0.746 - - - - - 0.711 - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
54. si:dkey-7c18.24 ENSDARG00000041433, ENSDARG00000113434, ENSDARG00000116523 89 1.455 0.709 0.746 - - - - - - - si:dkey-7c18.24 [Source:ZFIN;Acc:ZDB-GENE-041014-63]
55. RNF145_1 RNF145_1 835 1.453 0.721 0.732 - - - - - - -
56. nedd4l ENSDARG00000060006 1669 1.451 - - - - - - 0.722 0.729 - neural precursor cell expressed, developmentally down-regulated 4-like [Source:ZFIN;Acc:ZDB-GENE-051118-2]
57. prp19 prp19 4804 1.445 - - - - - 0.734 0.711 - -
58. hoxa9b ENSDARG00000056819 3081 1.443 - 0.705 - - - 0.738 - - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
59. uba1 ENSDARG00000037559 11579 1.441 - - - - - 0.735 0.706 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
60. pitpnb ENSDARG00000036005 513 1.441 - - - - - - 0.741 0.700 - phosphatidylinositol transfer protein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-895]
61. CABZ01088061.1 CABZ01088061.1 695 1.44 - - - - - - 0.706 0.734 -
62. rfc5 ENSDARG00000035634 974 1.434 - - - - - - 0.706 0.728 - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
63. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.425 - - - - - 0.714 0.711 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
64. smarca5 ENSDARG00000052348 15433 1.407 - - - - - 0.702 0.705 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
65. cbl ENSDARG00000009958 1321 0.987 - - - - - - - - 0.987 Cbl proto-oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041114-207]
66. syt4 ENSDARG00000036505 421 0.986 - - - - - - - - 0.986 synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
67. otub1a ENSDARG00000055536 2892 0.986 - - - - - - - - 0.986 OTU deubiquitinase, ubiquitin aldehyde binding 1a [Source:ZFIN;Acc:ZDB-GENE-040718-108]
68. utp11l ENSDARG00000039958, ENSDARG00000109895 1509 0.985 - - - - - - - - 0.985 UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-8093]
69. homer3 homer3 1974 0.985 - - - - - - - - 0.985
70. ptprfa ENSDARG00000103479 1250 0.985 - - - - - - - - 0.985 protein tyrosine phosphatase, receptor type, f, a [Source:ZFIN;Acc:ZDB-GENE-020107-2]
71. ncl1 2835 0.985 - - - - - - - - 0.985 nicalin, transcript variant X3
72. tfdp1b ENSDARG00000016304 3071 0.984 - - - - - - - - 0.984 transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
73. KIF20B KIF20B 800 0.984 - - - - - - - - 0.984
74. ndst2a ENSDARG00000086269 754 0.984 - - - - - - - - 0.984 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]
75. smad2 ENSDARG00000006389 646 0.984 - - - - - - - - 0.984 SMAD family member 2 [Source:ZFIN;Acc:ZDB-GENE-990603-7]
76. SENP7 SENP7 1097 0.984 - - - - - - - - 0.984
77. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 0.984 - - - - - - - - 0.984 zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
78. nol10 ENSDARG00000020077 984 0.984 - - - - - - - - 0.984 nucleolar protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-764]
79. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 0.984 - - - - - - - - 0.984 ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
80. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.984 - - - - - - - - 0.984 G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
81. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 0.984 - - - - - - - - 0.984 kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
82. rabif ENSDARG00000002690, ENSDARG00000114340 891 0.984 - - - - - - - - 0.984 RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
83. pcloa ENSDARG00000063299 353 0.984 - - - - - - - - 0.984 piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
84. bcl9 ENSDARG00000036687 1124 0.984 - - - - - - - - 0.984 B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
85. plekhg5a ENSDARG00000025902 397 0.984 - - - - - - - - 0.984 pleckstrin homology domain containing, family G (with RhoGef domain) member 5a [Source:ZFIN;Acc:ZDB-GENE-060503-766]
86. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 0.984 - - - - - - - - 0.984 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
87. magi1b ENSDARG00000003169 2056 0.984 - - - - - - - - 0.984 membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
88. atf6 ENSDARG00000012656 3873 0.983 - - - - - - - - 0.983 activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
89. tsc22d2 ENSDARG00000041839 1109 0.983 - - - - - - - - 0.983 TSC22 domain family 2 [Source:ZFIN;Acc:ZDB-GENE-031001-12]
90. SURF2 ENSDARG00000112476 592 0.983 - - - - - - - - 0.983 surfeit 2 [Source:ZFIN;Acc:ZDB-GENE-040801-86]
91. rhogd ENSDARG00000030608, ENSDARG00000112157 599 0.983 - - - - - - - - 0.983 ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
92. PPP1R21 ENSDARG00000103144 385 0.982 - - - - - - - - 0.982 protein phosphatase 1, regulatory subunit 21 [Source:ZFIN;Acc:ZDB-GENE-041114-8]
93. si:ch73-109d9.1 ENSDARG00000052019 248 0.982 - - - - - - - - 0.982 si:ch73-109d9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-256]
94. ITPA ENSDARG00000057529 493 0.982 - - - - - - - - 0.982 inosine triphosphatase (nucleoside triphosphate pyrophosphatase) [Source:ZFIN;Acc:ZDB-GENE-070705-218]
95. stxbp5b ENSDARG00000029234 760 0.982 - - - - - - - - 0.982 syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
96. eefsec ENSDARG00000004696 791 0.982 - - - - - - - - 0.982 eukaryotic elongation factor, selenocysteine-tRNA-specific [Source:ZFIN;Acc:ZDB-GENE-051120-72]
97. dpp3 ENSDARG00000020676 2393 0.981 - - - - - - - - 0.981 dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
98. nr1d4b ENSDARG00000059370 243 0.981 - - - - - - - - 0.981 nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
99. si:ch211-208h7.4 si:ch211-208h7.4 1334 0.981 - - - - - - - - 0.981
100. gli2b ENSDARG00000020884 1468 0.981 - - - - - - - - 0.981 GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]

There are 1149 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA