Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRIM9

Gene Name Gene ID Reads Annotation
TRIM9 ENSGALG00000012367 1267 tripartite motif containing 9 [Source:HGNC Symbol;Acc:HGNC:16288]











Genes with expression patterns similar to TRIM9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRIM9 ENSGALG00000012367 1267 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 9 [Source:HGNC Symbol;Acc:HGNC:16288]
2. MAP2 ENSGALG00000002789 6597 1.738 - - - - - - - 0.943 0.795 - microtubule associated protein 2, transcript variant X33
3. L3HYPDH ENSGALG00000012011 2212 0.999 - - - - - - - 0.999 - - trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
4. SERPINH1 ENSGALG00000011214 15311 0.999 - - - - - - - 0.999 - - serpin family H member 1 [Source:NCBI gene;Acc:396228]
5. ARFGAP3 ENSGALG00000014140 4612 0.995 - - - - - - - 0.995 - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
6. SLC25A14 ENSGALG00000004063 5574 0.994 - - - - - - - 0.994 - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
7. PDIA5 ENSGALG00000011689 6913 0.993 - - - - - - - 0.993 - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
8. EEFSEC ENSGALG00000038684 298 0.991 - - - - - - - 0.991 - - eukaryotic elongation factor, selenocysteine-tRNA specific [Source:HGNC Symbol;Acc:HGNC:24614]
9. B9D1 ENSGALG00000005096 760 0.991 - - - - - - - 0.991 - - B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
10. TCTEX1D2 ENSGALG00000027722 2201 0.99 - - - - - - - 0.990 - - Tctex1 domain containing 2
11. TNPO3 ENSGALG00000039420 5178 0.99 - - - - - - - 0.990 - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
12. POLR3H ENSGALG00000011947 2899 0.99 - - - - - - - 0.990 - - RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
13. PRKAR2A ENSGALG00000007023 909 0.99 - - - - - - - 0.990 - - protein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]
14. C26H6ORF106 C26H6ORF106 2168 0.99 - - - - - - - 0.990 - -
15. COL14A1 ENSGALG00000037675 2652 0.99 - - - - - - - 0.990 - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
16. TLE3 ENSGALG00000008120 2655 0.989 - - - - - - - 0.989 - - transducin like enhancer of split 3, transcript variant X10
17. EPM2A ENSGALG00000012275 872 0.989 - - - - - - - 0.989 - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
18. GOT2 ENSGALG00000002321 4961 0.989 - - - - - - - 0.989 - - glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
19. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.989 - - - - - - - 0.989 - -
20. TNFRSF11B ENSGALG00000043167 911 0.989 - - - - - - - 0.989 - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
21. CCDC167 ENSGALG00000010151 3567 0.989 - - - - - - - 0.989 - - coiled-coil domain containing 167 [Source:NCBI gene;Acc:421433]
22. WDR91 ENSGALG00000011724 5787 0.989 - - - - - - - 0.989 - - WD repeat domain 91 [Source:NCBI gene;Acc:417939]
23. CLIP1 ENSGALG00000004467 1058 0.989 - - - - - - - 0.989 - - CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
24. MRPS31 ENSGALG00000017033 9287 0.988 - - - - - - - 0.988 - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
25. ELMO2 ENSGALG00000007246 4569 0.988 - - - - - - - 0.988 - - engulfment and cell motility 2 [Source:HGNC Symbol;Acc:HGNC:17233]
26. PM20D1 ENSGALG00000000724 2108 0.988 - - - - - - - 0.988 - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
27. KCNK5 ENSGALG00000034077 3233 0.987 - - - - - - - 0.987 - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
28. LYRM4 ENSGALG00000027339 2917 0.987 - - - - - - - 0.987 - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
29. BRMS1L ENSGALG00000010093 4964 0.986 - - - - - - - 0.986 - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
30. GNG10 ENSGALG00000015683 6905 0.986 - - - - - - - 0.986 - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
31. KPNA1 ENSGALG00000014426 2724 0.986 - - - - - - - 0.986 - - karyopherin subunit alpha 1 [Source:NCBI gene;Acc:418271]
32. RAB24 ENSGALG00000002984 6264 0.985 - - - - - - - 0.985 - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
33. MRPS7 ENSGALG00000007999 5445 0.985 - - - - - - - 0.985 - - mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:422122]
34. NOVA1 ENSGALG00000009850 7584 0.984 - - - - - - - 0.984 - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
35. CEP192 ENSGALG00000035625 2270 0.984 - - - - - - - 0.984 - - centrosomal protein 192 [Source:HGNC Symbol;Acc:HGNC:25515]
36. OTUD4 ENSGALG00000009968 3919 0.983 - - - - - - - 0.983 - - OTU deubiquitinase 4 [Source:HGNC Symbol;Acc:HGNC:24949]
37. CAPZA1 ENSGALG00000001547 24242 0.983 - - - - - - - 0.983 - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
38. CYB5B ENSGALG00000000660 9733 0.982 - - - - - - - 0.982 - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
39. ENSGALG00000002595 ENSGALG00000002595 32163 0.982 - - - - - - - 0.982 - -
40. HHIP ENSGALG00000009948 1536 0.981 - - - - - - - 0.981 - - hedgehog interacting protein [Source:HGNC Symbol;Acc:HGNC:14866]
41. BMP5 ENSGALG00000016293 2119 0.981 - - - - - - - 0.981 - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
42. SGCE ENSGALG00000009670 3070 0.98 - - - - - - - 0.980 - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
43. ARID4A ENSGALG00000012037 8554 0.98 - - - - - - - 0.980 - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
44. MFF ENSGALG00000003079 5289 0.978 - - - - - - - 0.978 - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
45. TRMT10A ENSGALG00000012264 2467 0.978 - - - - - - - 0.978 - - tRNA methyltransferase 10A [Source:HGNC Symbol;Acc:HGNC:28403]
46. ATPAF1 ENSGALG00000010444 3677 0.977 - - - - - - - 0.977 - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
47. LGMN ENSGALG00000010811 7401 0.977 - - - - - - - 0.977 - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
48. FAM136A ENSGALG00000042163 39487 0.975 - - - - - - - 0.975 - - family with sequence similarity 136 member A [Source:NCBI gene;Acc:426296]
49. SHROOM2 ENSGALG00000030802 4517 0.974 - - - - - - - 0.974 - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
50. UPF3B ENSGALG00000008618 12350 0.973 - - - - - - - 0.973 - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
51. PTP4A1 ENSGALG00000016271 23953 0.971 - - - - - - - 0.971 - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
52. ISCA1 ENSGALG00000012606 10342 0.967 - - - - - - - 0.967 - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
53. CAT ENSGALG00000030187 7534 0.963 - - - - - - - 0.963 - - catalase [Source:NCBI gene;Acc:423600]
54. RPB6 RPB6 9517 0.959 - - - - - - - 0.959 - -
55. NMD3 ENSGALG00000009533 8726 0.956 - - - - - - - 0.956 - - NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
56. NAT10 ENSGALG00000014573 12754 0.947 - - - - - - - 0.947 - - N-acetyltransferase 10 [Source:NCBI gene;Acc:426609]
57. COPS3 ENSGALG00000004834 16012 0.946 - - - - - - - 0.946 - - COP9 signalosome subunit 3 [Source:NCBI gene;Acc:416504]
58. GSTO1 ENSGALG00000008409 7561 0.943 - - - - - - - 0.943 - - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]
59. RFC4 ENSGALG00000008703 5842 0.942 - - - - - - - 0.942 - - replication factor C subunit 4 [Source:NCBI gene;Acc:424958]
60. DGKZ ENSGALG00000008380 5389 0.939 - - - - - - - 0.939 - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
61. IDI1 ENSGALG00000006723 7761 0.937 - - - - - - - 0.937 - - isopentenyl-diphosphate delta isomerase 1, transcript variant X1
62. CNOT6 ENSGALG00000034316 10496 0.936 - - - - - - - 0.936 - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
63. FAM122A ENSGALG00000006127 9630 0.934 - - - - - - - 0.934 - - family with sequence similarity 122A [Source:NCBI gene;Acc:422237]
64. UBE2F ENSGALG00000003812 13874 0.931 - - - - - - - 0.931 - - ubiquitin conjugating enzyme E2 F (putative) [Source:NCBI gene;Acc:424015]
65. CNDP2 ENSGALG00000019514 19531 0.929 - - - - - - - 0.929 - - carnosine dipeptidase 2 [Source:NCBI gene;Acc:421013]
66. ATG12 ENSGALG00000002345 3607 0.927 - - - - - - - 0.927 - - autophagy related 12 [Source:HGNC Symbol;Acc:HGNC:588]
67. MRPL38 ENSGALG00000002194 6648 0.926 - - - - - - - 0.926 - - mitochondrial ribosomal protein L38 [Source:NCBI gene;Acc:770172]
68. BDH1_1 ENSGALG00000023601 6109 0.926 - - - - - - - 0.926 - - 3-hydroxybutyrate dehydrogenase, type 1
69. PAX1 ENSGALG00000039040 3339 0.924 - - - - - - - 0.924 - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
70. PHLDA2 ENSGALG00000032687 7733 0.923 - - - - - - - 0.923 - - pleckstrin homology like domain family A member 2 [Source:NCBI gene;Acc:423088]
71. N6AMT2 N6AMT2 4703 0.921 - - - - - - - 0.921 - -
72. PPP1CC ENSGALG00000004571 14748 0.907 - - - - - - - 0.907 - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
73. ACO2 ENSGALG00000011950 30387 0.904 - - - - - - - 0.904 - - aconitase 2 [Source:NCBI gene;Acc:374009]
74. AES ENSGALG00000029503 17676 0.9 - - - - - - - 0.900 - - amino-terminal enhancer of split [Source:HGNC Symbol;Acc:HGNC:307]
75. KIF2C ENSGALG00000010120 8999 0.898 - - - - - - - 0.898 - - kinesin family member 2C, transcript variant X1
76. PRCC ENSGALG00000040696 9346 0.896 - - - - - - - 0.896 - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
77. BAZ2B ENSGALG00000012579 5525 0.863 - - - - - - - 0.863 - - bromodomain adjacent to zinc finger domain 2B [Source:NCBI gene;Acc:395400]
78. DPYSL2 ENSGALG00000000227 9668 0.86 - - - - - - - 0.860 - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
79. SPINZ SPINZ 10341 0.859 - - - - - - - 0.859 - -
80. CDK8 ENSGALG00000017104 5956 0.851 - - - - - - - 0.851 - - cyclin dependent kinase 8, transcript variant X4
81. ZBTB8A ZBTB8A 2088 0.842 - - - - - - - 0.842 - -
82. ID1 ENSGALG00000034661 44524 0.841 - - - - - - - 0.841 - - inhibitor of DNA binding 1, HLH protein [Source:NCBI gene;Acc:395282]
83. RSL1D1 ENSGALG00000033690 13638 0.839 - - - - - - - 0.839 - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
84. MRPL14 ENSGALG00000010285 11820 0.836 - - - - - - - 0.836 - - mitochondrial ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:14279]
85. TIMM22 ENSGALG00000004383 7619 0.834 - - - - - - - 0.834 - - translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]
86. SETBP1 ENSGALG00000036775 6448 0.832 - - - - - - - 0.832 - - SET binding protein 1 [Source:HGNC Symbol;Acc:HGNC:15573]
87. CSNK1G1 ENSGALG00000030812 31618 0.828 - - - - - - - 0.828 - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
88. GMNN ENSGALG00000013626 15838 0.818 - - - - - - - 0.818 - - geminin, DNA replication inhibitor [Source:NCBI gene;Acc:421004]
89. UQCR11 ENSGALG00000001096 25245 0.81 - - - - - - - 0.810 - - ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
90. HOXD4 ENSGALG00000023419 6073 0.808 - - - - - 0.808 - - - - homeobox D4 [Source:NCBI gene;Acc:424139]
91. UBP1 ENSGALG00000035630 13359 0.806 - - - - - - - 0.806 - - upstream binding protein 1 [Source:HGNC Symbol;Acc:HGNC:12507]
92. TMED5 27507 0.802 - - - - - - - 0.802 - - transmembrane p24 trafficking protein 5
93. SVIL ENSGALG00000007331 12032 0.794 - - - - - - - 0.794 - - supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
94. RCHY1 ENSGALG00000023335 12947 0.792 - - - - - - - 0.792 - - ring finger and CHY zinc finger domain containing 1 [Source:NCBI gene;Acc:771726]
95. WSCD2 ENSGALG00000004849 477 0.791 - - - - - - - - 0.791 - WSC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29117]
96. MARCKSL1 ENSGALG00000032335 88728 0.791 - - - - - 0.791 - - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
97. CENPF ENSGALG00000009690 10429 0.782 - - - - - - - 0.782 - - centromere protein F [Source:NCBI gene;Acc:395357]
98. LOC419390 ENSGALG00000001136 607 0.776 - - - - - 0.776 - - - - hairy and enhancer of split 5-like, transcript variant X1
99. NHLH1 ENSGALG00000025817 1617 0.776 - - - - - 0.776 - - - - nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
100. PAX-7 PAX-7 3856 0.77 - - - - - 0.770 - - - -

There are 31 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA