Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TRIM8

Gene Name Gene ID Reads Annotation
TRIM8 TRIM8 5










Genes with expression patterns similar to TRIM8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. TRIM8 TRIM8 5 5 - - 1.000 - 1.000 - 1.000 1.000 1.000
2. si:dkey-286j17.3 si:dkey-286j17.3 8 2 - - - - 1.000 - 1.000 - -
3. gabrr2b ENSDARG00000014057 9 2 - - - - 1.000 - 1.000 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
4. si:ch73-27e22.2 ENSDARG00000092266 8 2 - - - - 1.000 - - 1.000 - si:ch73-27e22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-230]
5. zgc:173443 ENSDARG00000034403 26 2 - - - - 1.000 - 1.000 - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
6. zgc:172131 ENSDARG00000076269 32 1.928 - - 0.928 - 1.000 - - - - zgc:172131 [Source:ZFIN;Acc:ZDB-GENE-080204-47]
7. slc6a2 ENSDARG00000016141 49 1.924 - - - - 0.924 - 1.000 - - solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
8. slc9a3.2 ENSDARG00000036722 31 1.853 - - - - 1.000 - 0.853 - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-640]
9. st6galnac ENSDARG00000086292 29 1.832 - - - - - - 1.000 0.832 - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
10. phf21aa ENSDARG00000006878 31 1.825 - - 0.825 - - - 1.000 - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
11. QSOX2 ENSDARG00000077174 26 1.786 - - 0.875 - - - 0.911 - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
12. zgc:175107 ENSDARG00000075417 39 1.786 - - - - - - 0.856 0.930 - zgc:175107 [Source:ZFIN;Acc:ZDB-GENE-080220-38]
13. zgc:172133 ENSDARG00000075248 6 1.751 - - - - - - 1.000 0.751 - zgc:172133 [Source:ZFIN;Acc:ZDB-GENE-080204-48]
14. CABZ01073654.1 CABZ01073654.1 16 1.737 - - - - - - 0.916 0.821 -
15. lratb 3 1.733 - - - - 0.733 - 1.000 - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
16. zfyve20 zfyve20 3 1.72 - - 0.902 - - - - 0.818 -
17. ENSDARG00000088389 ENSDARG00000088389 2 1.711 - - - - 1.000 - - - 0.711
18. pcdh2g16 1 1.711 - - - - 1.000 - - - 0.711 protocadherin 2 gamma 16
19. ssh1a ENSDARG00000056780 3 1.711 - - - - 1.000 - - - 0.711 slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
20. fgf10b ENSDARG00000100475 17 1.687 - - - - - - 0.976 - 0.711 fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
21. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1.625 - - 0.795 - 0.830 - - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
22. rab11fip1a ENSDARG00000046124 69 1.55 - - - - - - 0.845 0.705 - RAB11 family interacting protein 1 (class I) a [Source:ZFIN;Acc:ZDB-GENE-051113-116]
23. GRAMD3 GRAMD3 4 1 - - - - - - - 1.000 -
24. zp2.5 ENSDARG00000086522 15 1 - - - - - - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
25. si:dkeyp-73d8.12 si:dkeyp-73d8.12 0 1 - - - - 1.000 - - - -
26. si:dkey-252l8.1 si:dkey-252l8.1 2 1 - - - - 1.000 - - - -
27. CU104716.2 CU104716.2 10 1 - - - - - - 1.000 - -
28. UNC119 UNC119 104 1 - - - - 1.000 - - - -
29. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - - 1.000 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
30. il11a ENSDARG00000037859 5 1 - - - - - - 1.000 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
31. DGKG ENSDARG00000062696 1 1 - - - - 1.000 - - - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
32. KRT9 KRT9 7 1 - - - - 1.000 - - - -
33. ZC3H12A ENSDARG00000005271 5 1 - - - - - - 1.000 - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
34. wee1 ENSDARG00000093864, ENSDARG00000114333, ENSDARG00000115653 1 1 - - - - 1.000 - - - - WEE1 G2 checkpoint kinase [Source:ZFIN;Acc:ZDB-GENE-030131-5268]
35. BX323836.1 BX323836.1 1 1 - - - - - - 1.000 - -
36. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - - - - 1.000 - - - -
37. olfcg5 ENSDARG00000102459 5 1 - - - - 1.000 - - - - olfactory receptor C family, g5 [Source:ZFIN;Acc:ZDB-GENE-060503-913]
38. si:ch211-149k23.4 si:ch211-149k23.4 0 1 - - - - 1.000 - - - -
39. CU326366.2 ENSDARG00000068593 11 1 - - - - 1.000 - - - -
40. U1_16 U1_16 0 1 - - - - 1.000 - - - -
41. CR388160.3 CR388160.3 0 1 - - - - 1.000 - - - -
42. si:dkey-111k7.3 si:dkey-111k7.3 0 1 - - - - 1.000 - - - -
43. ftr55 ENSDARG00000009161 3 1 - - - - 1.000 - - - - finTRIM family, member 55 [Source:ZFIN;Acc:ZDB-GENE-070424-161]
44. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 1 - - - - - - 1.000 - - odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]
45. Telomerase-vert Telomerase-vert 8 1 - - - - 1.000 - - - -
46. BX119910.9 BX119910.9 7 1 - - - - 1.000 - - - -
47. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 1 - - - - - - 1.000 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
48. si:ch211-260g14.10 si:ch211-260g14.10 14 1 - - - - - - - 1.000 -
49. CU672227.1 ENSDARG00000105807 15 1 - - - - - - 1.000 - -
50. si:dkeyp-3f10.17 ENSDARG00000087254 1 1 - - - - - - 1.000 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
51. smad6b ENSDARG00000031763 12 1 - - - - - - 1.000 - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
52. CSF3 CSF3 4 1 - - - - 1.000 - - - -
53. CLNK 8 1 - - - - - - 1.000 - - cytokine dependent hematopoietic cell linker
54. tmem54 tmem54 3 1 - - - - 1.000 - - - -
55. CR381673.3 CR381673.3 4 1 - - - - 1.000 - - - -
56. CU695216.1 CU695216.1 0 1 - - - - 1.000 - - - -
57. htr5a htr5a 4 1 - - - - 1.000 - - - -
58. si:ch211-202h22.9 ENSDARG00000079980 2 1 - - - - 1.000 - - - - si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1143]
59. CR749167.1 ENSDARG00000100165 38 1 - - - - 1.000 - - - -
60. si:dkey-231k6.6 si:dkey-231k6.6 2 1 - - - - 1.000 - - - -
61. sagb ENSDARG00000038378 28 1 - - - - 1.000 - - - - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
62. BX005001.2 BX005001.2 2 1 - - - - - - - 1.000 -
63. FP236631.1 FP236631.1 3 1 - - - - - - - 1.000 -
64. taar20t ENSDARG00000095035 1 1 - - - - 1.000 - - - - trace amine associated receptor 20t [Source:ZFIN;Acc:ZDB-GENE-060414-18]
65. si:ch211-198e13.3 5 1 - - - - 1.000 - - - - si:ch211-198e13.3, transcript variant X1
66. usp47 ENSDARG00000102645 16 1 - - - - - - - 1.000 - ubiquitin specific peptidase 47 [Source:ZFIN;Acc:ZDB-GENE-070719-7]
67. BX511021.2 ENSDARG00000097646 5 1 - - - - - - 1.000 - -
68. LRRC69 LRRC69 1 1 - - - - - - 1.000 - -
69. XKR8 XKR8 9 1 - - - - - - 1.000 - -
70. nudt4b ENSDARG00000045878 10 1 - - - - 1.000 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
71. si:dkey-206f10.5 si:dkey-206f10.5 1 1 - - - - 1.000 - - - -
72. si:dkey-16p6.1_2 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 1 1 - - - - - - 1.000 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
73. trpm3 ENSDARG00000039181 2 1 - - - - 1.000 - - - - transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
74. BX901974.1 ENSDARG00000067592 2 1 - - - - - - 1.000 - -
75. avpr2aa ENSDARG00000007436 43 1 - - - - - - 1.000 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
76. CELA1 CELA1 14 1 - - - - - - 1.000 - -
77. si:ch73-17k20.1 si:ch73-17k20.1 2 1 - - - - 1.000 - - - -
78. CR556708.1 ENSDARG00000100565 6 1 - - - - 1.000 - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
79. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 - - - - 1.000 - - - -
80. CABZ01031933.1 CABZ01031933.1 1 1 - - - - - - 1.000 - -
81. lzts2b ENSDARG00000077207 22 1 - - - - - - 1.000 - - leucine zipper, putative tumor suppressor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-9587]
82. si:dkeyp-91h9.1 si:dkeyp-91h9.1 2 1 - - - - - - 1.000 - -
83. btr27 btr27 0 1 - - - - 1.000 - - - -
84. LRCH4 ENSDARG00000068258 22 1 - - - - - - - 1.000 - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
85. col5a2b ENSDARG00000024847 17 1 - - - - 1.000 - - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
86. npffr1l3 ENSDARG00000010712 18 1 - - - - - - 1.000 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
87. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
88. dpyda dpyda 12 1 - - - - 1.000 - - - -
89. SH3TC1 ENSDARG00000077330 8 1 - - - - 1.000 - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
90. si:ch211-120f16.3 si:ch211-120f16.3 0 1 - - - - 1.000 - - - -
91. si:ch211-233m11.3 si:ch211-233m11.3 1 1 - - - - - - 1.000 - -
92. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - 1.000 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
93. psme2 ENSDARG00000033144 3 1 - - - - - - - 1.000 - proteasome activator subunit 2 [Source:ZFIN;Acc:ZDB-GENE-991110-16]
94. dctn1a ENSDARG00000019743 45 1 - - - - - - 1.000 - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
95. pxn pxn 10 1 - - - - - - 1.000 - -
96. cart1 ENSDARG00000070930 46 1 - - - - - - 1.000 - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
97. si:dkey-47k20.6 si:dkey-47k20.6 2 1 - - - - - - 1.000 - -
98. rbm22 ENSDARG00000010238 523 1 - - - - 1.000 - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
99. si:ch73-248e21.5 ENSDARG00000088283 19 1 - - - - - - 1.000 - - si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
100. irgq2 ENSDARG00000068657 4 1 - - - - - - 1.000 - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]

There are 703 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA