Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRIM71

Gene Name Gene ID Reads Annotation
TRIM71 ENSGALG00000019622 1633 tripartite motif containing 71 [Source:NCBI gene;Acc:428445]











Genes with expression patterns similar to TRIM71

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRIM71 ENSGALG00000019622 1633 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
2. TRAM2 ENSGALG00000016673 438 1.747 - - - - - - 0.834 0.913 - - translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]
3. SEMA3E ENSGALG00000038225 677 1.708 - - - - - - - 0.906 0.802 - semaphorin 3E [Source:NCBI gene;Acc:374089]
4. ORAI1 ENSGALG00000004240 515 1.675 - - - - - - 0.741 0.934 - - ORAI calcium release-activated calcium modulator 1 [Source:NCBI gene;Acc:416845]
5. H4-I H4-I 2327 1.642 - - - - - - - 0.911 0.731 -
6. SLC25A48 ENSGALG00000006341 2606 1.632 - - - - - - - 0.911 0.721 - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
7. TMEM214 ENSGALG00000022850 7943 1.621 - - - - - - 0.799 0.822 - - transmembrane protein 214 [Source:HGNC Symbol;Acc:HGNC:25983]
8. PSMD1 ENSGALG00000007664 7609 1.617 0.724 - - - - - - 0.893 - - proteasome 26S subunit, non-ATPase 1 [Source:NCBI gene;Acc:424926]
9. RDX ENSGALG00000017153 6734 1.612 0.743 - - - - - - 0.869 - - radixin [Source:NCBI gene;Acc:395511]
10. RBBP8 ENSGALG00000014982 3255 1.596 - - - - - - - 0.737 0.859 - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
11. FLRT3 ENSGALG00000008716 593 1.58 - - - - - - 0.737 - 0.843 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
12. PLCXD1 ENSGALG00000016721 289 1.576 - - - - - - 0.852 0.724 - - phosphatidylinositol specific phospholipase C X domain containing 1 [Source:NCBI gene;Acc:418673]
13. GSTA3 ENSGALG00000016325 1254 1.556 - - - - - - - 0.778 0.778 - glutathione S-transferase alpha 3 [Source:NCBI gene;Acc:414896]
14. ANKRD50 ENSGALG00000011831 2870 1.507 - - - - - - - 0.721 0.786 - ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
15. UHRF2 ENSGALG00000015052 1268 1.483 - - - - - - 0.736 - 0.747 - ubiquitin like with PHD and ring finger domains 2 [Source:HGNC Symbol;Acc:HGNC:12557]
16. VRK1 ENSGALG00000011116 4524 1.461 0.713 - - - - - - - 0.748 - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
17. KIAA1324L ENSGALG00000030324 1695 1.453 - - - - - - 0.731 - 0.722 - KIAA1324 like [Source:HGNC Symbol;Acc:HGNC:21945]
18. GRIN3A ENSGALG00000015551 856 1.453 - - - - - - 0.731 - 0.722 - glutamate ionotropic receptor NMDA type subunit 3A [Source:HGNC Symbol;Acc:HGNC:16767]
19. ENSGALG00000003515 ENSGALG00000003515 1003 1.42 0.708 - - - - - - - 0.712 -
20. TES ENSGALG00000031934 5908 0.941 - - - - - - - 0.941 - - testin LIM domain protein [Source:NCBI gene;Acc:395332]
21. C4BPA ENSGALG00000001175 4278 0.936 - - - - - - - 0.936 - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
22. ZBTB26 ENSGALG00000042762 1920 0.935 - - - - - - - 0.935 - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
23. POLA1 ENSGALG00000016312 9440 0.935 - - - - - - - 0.935 - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
24. CCDC51 ENSGALG00000006465 1845 0.933 - - - - - - - 0.933 - - coiled-coil domain containing 51, transcript variant X1
25. CENPC1 CENPC1 3324 0.931 - - - - - - - 0.931 - -
26. GADD45 GADD45 8780 0.928 - - - - - - - 0.928 - -
27. EDA ENSGALG00000035966 602 0.926 - - - - - - - 0.926 - - ectodysplasin A [Source:HGNC Symbol;Acc:HGNC:3157]
28. PYGL ENSGALG00000012365 4691 0.925 - - - - - - - 0.925 - - glycogen phosphorylase L [Source:NCBI gene;Acc:378909]
29. DBR1 ENSGALG00000043797 1896 0.924 - - - - - - - 0.924 - - debranching RNA lariats 1 [Source:NCBI gene;Acc:429118]
30. ARAP2 ENSGALG00000041373 233 0.923 - - - - - - - 0.923 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:16924]
31. LRRC45 ENSGALG00000002877 1751 0.922 - - - - - - - 0.922 - - leucine rich repeat containing 45 [Source:NCBI gene;Acc:770573]
32. ENSGALG00000006569 ENSGALG00000006569 2169 0.919 - - - - - - - 0.919 - -
33. ABCB10 ENSGALG00000011096 1407 0.919 - - - - - - - 0.919 - - ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
34. LDHA ENSGALG00000006300 4796 0.919 - - - - - - - 0.919 - - lactate dehydrogenase A [Source:NCBI gene;Acc:396221]
35. SOX5 ENSGALG00000032768 998 0.918 - - - - - - - 0.918 - - SRY-box 5 [Source:NCBI gene;Acc:418195]
36. NXT2 ENSGALG00000008092 2477 0.918 - - - - - - - 0.918 - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
37. RASGEF1A ENSGALG00000002525 918 0.917 - - - - - - - 0.917 - - RasGEF domain family member 1A [Source:HGNC Symbol;Acc:HGNC:24246]
38. GPX7 ENSGALG00000010633 7224 0.916 - - - - - - - 0.916 - - glutathione peroxidase 7 [Source:NCBI gene;Acc:424643]
39. CLUH ENSGALG00000005854 2100 0.915 - - - - - - - 0.915 - - clustered mitochondria homolog [Source:HGNC Symbol;Acc:HGNC:29094]
40. CHALK5 CHALK5 1351 0.915 - - - - - - - 0.915 - -
41. PAMR1 ENSGALG00000007886 928 0.914 - - - - - - - 0.914 - - peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:HGNC:24554]
42. LAMP2 ENSGALG00000008572 198 0.914 - - - - - - - 0.914 - - lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
43. CHUK ENSGALG00000003289 5698 0.913 - - - - - - - 0.913 - - conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
44. TFG ENSGALG00000015299 849 0.913 - - - - - - - 0.913 - - TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
45. KIAA0930 ENSGALG00000014226 1243 0.913 - - - - - - - 0.913 - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
46. LOC422106 ENSGALG00000019757 453 0.913 - - - - - - - 0.913 - - uncharacterized LOC422106
47. LIPG ENSGALG00000043734 2490 0.912 - - - - - - - 0.912 - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
48. SLC41A1 ENSGALG00000000721 1604 0.912 - - - - - - - 0.912 - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
49. SALL1 ENSGALG00000039238 3740 0.911 - - - - - - - 0.911 - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
50. ENSGALG00000001854 ENSGALG00000001854 965 0.911 - - - - - - - 0.911 - -
51. CASP7 ENSGALG00000008933 506 0.911 - - - - - - - 0.911 - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
52. ECI2 ENSGALG00000012809 3692 0.91 - - - - - - - 0.910 - - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
53. HSDL1 ENSGALG00000003273 1108 0.908 - - - - - - - 0.908 - - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
54. HSPA13 ENSGALG00000019201 712 0.908 - - - - - - - 0.908 - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
55. EX-FABP EX-FABP 516 0.908 - - - - - - - 0.908 - -
56. NIT1 ENSGALG00000007585 1256 0.908 - - - - - - - 0.908 - - nitrilase 1 [Source:HGNC Symbol;Acc:HGNC:7828]
57. SENP5 ENSGALG00000008545 909 0.907 - - - - - - - 0.907 - - SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
58. YARS2 503 0.907 - - - - - - - 0.907 - - tyrosyl-tRNA synthetase 2
59. ENSGALG00000004032 ENSGALG00000004032 2010 0.907 - - - - - - - 0.907 - -
60. RIN3 ENSGALG00000010806 729 0.907 - - - - - - - 0.907 - - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
61. DSG2 ENSGALG00000015142 67 0.906 - - - - - - - 0.906 - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
62. NRG4 ENSGALG00000002952 1440 0.906 - - - - - - - 0.906 - - neuregulin 4 [Source:NCBI gene;Acc:415354]
63. TRIM62 ENSGALG00000028437 5124 0.905 - - - - - - - 0.905 - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
64. DNAJC11 ENSGALG00000000627 769 0.905 - - - - - - - 0.905 - - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
65. SEC11C ENSGALG00000031663 4266 0.905 - - - - - - - 0.905 - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
66. CECR5L ENSGALG00000005020 116 0.904 - - - - - - - 0.904 - - cat eye syndrome chromosome region, candidate 5-like
67. ANXA6 ENSGALG00000004357 2891 0.904 - - - - - - - 0.904 - - annexin A6 [Source:NCBI gene;Acc:395481]
68. AMER1 ENSGALG00000007599 994 0.904 - - - - - - - 0.904 - - APC membrane recruitment protein 1 [Source:HGNC Symbol;Acc:HGNC:26837]
69. MRC1 ENSGALG00000008629 259 0.904 - - - - - - - 0.904 - - Gallus gallus mannose receptor C-type 1 (MRC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001319007]
70. II II 929 0.903 - - - - - - - 0.903 - -
71. UBA7 ENSGALG00000036263 2918 0.902 - - - - - - - 0.902 - - ubiquitin-like modifier activating enzyme 7
72. VPS37A ENSGALG00000013646 55 0.902 - - - - - - - 0.902 - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
73. GAA ENSGALG00000038853 158 0.902 - - - - - - - 0.902 - - glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
74. SLC30A2 ENSGALG00000010375 44 0.902 - - - - - - - 0.902 - - solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
75. CWH43 ENSGALG00000041921 68 0.902 - - - - - - - 0.902 - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
76. FUBP1 ENSGALG00000008939 2850 0.902 - - - - - - - 0.902 - - far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
77. HDAC4 ENSGALG00000004288 2124 0.901 - - - - - - - 0.901 - - histone deacetylase 4 [Source:NCBI gene;Acc:374207]
78. MDM4 ENSGALG00000000636 91 0.901 - - - - - - - 0.901 - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
79. TMEM200A ENSGALG00000002282 77 0.901 - - - - - - - 0.901 - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
80. FAM21A FAM21A 251 0.9 - - - - - - 0.900 - - -
81. FAM82B FAM82B 374 0.899 - - - - - - 0.899 - - -
82. TCEANC ENSGALG00000016581 948 0.899 - - - - - - - 0.899 - - transcription elongation factor A N-terminal and central domain containing [Source:HGNC Symbol;Acc:HGNC:28277]
83. STK17B ENSGALG00000007924 519 0.897 - - - - - - - 0.897 - - serine/threonine kinase 17b [Source:NCBI gene;Acc:424049]
84. TRMT61B ENSGALG00000008979 615 0.897 - - - - - - - 0.897 - - tRNA methyltransferase 61B [Source:HGNC Symbol;Acc:HGNC:26070]
85. CHKA ENSGALG00000036754 5077 0.896 - - - - - - - 0.896 - - choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
86. COL6A2 ENSGALG00000039216 892 0.896 - - - - - - - 0.896 - - collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
87. GALK2 ENSGALG00000036201 1016 0.896 - - - - - - - 0.896 - - galactokinase 2 [Source:NCBI gene;Acc:415596]
88. RPAP2 ENSGALG00000005953 2085 0.895 - - - - - - - 0.895 - - RNA polymerase II associated protein 2 [Source:HGNC Symbol;Acc:HGNC:25791]
89. MSRB1 ENSGALG00000005414 4197 0.895 - - - - - - - 0.895 - - methionine sulfoxide reductase B1 [Source:NCBI gene;Acc:416540]
90. CADM2 ENSGALG00000043393 810 0.895 - - - - - - 0.895 - - - cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:29849]
91. PRPSAP1 ENSGALG00000021539 3517 0.895 - - - - - - - 0.895 - - phosphoribosyl pyrophosphate synthetase associated protein 1 [Source:HGNC Symbol;Acc:HGNC:9466]
92. DCP1B 1306 0.894 - - - - - - - - 0.894 - decapping mRNA 1B
93. B3GNT7 ENSGALG00000007701 929 0.894 - - - - - - - 0.894 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
94. TM2D3 ENSGALG00000026271 2566 0.892 - - - - - - - 0.892 - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
95. PHLPP2 ENSGALG00000000875 561 0.892 - - - - - - - 0.892 - - PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]
96. PINK1 ENSGALG00000037593 3794 0.892 - - - - - - - 0.892 - - PTEN induced putative kinase 1 [Source:HGNC Symbol;Acc:HGNC:14581]
97. HYOU1 ENSGALG00000007659 3555 0.891 - - - - - - - 0.891 - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
98. DEDD ENSGALG00000043129 3422 0.891 - - - - - - - 0.891 - - death effector domain containing [Source:HGNC Symbol;Acc:HGNC:2755]
99. ANKRA2 ENSGALG00000013511 3460 0.89 - - - - - - - 0.890 - - ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
100. C15ORF23 C15ORF23 14264 0.888 - - - - - - - 0.888 - -

There are 542 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA