Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRIM50

Gene Name Gene ID Reads Annotation
TRIM50 ENSGALG00000021696 1 tripartite motif containing 50 [Source:HGNC Symbol;Acc:HGNC:19017]











Genes with expression patterns similar to TRIM50

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRIM50 ENSGALG00000021696 1 1 - - 1.000 - - - - - - - tripartite motif containing 50 [Source:HGNC Symbol;Acc:HGNC:19017]
2. FAM19A2 ENSGALG00000019361 3 1 - - 1.000 - - - - - - - family with sequence similarity 19 member A2, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21589]
3. KCNRG ENSGALG00000017012 4 1 - - 1.000 - - - - - - - potassium channel regulator [Source:HGNC Symbol;Acc:HGNC:18893]
4. ENSGALG00000009151 ENSGALG00000009151 6 1 - - 1.000 - - - - - - -
5. OGFR ENSGALG00000005609 3 1 - - 1.000 - - - - - - - opioid growth factor receptor [Source:HGNC Symbol;Acc:HGNC:15768]
6. FAM155B ENSGALG00000041437 1 1 - - 1.000 - - - - - - - family with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]
7. RAB17 ENSGALG00000003899 1 1 - - 1.000 - - - - - - - RAB17, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16523]
8. BPIFB6 ENSGALG00000006674 1 1 - - 1.000 - - - - - - - BPI fold containing family B member 6 [Source:HGNC Symbol;Acc:HGNC:16504]
9. CISH ENSGALG00000002260 1 1 - - 1.000 - - - - - - - cytokine inducible SH2 containing protein [Source:NCBI gene;Acc:395335]
10. ENSGALG00000001345 ENSGALG00000001345 5 1 - - 1.000 - - - - - - -
11. OPRK1 ENSGALG00000015269 1 1 - - 1.000 - - - - - - - Gallus gallus opioid receptor kappa 1 (OPRK1), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318774]
12. PTCHD3 ENSGALG00000023347 5 1 - - 1.000 - - - - - - - patched domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24776]
13. DENND1B ENSGALG00000002246 6 1 - - 1.000 - - - - - - - DENN domain containing 1B [Source:HGNC Symbol;Acc:HGNC:28404]
14. MCMDC2 ENSGALG00000031863 3 1 - - 1.000 - - - - - - - minichromosome maintenance domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26368]
15. ENSGALG00000001724 ENSGALG00000001724 1 1 - - 1.000 - - - - - - -
16. U5 U5 1 1 - - 1.000 - - - - - - -
17. SNORA63 SNORA63 2 1 - - 1.000 - - - - - - -
18. ENSGALG00000000382 ENSGALG00000000382 2 1 - - 1.000 - - - - - - -
19. LOC427545 ENSGALG00000004428 3 1 - - 1.000 - - - - - - - histamine H3 receptor-like
20. HHLA2 ENSGALG00000022871 19 0.902 - - 0.902 - - - - - - - HERV-H LTR-associating 2 [Source:HGNC Symbol;Acc:HGNC:4905]
21. THAP1 ENSGALG00000015385 15 0.902 - - 0.902 - - - - - - - THAP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20856]
22. SLC22A3 ENSGALG00000020002 4 0.902 - - 0.902 - - - - - - - solute carrier family 22 member 3 [Source:HGNC Symbol;Acc:HGNC:10967]
23. NCEH1 ENSGALG00000009170 8 0.897 - - 0.897 - - - - - - - neutral cholesterol ester hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:29260]
24. ALDH6A1 ENSGALG00000010211 29 0.855 - - 0.855 - - - - - - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
25. TEKT4 ENSGALG00000005247 20 0.848 - - 0.848 - - - - - - - tektin 4 [Source:HGNC Symbol;Acc:HGNC:31012]
26. SPEG ENSGALG00000043198 2 0.811 - - 0.811 - - - - - - - SPEG complex locus, transcript variant X12
27. CCDC3 ENSGALG00000030140 258 0.796 - - 0.796 - - - - - - - coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]
28. ENSGALG00000001478 ENSGALG00000001478 23 0.794 - - 0.794 - - - - - - -
29. EPYC ENSGALG00000011269 17 0.79 - - 0.790 - - - - - - - epiphycan [Source:NCBI gene;Acc:417890]
30. MYOM2 ENSGALG00000016342 62 0.79 - - 0.790 - - - - - - - myomesin 2 [Source:NCBI gene;Acc:396034]
31. CGTL ENSGALG00000012847 2 0.79 - - 0.790 - - - - - - - cystine/glutamate transporter-like, transcript variant X5
32. VIL1 ENSGALG00000037286 5 0.79 - - 0.790 - - - - - - - villin 1 [Source:NCBI gene;Acc:396423]
33. MBL2 ENSGALG00000002507 17 0.785 - - 0.785 - - - - - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
34. PRLL ENSGALG00000009603 30 0.78 - - 0.780 - - - - - - - prolactin-like protein [Source:NCBI gene;Acc:417800]
35. AQP12 AQP12 11 0.775 - - 0.775 - - - - - - -
36. C8B ENSGALG00000010853 21 0.774 - - 0.774 - - - - - - - Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
37. TMEM181 ENSGALG00000013737 19 0.77 - - 0.770 - - - - - - - transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
38. RGS4 ENSGALG00000002564 201 0.754 - - 0.754 - - - - - - - regulator of G-protein signaling 4 [Source:NCBI gene;Acc:378901]
39. KLHL25 ENSGALG00000006826 2 0.754 - - 0.754 - - - - - - - kelch like family member 25 [Source:HGNC Symbol;Acc:HGNC:25732]
40. gga-mir-6558 ENSGALG00000032123 13 0.739 - - 0.739 - - - - - - - gga-mir-6558 [Source:miRBase;Acc:MI0022376]
41. ENSGALG00000028333 ENSGALG00000028333 54 0.734 - - 0.734 - - - - - - -
42. VSTM2L ENSGALG00000006792 11 0.729 - - 0.729 - - - - - - - V-set and transmembrane domain containing 2 like [Source:HGNC Symbol;Acc:HGNC:16096]
43. GINS3 ENSGALG00000031209 32 0.706 - - 0.706 - - - - - - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA