Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TRIM46

Gene Name Gene ID Reads Annotation
TRIM46 TRIM46 73










Genes with expression patterns similar to TRIM46

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. TRIM46 TRIM46 73 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. TMEM100_1 TMEM100_1 44 2.717 1.000 - - - 0.817 - 0.900 - -
3. CABZ01080599.2 CABZ01080599.2 192 2.467 0.734 - - - - 0.818 0.915 - -
4. CABZ01028287.1 CABZ01028287.1 626 2.387 0.743 - - - - 0.810 0.834 - -
5. SLC35F4 ENSDARG00000103124 55 2.386 0.780 - - - - 0.861 0.745 - - solute carrier family 35, member F4 [Source:ZFIN;Acc:ZDB-GENE-131121-49]
6. syt12 ENSDARG00000101776 215 2.314 0.747 - - - - 0.779 0.788 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
7. skor1b ENSDARG00000062448, ENSDARG00000112341 282 2.284 0.755 - - - - 0.772 0.757 - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
8. nell2b ENSDARG00000062797 854 2.284 0.738 - - - - 0.734 0.812 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
9. BSN_1 BSN_1 21 1.943 1.000 - - - - - 0.943 - -
10. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 1.932 1.000 - - - - 0.932 - - - G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
11. KCNIP4 ENSDARG00000088100 86 1.916 1.000 - - - - - 0.916 - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
12. WNK2 ENSDARG00000104989 429 1.902 0.959 - - - - - 0.943 - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
13. DNER ENSDARG00000061031 123 1.876 1.000 - - - - 0.876 - - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
14. scn1lab ENSDARG00000062744 155 1.87 0.928 - - - - - 0.942 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
15. SLC2A13 SLC2A13 74 1.855 1.000 - - - - - 0.855 - -
16. si:dkey-17e6.2 si:dkey-17e6.2 72 1.852 - - - - - 0.939 0.913 - -
17. GADD45G GADD45G 382 1.846 - - - - - 0.890 0.956 - -
18. zfp64 ENSDARG00000061147 44 1.836 1.000 - - - - - 0.836 - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
19. mir219-3 46 1.826 - - - - 0.877 0.949 - - - microRNA 219-3
20. cdh7 582 1.826 - - - - - 0.943 0.883 - - cadherin 7, type 2, transcript variant X1
21. tfpi2 ENSDARG00000061351, ENSDARG00000115583 61 1.818 0.818 - - - - - 1.000 - - tissue factor pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-38]
22. map6 map6 70 1.815 0.905 - - - - - 0.910 - -
23. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.812 - - - - - 0.843 0.969 - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
24. rhbdl3 ENSDARG00000105190, ENSDARG00000112687, ENSDARG00000116222 977 1.807 - - - - - 0.863 0.944 - - rhomboid, veinlet-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050417-2]
25. cacng8b ENSDARG00000070626 176 1.805 0.950 - - - - - 0.855 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
26. mpz ENSDARG00000038609 1740 1.797 0.852 - - - - - 0.945 - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
27. fam43b ENSDARG00000070222 92 1.793 0.877 - - - - 0.916 - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
28. dync1i1 ENSDARG00000060948 554 1.782 - - - - - 0.806 0.976 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
29. six6a ENSDARG00000025187 40 1.777 1.000 - - - 0.777 - - - - SIX homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040426-1282]
30. kcnj1b ENSDARG00000002666 87 1.776 - - - - - 0.850 0.926 - - potassium inwardly-rectifying channel, subfamily J, member 1b [Source:ZFIN;Acc:ZDB-GENE-070620-9]
31. trim3a ENSDARG00000063711 44 1.775 0.939 - - - - - 0.836 - - tripartite motif containing 3a [Source:ZFIN;Acc:ZDB-GENE-080522-4]
32. chrna2a ENSDARG00000006602 163 1.769 - - - - - 0.790 0.979 - - cholinergic receptor, nicotinic, alpha 2a (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-2]
33. CABZ01087549.1 CABZ01087549.1 108 1.765 - - - - - 0.874 0.891 - -
34. nlgn2b ENSDARG00000079251, ENSDARG00000111576 179 1.758 0.817 - - - - - 0.941 - - neuroligin 2b [Source:ZFIN;Acc:ZDB-GENE-090918-3]
35. LRFN5_1 LRFN5_1 96 1.75 0.882 - - - - - 0.868 - -
36. lrrc4.1 ENSDARG00000069402 323 1.745 0.893 - - - - - 0.852 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
37. plcxd3 ENSDARG00000054794 112 1.741 - - - - - 0.741 1.000 - - phosphatidylinositol-specific phospholipase C, X domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-10]
38. kif3cb ENSDARG00000079500 935 1.741 0.905 - - - - - 0.836 - - kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
39. cdk5r2a ENSDARG00000071011 167 1.741 - - - - - 0.750 0.991 - - cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
40. her4.3 ENSDARG00000070770 613 1.735 - - - - - 0.797 0.938 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
41. si:ch73-389b16.2 ENSDARG00000103802 340 1.733 - - - - - 0.792 0.941 - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
42. im:7162084 im:7162084 665 1.728 - - - - - 0.903 0.825 - -
43. sp5l ENSDARG00000115868 361 1.728 - 0.892 - - - - 0.836 - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
44. TTYH1 ENSDARG00000076804 399 1.726 - 0.862 - - - - 0.864 - - tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
45. fbxo41 ENSDARG00000078908 95 1.725 0.839 - - - - - 0.886 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
46. SLITRK4 ENSDARG00000079781 54 1.715 - - - - - 0.715 1.000 - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
47. AL935272.2 AL935272.2 37 1.713 1.000 - - - - 0.713 - - -
48. ptprnb ENSDARG00000077047 2743 1.712 - - - - - 0.788 0.924 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
49. nhlh2 ENSDARG00000025495 1860 1.711 0.805 - - - - - 0.906 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
50. sult4a1 ENSDARG00000101967 205 1.709 - - - - - 0.791 0.918 - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
51. npas4a ENSDARG00000055752 5 1.708 - - - - 0.872 - 0.836 - - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
52. CABZ01015475.1 ENSDARG00000104841 6 1.708 - - - - 0.872 - 0.836 - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
53. mir124-2 196 1.707 - - - - - 0.829 0.878 - - microRNA 124-2
54. mir219-2 129 1.706 - - - - - 0.844 0.862 - - microRNA 219-2
55. CR391967.1 CR391967.1 135 1.705 0.869 - - - - - 0.836 - -
56. BX248120.1 BX248120.1 4 1.705 1.000 - - 0.705 - - - - -
57. lhx4 ENSDARG00000039458 328 1.701 - - - - - 0.793 0.908 - - LIM homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060728-1]
58. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.7 - - - - - 0.874 0.826 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
59. BEGAIN BEGAIN 39 1.694 - - - 0.858 - - 0.836 - -
60. CR407704.1 CR407704.1 188 1.693 - - - - - 0.712 0.981 - -
61. znf532 ENSDARG00000052894 118 1.69 - 0.927 - - - - 0.763 - - zinc finger protein 532 [Source:ZFIN;Acc:ZDB-GENE-060531-40]
62. agbl4 ENSDARG00000068050, ENSDARG00000110838 201 1.688 0.876 - - - - - 0.812 - - ATP/GTP binding protein-like 4 [Source:ZFIN;Acc:ZDB-GENE-081104-437]
63. si:dkey-258p11.1 si:dkey-258p11.1 48 1.687 0.851 - - - - - 0.836 - -
64. jph3 ENSDARG00000102204 175 1.686 - - - - - 0.736 0.950 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
65. JAKMIP1 ENSDARG00000076090 55 1.682 0.780 - - - - - 0.902 - - janus kinase and microtubule interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-110208-7]
66. gpr22 gpr22 115 1.68 - - - - - 0.781 0.899 - -
67. si:ch211-57m13.9 ENSDARG00000095884 10 1.675 0.839 - - - - - 0.836 - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
68. abhd3 ENSDARG00000018809 168 1.674 - 0.711 - - - - 0.963 - - abhydrolase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040912-90]
69. TENM2_1 ENSDARG00000037122 67 1.674 0.933 - - 0.741 - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
70. ENTHD1 ENTHD1 235 1.67 0.743 - - - - - 0.927 - -
71. chga ENSDARG00000008829 1086 1.67 - - - - - 0.741 0.929 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
72. CR848045.1 CR848045.1 459 1.67 - - - - - 0.767 0.903 - -
73. mfsd2b ENSDARG00000030263 12 1.669 - - - - - 0.833 0.836 - - major facilitator superfamily domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041210-308]
74. BX511121.1 ENSDARG00000029997 1774 1.668 - - - - - 0.811 0.857 - -
75. tmem35 ENSDARG00000052567 5685 1.663 - - - - - 0.805 0.858 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
76. bsk146 ENSDARG00000099069 274 1.661 0.804 - - - - - 0.857 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
77. neurog1 ENSDARG00000056130 3924 1.661 - - - - - 0.800 0.861 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
78. sox19b ENSDARG00000040266 532 1.656 - - - - - 0.825 0.831 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
79. U1_50 U1_50 62 1.656 0.948 - - - 0.708 - - - -
80. gphnb ENSDARG00000100851 118 1.651 0.901 - - - - - 0.750 - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
81. map7d2b ENSDARG00000045316 702 1.65 - - - - - 0.710 0.940 - - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
82. AL935029.1 AL935029.1 514 1.648 - - - - - 0.724 0.924 - -
83. sst1.1 ENSDARG00000040799 677 1.643 - - - - - 0.738 0.905 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
84. chrna2b ENSDARG00000057025 217 1.642 - - - - - 0.908 0.734 - - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
85. gabrg2 ENSDARG00000053665 434 1.641 - - - - - 0.780 0.861 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
86. ptpreb ENSDARG00000021151 739 1.638 - - - - - 0.857 0.781 - - protein tyrosine phosphatase, receptor type, E, b [Source:ZFIN;Acc:ZDB-GENE-060503-263]
87. si:ch73-91k6.8 si:ch73-91k6.8 37 1.634 0.933 - - - - - 0.701 - -
88. zgc:100906 ENSDARG00000033599 344 1.633 0.837 - - - - - 0.796 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
89. tac3a ENSDARG00000093089, ENSDARG00000110723 75 1.633 - - - - - 0.903 0.730 - - tachykinin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-253]
90. ANKRD13D ENSDARG00000098140 88 1.633 - - - - - 0.833 0.800 - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
91. sox21a ENSDARG00000031664, ENSDARG00000111842 1700 1.626 0.800 - - - - 0.826 - - - SRY (sex determining region Y)-box 21a [Source:ZFIN;Acc:ZDB-GENE-990715-6]
92. ADAMTS3 ENSDARG00000060127 2839 1.625 - - - - - 0.719 0.906 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
93. slc18a3a ENSDARG00000006356 1285 1.624 - - - - - 0.749 0.875 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
94. si:dkey-22l11.6 ENSDARG00000070126 27 1.622 - 0.856 - - - 0.766 - - - si:dkey-22l11.6 [Source:ZFIN;Acc:ZDB-GENE-041210-251]
95. pou3f3a ENSDARG00000042032 2835 1.622 - - - - - 0.733 0.889 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
96. hmp19 2554 1.615 0.709 - - - - - 0.906 - - HMP19 protein
97. nrsn1 ENSDARG00000111235 123 1.613 0.855 - - - - - 0.758 - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
98. her2 ENSDARG00000038205 3219 1.612 - - - - - 0.779 0.833 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
99. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.611 - - - - - 0.807 0.804 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
100. gpr186 ENSDARG00000094860 53 1.611 - - - - - 0.881 0.730 - - G protein-coupled receptor 186 [Source:ZFIN;Acc:ZDB-GENE-060503-489]

There are 1459 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA