Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRIM3

Gene Name Gene ID Reads Annotation
TRIM3 ENSGALG00000034004 110 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]











Genes with expression patterns similar to TRIM3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRIM3 ENSGALG00000034004 110 5 - - 1.000 - - 1.000 - 1.000 1.000 1.000 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
2. PDCD4 ENSGALG00000008700 574 1.96 - - - - - - - 1.000 - 0.960 programmed cell death 4 [Source:NCBI gene;Acc:374191]
3. NBN ENSGALG00000037686 648 1.814 - - - - - - - - 0.852 0.962 nibrin [Source:NCBI gene;Acc:374246]
4. ELL2 ENSGALG00000014678 1111 1.768 - - - - - - - - 0.824 0.944 elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
5. MDN1 ENSGALG00000015733 2352 1.667 - - - - - - - - 0.846 0.821 midasin AAA ATPase 1, transcript variant X1
6. RFFL ENSGALG00000002225 928 1.65 - - - - - - - - 0.793 0.857 ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
7. ANKRD50 ENSGALG00000011831 2870 1.623 - - - - - - - - 0.804 0.819 ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
8. WDR36 ENSGALG00000000247 11277 1.616 - - - - - - - - 0.770 0.846 WD repeat domain 36 [Source:NCBI gene;Acc:415609]
9. YBX3 ENSGALG00000031890 819 1.596 - - - - - - - - 0.782 0.814 Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
10. MED17 ENSGALG00000017218 5821 1.574 - - - - - - - - 0.704 0.870 mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
11. LOC421081 ENSGALG00000015106 0 1 - - - - - - - 1.000 - - uncharacterized LOC421081, transcript variant X1
12. MMP11 ENSGALG00000005968 3 1 - - - - - - - 1.000 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
13. SNORA44 SNORA44 29 1 - - - - - - - 1.000 - -
14. RBM15 ENSGALG00000000401 22 1 - - - - - - - 1.000 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
15. ENSGALG00000028298 ENSGALG00000028298 34 1 - - - - - - - 1.000 - -
16. RAI1 ENSGALG00000004888 14 1 - - - - - - - 1.000 - - retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
17. SPIDR SPIDR 19 1 - - - - - - - 1.000 - -
18. FHDC1 ENSGALG00000041054 34 1 - - - - - - - 1.000 - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
19. ADCY1 ENSGALG00000031170 4 1 - - - - - - - 1.000 - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
20. SPG20 22 1 - - - - - - - 1.000 - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
21. MMP27 ENSGALG00000019060 19 1 - - - - - - - 1.000 - - matrix metallopeptidase 27 [Source:NCBI gene;Acc:395850]
22. TIMP4 ENSGALG00000004969 21 1 - - - - - - - 1.000 - - TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
23. CUBN ENSGALG00000008704 21 1 - - - - - - - 1.000 - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
24. RMST RMST 2 1 - - - - - - - 1.000 - -
25. ACKR2 ENSGALG00000005305 0 1 - - - - - - - 1.000 - - atypical chemokine receptor 2 [Source:HGNC Symbol;Acc:HGNC:1565]
26. SMTN 18 1 - - - - - - - 1.000 - - smoothelin, transcript variant X2
27. RBKS ENSGALG00000010043 3 1 - - - - - - - 1.000 - - ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
28. CTRB2 ENSGALG00000000038 6 1 - - - - - - - 1.000 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
29. ADCK3 ADCK3 110 1 - - - - - - - 1.000 - -
30. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - - 1.000 - -
31. TNFRSF13B ENSGALG00000024122 0 1 - - - - - - - 1.000 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
32. HECA ENSGALG00000013824 14 1 - - - - - - - 1.000 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
33. BAFF BAFF 40 1 - - - - - - - 1.000 - -
34. ATXN10 ENSGALG00000014234 16 1 - - - - - - - 1.000 - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
35. CLVS1 ENSGALG00000043172 56 1 - - - - - - - 1.000 - - clavesin 1
36. TMEM204 ENSGALG00000029047 8 1 - - - - - - - 1.000 - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
37. WDR90 ENSGALG00000028172 13 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
38. PEX5 ENSGALG00000014683 17 1 - - - - - - - 1.000 - - peroxisomal biogenesis factor 5 [Source:NCBI gene;Acc:418299]
39. LRP6 ENSGALG00000031503 39 1 - - - - - - - 1.000 - - LDL receptor related protein 6 [Source:HGNC Symbol;Acc:HGNC:6698]
40. SUSD5 ENSGALG00000042289 1 1 - - - - - - - 1.000 - - sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]
41. SLC20A1 ENSGALG00000013740 40 1 - - - - - - - 1.000 - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
42. KNDC1 ENSGALG00000007007 31 1 - - - - - - - 1.000 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
43. SH3GL3 ENSGALG00000006045 12 1 - - - - - - - 1.000 - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
44. PPP1R36 ENSGALG00000040026 24 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
45. SEC16B ENSGALG00000004424 4 1 - - - - - - - 1.000 - - SEC16 homolog B, endoplasmic reticulum export factor [Source:NCBI gene;Acc:424431]
46. CPS1 ENSGALG00000002944 2 1 - - - - - - - 1.000 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
47. LOC395991 ENSGALG00000006944 103 1 - - - - - - - 1.000 - - crescent, transcript variant X1
48. ENSGALG00000028737 ENSGALG00000028737 24 1 - - - - - - - 1.000 - -
49. LAMC1 ENSGALG00000004620 11 1 - - - - - - - 1.000 - - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
50. CCNT2 ENSGALG00000012207 14 1 - - - - - - - 1.000 - - cyclin T2 [Source:HGNC Symbol;Acc:HGNC:1600]
51. DNAH14 ENSGALG00000045078 1 1 - - - - - - - 1.000 - - dynein, axonemal, heavy chain 14
52. CKMT1A ENSGALG00000008352 44 1 - - - - - - - 1.000 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
53. TMSB10 TMSB10 518 1 - - - - - - - 1.000 - -
54. EXOC6B ENSGALG00000016098 3 1 - - - - - - - 1.000 - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
55. CFTII CFTII 6 1 - - - - - - - 1.000 - -
56. LICOS LICOS 13 1 - - - - - - - 1.000 - -
57. GABRG2 ENSGALG00000038042 211 1 - - - - - - - 1.000 - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
58. RBL2 ENSGALG00000003663 10 1 - - - - - - - 1.000 - - RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
59. OTX2 ENSGALG00000034889 8 1 - - - - - - - 1.000 - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
60. KCNK16 ENSGALG00000020049 0 1 - - - - - - - 1.000 - - potassium two pore domain channel subfamily K member 16 [Source:HGNC Symbol;Acc:HGNC:14464]
61. SCG5 ENSGALG00000009725 10 1 - - - - - - - 1.000 - - secretogranin V [Source:NCBI gene;Acc:769742]
62. GLRA2 ENSGALG00000016571 10 1 - - - - - - - 1.000 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
63. ING1 ENSGALG00000016849 89 1 - - - - - - - 1.000 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
64. RGS13 ENSGALG00000026810 8 1 - - - - - - - 1.000 - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
65. ADAMTS8 ENSGALG00000001370 0 1 - - - - - - - 1.000 - - ADAM metallopeptidase with thrombospondin type 1 motif 8 [Source:HGNC Symbol;Acc:HGNC:224]
66. SLC6A11 ENSGALG00000004879 16 1 - - - - - - - 1.000 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
67. COG3 ENSGALG00000016980 15 1 - - - - - - - 1.000 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
68. ADCY7 ENSGALG00000003837 10 1 - - - - - - - 1.000 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
69. ENSGALG00000014605 ENSGALG00000014605 1 1 - - - - - - - 1.000 - -
70. COTL1 ENSGALG00000017644 81 1 - - - - - - - 1.000 - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
71. ENSGALG00000026654 ENSGALG00000026654 10 1 - - - - - - - 1.000 - -
72. ENSGALG00000001345 ENSGALG00000001345 5 1 - - - - - - - 1.000 - -
73. BTG4 ENSGALG00000007618 2 1 - - - - - - - 1.000 - - BTG anti-proliferation factor 4 [Source:NCBI gene;Acc:419781]
74. ENSGALG00000019324 ENSGALG00000019324 0 1 - - - - - - - 1.000 - -
75. SLC6A4 ENSGALG00000004246 5 1 - - - - - - - 1.000 - - solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]
76. HK3 ENSGALG00000027287 20 1 - - - - - - - 1.000 - - hexokinase 3, transcript variant X3
77. BTBD10 ENSGALG00000005369 56 1 - - - - - - - 1.000 - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
78. MYO1D ENSGALG00000000674 14 1 - - - - - - - 1.000 - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
79. CBR4 ENSGALG00000009714 7 1 - - - - - - - 1.000 - - carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
80. ENSGALG00000028964 ENSGALG00000028964 46 1 - - - - - - - 1.000 - -
81. ID3 ENSGALG00000035317 52 1 - - - - - - - 1.000 - - inhibitor of DNA binding 3, HLH protein [Source:NCBI gene;Acc:395281]
82. ZFYVE28 15 1 - - - - - - - 1.000 - - zinc finger FYVE-type containing 28, transcript variant X3
83. RADIL ENSGALG00000004504 0 1 - - - - - - - 1.000 - - Rap associating with DIL domain [Source:HGNC Symbol;Acc:HGNC:22226]
84. WDR52 WDR52 37 1 - - - - - - - 1.000 - -
85. GDPD4 ENSGALG00000000690 824 1 - - - - - - - 1.000 - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
86. ENSGALG00000010218 ENSGALG00000010218 12 1 - - - - - - - 1.000 - -
87. SLC38A10 ENSGALG00000006880 34 1 - - - - - - - 1.000 - - solute carrier family 38 member 10 [Source:HGNC Symbol;Acc:HGNC:28237]
88. RNF17 ENSGALG00000045414 2 1 - - - - - - - 1.000 - - ring finger protein 17, transcript variant X2
89. GGT5 ENSGALG00000040504 24 1 - - - - - - - 1.000 - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
90. LRCH1 ENSGALG00000016990 17 1 - - - - - - - 1.000 - - leucine rich repeats and calponin homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20309]
91. SPINK6 ENSGALG00000032567 3 1 - - - - - - - 1.000 - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
92. ALG12 ENSGALG00000008539 20 1 - - - - - - - 1.000 - - ALG12, alpha-1,6-mannosyltransferase [Source:NCBI gene;Acc:417733]
93. OSBPL3 ENSGALG00000011007 23 1 - - - - - - - 1.000 - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
94. PAPPA ENSGALG00000007079 6 1 - - - - - - - 1.000 - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
95. SLC6A6 ENSGALG00000006425 31 1 - - - - - - - 1.000 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
96. BRI3BP ENSGALG00000002913 3 1 - - - - - - - 1.000 - - BRI3 binding protein [Source:NCBI gene;Acc:416812]
97. PHC2 62 1 - - - - - - - 1.000 - - polyhomeotic homolog 2
98. DDTNFR23 ENSGALG00000006407 4 1 - - - - - - - 1.000 - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
99. gga-mir-218-1 ENSGALG00000018327 3 1 - - - - - - - 1.000 - - gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
100. NLGN4 NLGN4 283 1 - - - - - - - 1.000 - -

There are 777 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA