Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRIM29

Gene Name Gene ID Reads Annotation
TRIM29 ENSGALG00000042360 34 tripartite motif containing 29 [Source:HGNC Symbol;Acc:HGNC:17274]











Genes with expression patterns similar to TRIM29

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRIM29 ENSGALG00000042360 34 6 - - 1.000 1.000 1.000 1.000 1.000 - - 1.000 tripartite motif containing 29 [Source:HGNC Symbol;Acc:HGNC:17274]
2. SYT8 ENSGALG00000006602 369 1.678 - - 0.844 - 0.834 - - - - - synaptotagmin 8 [Source:HGNC Symbol;Acc:HGNC:19264]
3. TMEM62 ENSGALG00000009260 1170 1.58 - - - 0.737 0.843 - - - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
4. KCNJ15 ENSGALG00000016055 66 1.546 - - 0.841 0.705 - - - - - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
5. ZC2HC1A ENSGALG00000035932 17 1 - - - - - - - - - 1.000 zinc finger C2HC-type containing 1A [Source:HGNC Symbol;Acc:HGNC:24277]
6. IDNK ENSGALG00000012583 3 1 - - - - - 1.000 - - - - IDNK, gluconokinase [Source:HGNC Symbol;Acc:HGNC:31367]
7. Vault Vault 5 1 - - - - - 1.000 - - - -
8. PROM1L ENSGALG00000007645 9 1 - - - - - 1.000 - - - - prominin 1-like
9. SDCBP2 ENSGALG00000028347 1 1 - - - - - 1.000 - - - - syndecan binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15756]
10. CDYL2 ENSGALG00000012978 6 1 - - - - - 1.000 - - - - chromodomain Y like 2 [Source:HGNC Symbol;Acc:HGNC:23030]
11. SLC6A5 ENSGALG00000003908 3 1 - - - - - 1.000 - - - - solute carrier family 6 member 5 [Source:HGNC Symbol;Acc:HGNC:11051]
12. gga-mir-1801 ENSGALG00000025241 13 1 - - - - - 1.000 - - - - gga-mir-1801 [Source:miRBase;Acc:MI0007545]
13. FLT4 ENSGALG00000005802 5 1 - - - - - 1.000 - - - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
14. ALDH1A1 ENSGALG00000015147 3 1 - - - - - 1.000 - - - - aldehyde dehydrogenase 1 family member A1 [Source:NCBI gene;Acc:395264]
15. ENSGALG00000011926 ENSGALG00000011926 6 1 - - - - - 1.000 - - - -
16. DNTT ENSGALG00000006983 2 1 - - - - - 1.000 - - - - DNA nucleotidylexotransferase [Source:NCBI gene;Acc:396351]
17. ENSGALG00000001552 ENSGALG00000001552 4 1 - - - - - 1.000 - - - -
18. GPRIN2 ENSGALG00000002048 17 1 - - - - - 1.000 - - - - G protein regulated inducer of neurite outgrowth 2 [Source:NCBI gene;Acc:395648]
19. CDH6 ENSGALG00000012917 17 1 - - - - - 1.000 - - - - cadherin 6 [Source:NCBI gene;Acc:414842]
20. XKRX ENSGALG00000006637 13 1 - - - - - 1.000 - - - - XK related, X-linked, transcript variant X4
21. SNORD93 SNORD93 20 1 - - - - - 1.000 - - - -
22. MUC5B MUC5B 62 0.983 - - - - - 0.983 - - - -
23. SGMS2 ENSGALG00000010535 42 0.975 - - 0.975 - - - - - - - sphingomyelin synthase 2 [Source:NCBI gene;Acc:422529]
24. RAB3C ENSGALG00000014726 10 0.975 - - 0.975 - - - - - - - RAB3C, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30269]
25. TEX33 ENSGALG00000012490 11 0.975 - - 0.975 - - - - - - - testis expressed 33, transcript variant X2
26. LOC771308 ENSGALG00000000274 7 0.975 - - 0.975 - - - - - - - growth hormone releasing hormone receptor, transcript variant X2
27. ATMIN ENSGALG00000040475 16 0.975 - - 0.975 - - - - - - - ATM interactor [Source:HGNC Symbol;Acc:HGNC:29034]
28. MMR1L2 ENSGALG00000028357 7 0.975 - - 0.975 - - - - - - - Gallus gallus macrophage mannose receptor 1-like 2 (MMR1L2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319010]
29. OSGIN1 ENSGALG00000003323 7 0.975 - - 0.975 - - - - - - - oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]
30. AOX1 ENSGALG00000008185 14 0.975 - - 0.975 - - - - - - - aldehyde oxidase 1 [Source:NCBI gene;Acc:424071]
31. ADCYAP1 ENSGALG00000014858 9 0.975 - - 0.975 - - - - - - - adenylate cyclase activating polypeptide 1 [Source:NCBI gene;Acc:408251]
32. FAR-2 FAR-2 24 0.974 - - 0.974 - - - - - - -
33. ELFN2 ENSGALG00000012446 11 0.972 - - 0.972 - - - - - - - extracellular leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29396]
34. CLDN15 ENSGALG00000038964 21 0.972 - - 0.972 - - - - - - - claudin 15, transcript variant X4
35. ENSGALG00000004951 ENSGALG00000004951 18 0.971 - - 0.971 - - - - - - -
36. FGF7 ENSGALG00000028158 189 0.968 - - 0.968 - - - - - - - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
37. PTPRE ENSGALG00000009823 250 0.967 - - 0.967 - - - - - - - protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
38. BLNK ENSGALG00000006973 85 0.963 - - - - - 0.963 - - - - B cell linker [Source:NCBI gene;Acc:395733]
39. SCG2 ENSGALG00000029819 26 0.963 - - 0.963 - - - - - - - secretogranin II [Source:HGNC Symbol;Acc:HGNC:10575]
40. ENSGALG00000026496 ENSGALG00000026496 9 0.962 - - 0.962 - - - - - - -
41. SLC38A9 ENSGALG00000014712 16 0.96 - - 0.960 - - - - - - - solute carrier family 38 member 9 [Source:HGNC Symbol;Acc:HGNC:26907]
42. ADAMTS12 55 0.955 - - 0.955 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
43. CNFI-A4 CNFI-A4 128 0.955 - - - - - 0.955 - - - -
44. SLC4A10 ENSGALG00000030032 56 0.954 - - 0.954 - - - - - - - solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]
45. FASTK ENSGALG00000033058 21 0.953 - - 0.953 - - - - - - - Fas activated serine/threonine kinase
46. CYLD ENSGALG00000003753 11 0.953 - - - - - 0.953 - - - - CYLD lysine 63 deubiquitinase [Source:HGNC Symbol;Acc:HGNC:2584]
47. LOC112532477 ENSGALG00000027520 40 0.951 - - - - - 0.951 - - - - fibrinogen-like protein 1-like protein
48. NPDC1 ENSGALG00000042635 12 0.951 - - - - 0.951 - - - - - neural proliferation, differentiation and control 1 [Source:HGNC Symbol;Acc:HGNC:7899]
49. FEM1C ENSGALG00000008204 9 0.951 - - - - 0.951 - - - - - fem-1 homolog C [Source:HGNC Symbol;Acc:HGNC:16933]
50. NRP2 ENSGALG00000008621 29 0.951 - - - - 0.951 - - - - - neuropilin 2 [Source:NCBI gene;Acc:374157]
51. IL2RB ENSGALG00000012472 7 0.951 - - - - 0.951 - - - - - Gallus gallus interleukin 2 receptor subunit beta (IL2RB), mRNA. [Source:RefSeq mRNA;Acc:NM_001318989]
52. SK2 SK2 74 0.951 - - 0.951 - - - - - - -
53. PTPRF ENSGALG00000010053 27 0.949 - - 0.949 - - - - - - - protein tyrosine phosphatase, receptor type F [Source:HGNC Symbol;Acc:HGNC:9670]
54. S100A13 ENSGALG00000046614 201 0.949 - - 0.949 - - - - - - - S100 calcium binding protein A13 [Source:HGNC Symbol;Acc:HGNC:10490]
55. MAN1B1 ENSGALG00000037375 308 0.949 - - 0.949 - - - - - - - mannosidase alpha class 1B member 1 [Source:HGNC Symbol;Acc:HGNC:6823]
56. PCNXL4 PCNXL4 58 0.946 - - - - - 0.946 - - - -
57. ADMP ENSGALG00000037408 24 0.944 - - - - - 0.944 - - - - anti-dorsalizing morphogenetic protein [Source:NCBI gene;Acc:395622]
58. TMEM231 ENSGALG00000003219 53 0.943 - - - - - 0.943 - - - - transmembrane protein 231 [Source:NCBI gene;Acc:425108]
59. MAP3K21 ENSGALG00000011008 54 0.943 - - 0.943 - - - - - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
60. C1QB ENSGALG00000004771 368 0.941 - - - - - - - - - 0.941 complement C1q B chain [Source:HGNC Symbol;Acc:HGNC:1242]
61. CYP24A1 ENSGALG00000042279 43 0.94 - - - - - 0.940 - - - - cytochrome P450 family 24 subfamily A member 1 [Source:NCBI gene;Acc:395827]
62. XK ENSGALG00000016262 60 0.938 - - 0.938 - - - - - - - X-linked Kx blood group [Source:NCBI gene;Acc:427991]
63. PARK2 166 0.936 - - 0.936 - - - - - - - parkin RBR E3 ubiquitin protein ligase
64. ENSGALG00000024048 ENSGALG00000024048 50 0.936 - - 0.936 - - - - - - -
65. ACOX2 ENSGALG00000007132 47 0.934 - - - - 0.934 - - - - - acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]
66. CD44 ENSGALG00000039080 100 0.93 - - 0.930 - - - - - - - CD44 molecule (Indian blood group) [Source:NCBI gene;Acc:395666]
67. PDE6G ENSGALG00000004514 231 0.928 - - 0.928 - - - - - - - phosphodiesterase 6G [Source:NCBI gene;Acc:395091]
68. PAFAH2 ENSGALG00000021658 68 0.928 - - - - - 0.928 - - - - platelet activating factor acetylhydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8579]
69. METTL15 ENSGALG00000012153 233 0.928 - - - - - 0.928 - - - - methyltransferase like 15 [Source:NCBI gene;Acc:421606]
70. TMEM206 ENSGALG00000009822 80 0.926 - - 0.926 - - - - - - - transmembrane protein 206 [Source:HGNC Symbol;Acc:HGNC:25593]
71. CC2D1B ENSGALG00000010619 66 0.922 - - 0.922 - - - - - - - coiled-coil and C2 domain containing 1B [Source:HGNC Symbol;Acc:HGNC:29386]
72. MPP2 ENSGALG00000035580 383 0.918 - - - - - 0.918 - - - - membrane palmitoylated protein 2 [Source:HGNC Symbol;Acc:HGNC:7220]
73. ENSGALG00000006003 ENSGALG00000006003 11 0.916 - - - - 0.916 - - - - -
74. GRXCR1 ENSGALG00000023032 4 0.911 - - - - - 0.911 - - - - glutaredoxin and cysteine rich domain containing 1 [Source:HGNC Symbol;Acc:HGNC:31673]
75. SEH1L ENSGALG00000013872 315 0.91 - - 0.910 - - - - - - - SEH1 like nucleoporin [Source:HGNC Symbol;Acc:HGNC:30379]
76. C16orf72 ENSGALG00000007291 228 0.908 - - 0.908 - - - - - - - chromosome 16 open reading frame 72 [Source:HGNC Symbol;Acc:HGNC:30103]
77. ACYP1 ENSGALG00000010307 3115 0.907 - - - - - 0.907 - - - - acylphosphatase 1 [Source:NCBI gene;Acc:423361]
78. AMH ENSGALG00000036346 16 0.906 - - - - 0.906 - - - - - anti-Mullerian hormone [Source:NCBI gene;Acc:395887]
79. TADA2B ENSGALG00000015547 55 0.902 - - 0.902 - - - - - - - transcriptional adaptor 2B [Source:HGNC Symbol;Acc:HGNC:30781]
80. SERPINC1 ENSGALG00000004591 68 0.902 - - - - - - 0.902 - - - Gallus gallus serpin family C member 1 (SERPINC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001353945]
81. RNASEL ENSGALG00000042986 460 0.9 - - 0.900 - - - - - - - ribonuclease L [Source:NCBI gene;Acc:424410]
82. GPR20 ENSGALG00000041730 1926 0.9 - - 0.900 - - - - - - - G protein-coupled receptor 20 [Source:HGNC Symbol;Acc:HGNC:4475]
83. ALOX5 ENSGALG00000005857 73 0.897 - - 0.897 - - - - - - - arachidonate 5-lipoxygenase [Source:HGNC Symbol;Acc:HGNC:435]
84. SLC17A8 ENSGALG00000041122 57 0.894 - - 0.894 - - - - - - - Gallus gallus solute carrier family 17 member 8 (SLC17A8), mRNA. [Source:RefSeq mRNA;Acc:NM_001319029]
85. GDAP2 ENSGALG00000014794 523 0.892 - - 0.892 - - - - - - - ganglioside induced differentiation associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18010]
86. PQLC3 ENSGALG00000016449 39 0.891 - - 0.891 - - - - - - - PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
87. TMEM198 ENSGALG00000018803 17 0.891 - - - - - 0.891 - - - - transmembrane protein 198 [Source:HGNC Symbol;Acc:HGNC:33704]
88. MAP3K3 ENSGALG00000000525 115 0.891 - - - - - 0.891 - - - - mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
89. LRRC52 ENSGALG00000003443 20 0.89 - - - - - 0.890 - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
90. HACL1 ENSGALG00000011211 51 0.889 - - - - 0.889 - - - - - 2-hydroxyacyl-CoA lyase 1 [Source:NCBI gene;Acc:420638]
91. RNF216 ENSGALG00000004629 84 0.887 - - 0.887 - - - - - - - ring finger protein 216 [Source:HGNC Symbol;Acc:HGNC:21698]
92. MTOR ENSGALG00000003339 328 0.886 - - 0.886 - - - - - - - mechanistic target of rapamycin kinase [Source:HGNC Symbol;Acc:HGNC:3942]
93. UNC13C ENSGALG00000035935 120 0.885 - - - - 0.885 - - - - - unc-13 homolog C [Source:HGNC Symbol;Acc:HGNC:23149]
94. CPPED1 ENSGALG00000040854 202 0.885 - - 0.885 - - - - - - - calcineurin like phosphoesterase domain containing 1 [Source:NCBI gene;Acc:416418]
95. FAM104A ENSGALG00000026401 162 0.884 - - 0.884 - - - - - - - family with sequence similarity 104 member A [Source:NCBI gene;Acc:417450]
96. ENSGALG00000019522 ENSGALG00000019522 122 0.883 - - 0.883 - - - - - - -
97. SNORD73 SNORD73 113 0.883 - - - - 0.883 - - - - -
98. JADE3 ENSGALG00000016727 55 0.882 - - 0.882 - - - - - - - jade family PHD finger 3 [Source:HGNC Symbol;Acc:HGNC:22982]
99. FAM161A ENSGALG00000008810 36 0.882 - - - - - 0.882 - - - - FAM161A, centrosomal protein [Source:HGNC Symbol;Acc:HGNC:25808]
100. GRB10 ENSGALG00000013100 37 0.876 - - 0.876 - - - - - - - growth factor receptor bound protein 10 [Source:NCBI gene;Acc:420948]

There are 245 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA