Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRIM28

Gene Name Gene ID Reads Annotation
TRIM28 ENSG00000130726 33518 tripartite motif containing 28 [Source:HGNC Symbol;Acc:HGNC:16384]



Genes with expression patterns similar to TRIM28

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. TRIM28 ENSG00000130726 33518 2 1.000 1.000 tripartite motif containing 28 [Source:HGNC Symbol;Acc:HGNC:16384]
2. DNMT1 ENSG00000130816 23001 0.875 - 0.875 DNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]
3. KHSRP ENSG00000088247 13538 0.872 - 0.872 KH-type splicing regulatory protein [Source:HGNC Symbol;Acc:HGNC:6316]
4. EHMT2 ENSG00000204371, ENSG00000206376, ENSG00000224143, ENSG00000227333, ENSG00000232045, ENSG00000236759, ENSG00000238134 6990 0.86 - 0.860 euchromatic histone lysine methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:14129]
5. UBA1 ENSG00000130985 20298 0.854 - 0.854 ubiquitin like modifier activating enzyme 1 [Source:HGNC Symbol;Acc:HGNC:12469]
6. STRN4 ENSG00000090372 7212 0.85 - 0.850 striatin 4 [Source:HGNC Symbol;Acc:HGNC:15721]
7. SF3B3 ENSG00000189091 8156 0.847 - 0.847 splicing factor 3b subunit 3 [Source:HGNC Symbol;Acc:HGNC:10770]
8. HSP90AB1 ENSG00000096384 183977 0.845 - 0.845 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
9. U2AF2 ENSG00000063244 19476 0.844 - 0.844 U2 small nuclear RNA auxiliary factor 2 [Source:HGNC Symbol;Acc:HGNC:23156]
10. MED24 ENSG00000008838 7251 0.841 - 0.841 mediator complex subunit 24 [Source:HGNC Symbol;Acc:HGNC:22963]
11. HCFC1 ENSG00000172534 21012 0.838 - 0.838 host cell factor C1 [Source:HGNC Symbol;Acc:HGNC:4839]
12. SNRNP70 ENSG00000104852 14118 0.838 - 0.838 small nuclear ribonucleoprotein U1 subunit 70 [Source:HGNC Symbol;Acc:HGNC:11150]
13. MLF2 ENSG00000089693 18042 0.835 - 0.835 myeloid leukemia factor 2 [Source:HGNC Symbol;Acc:HGNC:7126]
14. HDGF ENSG00000143321 18626 0.83 - 0.830 heparin binding growth factor [Source:HGNC Symbol;Acc:HGNC:4856]
15. USP11 ENSG00000102226 8177 0.825 - 0.825 ubiquitin specific peptidase 11 [Source:HGNC Symbol;Acc:HGNC:12609]
16. PSME3 ENSG00000131467 10433 0.825 - 0.825 proteasome activator subunit 3 [Source:HGNC Symbol;Acc:HGNC:9570]
17. USP22 ENSG00000124422 49599 0.825 - 0.825 ubiquitin specific peptidase 22 [Source:HGNC Symbol;Acc:HGNC:12621]
18. EEF2 ENSG00000167658 47680 0.824 - 0.824 eukaryotic translation elongation factor 2 [Source:HGNC Symbol;Acc:HGNC:3214]
19. POLR2E ENSG00000099817 7529 0.823 - 0.823 RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
20. DCTN1 ENSG00000204843 19815 0.82 - 0.820 dynactin subunit 1 [Source:HGNC Symbol;Acc:HGNC:2711]
21. CTDNEP1 ENSG00000175826 15483 0.819 - 0.819 CTD nuclear envelope phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:19085]
22. ATP5SL 25967 0.819 - 0.819 ATP5S like, transcript variant X1
23. FSCN1 ENSG00000075618 34169 0.818 - 0.818 fascin actin-bundling protein 1 [Source:HGNC Symbol;Acc:HGNC:11148]
24. SMARCA4 ENSG00000127616 21398 0.818 - 0.818 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
25. SRRT ENSG00000087087 9730 0.816 - 0.816 serrate, RNA effector molecule [Source:HGNC Symbol;Acc:HGNC:24101]
26. CIZ1 ENSG00000148337 3149 0.815 - 0.815 CDKN1A interacting zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:16744]
27. SNRPA ENSG00000077312 4577 0.815 - 0.815 small nuclear ribonucleoprotein polypeptide A [Source:HGNC Symbol;Acc:HGNC:11151]
28. USP5 ENSG00000111667 2579 0.815 - 0.815 ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
29. PELP1 ENSG00000141456 2409 0.815 - 0.815 proline, glutamate and leucine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:30134]
30. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 314035 0.815 - 0.815 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
31. HNRNPUL1 ENSG00000105323 23988 0.814 - 0.814 heterogeneous nuclear ribonucleoprotein U like 1 [Source:HGNC Symbol;Acc:HGNC:17011]
32. SF1 ENSG00000168066 32785 0.814 - 0.814 splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:12950]
33. TAF6 ENSG00000106290 8475 0.811 - 0.811 TATA-box binding protein associated factor 6 [Source:HGNC Symbol;Acc:HGNC:11540]
34. MARCKSL1 ENSG00000175130 73054 0.81 - 0.810 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
35. PKM ENSG00000067225 58854 0.81 - 0.810 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
36. CDK16 ENSG00000102225 4372 0.81 - 0.810 cyclin dependent kinase 16 [Source:HGNC Symbol;Acc:HGNC:8749]
37. AURKB ENSG00000178999 25157 0.809 - 0.809 aurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]
38. FUS ENSG00000089280 23952 0.809 - 0.809 FUS RNA binding protein [Source:HGNC Symbol;Acc:HGNC:4010]
39. PMF1 ENSG00000160783 12298 0.807 - 0.807 polyamine modulated factor 1 [Source:HGNC Symbol;Acc:HGNC:9112]
40. XPO6 ENSG00000169180 5152 0.806 - 0.806 exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
41. TUBA1C ENSG00000167553 11023 0.805 - 0.805 tubulin alpha 1c [Source:HGNC Symbol;Acc:HGNC:20768]
42. DBN1 ENSG00000113758 12842 0.803 - 0.803 drebrin 1 [Source:HGNC Symbol;Acc:HGNC:2695]
43. SAFB ENSG00000160633 7035 0.803 - 0.803 scaffold attachment factor B [Source:HGNC Symbol;Acc:HGNC:10520]
44. SRM ENSG00000116649 8533 0.8 - 0.800 spermidine synthase [Source:HGNC Symbol;Acc:HGNC:11296]
45. TTI1 ENSG00000101407 4394 0.799 - 0.799 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
46. OTUB1 ENSG00000167770 22747 0.797 - 0.797 OTU deubiquitinase, ubiquitin aldehyde binding 1 [Source:HGNC Symbol;Acc:HGNC:23077]
47. SKI ENSG00000157933 7837 0.796 - 0.796 SKI proto-oncogene [Source:HGNC Symbol;Acc:HGNC:10896]
48. PDAP1 ENSG00000106244 8971 0.796 - 0.796 PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
49. FOXRED2 ENSG00000100350 5176 0.792 - 0.792 FAD dependent oxidoreductase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26264]
50. CSK ENSG00000103653 5441 0.791 - 0.791 C-terminal Src kinase [Source:HGNC Symbol;Acc:HGNC:2444]
51. FASN ENSG00000169710 19582 0.79 - 0.790 fatty acid synthase [Source:HGNC Symbol;Acc:HGNC:3594]
52. CBS ENSG00000160200 15678 0.789 - 0.789 cystathionine-beta-synthase [Source:HGNC Symbol;Acc:HGNC:1550]
53. GIGYF1 ENSG00000146830 2356 0.788 - 0.788 GRB10 interacting GYF protein 1 [Source:HGNC Symbol;Acc:HGNC:9126]
54. PLK1 ENSG00000166851 4839 0.787 - 0.787 polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]
55. H1FX ENSG00000184897 16213 0.786 - 0.786 H1 histone family member X [Source:HGNC Symbol;Acc:HGNC:4722]
56. PRKCSH ENSG00000130175 2117 0.786 - 0.786 protein kinase C substrate 80K-H [Source:HGNC Symbol;Acc:HGNC:9411]
57. TERF2 ENSG00000132604 14503 0.784 - 0.784 telomeric repeat binding factor 2 [Source:HGNC Symbol;Acc:HGNC:11729]
58. ASF1B ENSG00000105011 6283 0.782 - 0.782 anti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]
59. SLC25A39 ENSG00000013306 12058 0.782 - 0.782 solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
60. ALG3 ENSG00000214160 8221 0.78 - 0.780 ALG3, alpha-1,3- mannosyltransferase [Source:HGNC Symbol;Acc:HGNC:23056]
61. EIF2AK1 ENSG00000086232 14202 0.78 - 0.780 eukaryotic translation initiation factor 2 alpha kinase 1 [Source:HGNC Symbol;Acc:HGNC:24921]
62. GPS2 ENSG00000132522 22685 0.78 - 0.780 G protein pathway suppressor 2 [Source:HGNC Symbol;Acc:HGNC:4550]
63. CS ENSG00000062485 8243 0.78 - 0.780 citrate synthase [Source:HGNC Symbol;Acc:HGNC:2422]
64. UBE2C ENSG00000175063 19631 0.777 - 0.777 ubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]
65. TAF15 ENSG00000270647, ENSG00000276833 10005 0.776 - 0.776 TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
66. TROAP ENSG00000135451 5590 0.776 - 0.776 trophinin associated protein [Source:HGNC Symbol;Acc:HGNC:12327]
67. NRM ENSG00000137404, ENSG00000206484, ENSG00000228854, ENSG00000228867, ENSG00000234809, ENSG00000235773, ENSG00000236843 7767 0.775 - 0.775 nurim [Source:HGNC Symbol;Acc:HGNC:8003]
68. PSMC4 ENSG00000013275, ENSG00000281221 6978 0.775 - 0.775 proteasome 26S subunit, ATPase 4 [Source:HGNC Symbol;Acc:HGNC:9551]
69. PA2G4 ENSG00000170515 8098 0.774 - 0.774 proliferation-associated 2G4 [Source:HGNC Symbol;Acc:HGNC:8550]
70. CDCA4 ENSG00000170779 11879 0.774 - 0.774 cell division cycle associated 4 [Source:HGNC Symbol;Acc:HGNC:14625]
71. EIF5A ENSG00000132507 27570 0.774 - 0.774 eukaryotic translation initiation factor 5A [Source:HGNC Symbol;Acc:HGNC:3300]
72. SRSF2 ENSG00000161547 77112 0.773 - 0.773 serine and arginine rich splicing factor 2 [Source:HGNC Symbol;Acc:HGNC:10783]
73. BAHCC1 ENSG00000266074 3120 0.772 - 0.772 BAH domain and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29279]
74. ACTR1A ENSG00000138107 7033 0.771 - 0.771 ARP1 actin related protein 1 homolog A [Source:HGNC Symbol;Acc:HGNC:167]
75. PSMF1 ENSG00000125818 7090 0.771 - 0.771 proteasome inhibitor subunit 1 [Source:HGNC Symbol;Acc:HGNC:9571]
76. PIK3R2 ENSG00000105647 8036 0.771 - 0.771 phosphoinositide-3-kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:8980]
77. PPME1 ENSG00000214517 4946 0.77 - 0.770 protein phosphatase methylesterase 1 [Source:HGNC Symbol;Acc:HGNC:30178]
78. SLC25A1 ENSG00000100075 6981 0.77 - 0.770 solute carrier family 25 member 1 [Source:HGNC Symbol;Acc:HGNC:10979]
79. ATP6V0C ENSG00000185883 26903 0.769 - 0.769 ATPase H+ transporting V0 subunit c [Source:HGNC Symbol;Acc:HGNC:855]
80. NCAPH2 ENSG00000025770 5066 0.769 - 0.769 non-SMC condensin II complex subunit H2 [Source:HGNC Symbol;Acc:HGNC:25071]
81. ENO1 ENSG00000074800 57728 0.767 - 0.767 enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]
82. EPN1 ENSG00000063245 5192 0.767 - 0.767 epsin 1 [Source:HGNC Symbol;Acc:HGNC:21604]
83. CFL1 ENSG00000172757 100783 0.767 - 0.767 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
84. TUBA1B ENSG00000123416 396924 0.765 - 0.765 tubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
85. ARHGDIA ENSG00000141522 3661 0.765 - 0.765 Rho GDP dissociation inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:678]
86. TRAP1 ENSG00000126602 7214 0.765 - 0.765 TNF receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16264]
87. CPSF7 ENSG00000149532 16261 0.765 - 0.765 cleavage and polyadenylation specific factor 7 [Source:HGNC Symbol;Acc:HGNC:30098]
88. SF3B2 ENSG00000087365 6044 0.764 - 0.764 splicing factor 3b subunit 2 [Source:HGNC Symbol;Acc:HGNC:10769]
89. MAF1 ENSG00000179632 4345 0.763 - 0.763 MAF1 homolog, negative regulator of RNA polymerase III [Source:HGNC Symbol;Acc:HGNC:24966]
90. TBCB ENSG00000105254 27421 0.761 - 0.761 tubulin folding cofactor B [Source:HGNC Symbol;Acc:HGNC:1989]
91. MCM5 ENSG00000100297 8452 0.76 - 0.760 minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]
92. FKBP1A ENSG00000088832 16905 0.76 - 0.760 FK506 binding protein 1A [Source:HGNC Symbol;Acc:HGNC:3711]
93. CAPNS1 ENSG00000126247 60832 0.759 - 0.759 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
94. PPP2R1A ENSG00000105568 13029 0.758 - 0.758 protein phosphatase 2 scaffold subunit Aalpha [Source:HGNC Symbol;Acc:HGNC:9302]
95. CDK2AP2 ENSG00000167797 5955 0.757 - 0.757 cyclin dependent kinase 2 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:30833]
96. SIX5 ENSG00000177045 8285 0.757 - 0.757 SIX homeobox 5 [Source:HGNC Symbol;Acc:HGNC:10891]
97. CSNK2B ENSG00000204435, ENSG00000206406, ENSG00000224398, ENSG00000224774, ENSG00000228875, ENSG00000230700, ENSG00000232960 15233 0.757 - 0.757 casein kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:2460]
98. TACC3 ENSG00000013810 8753 0.756 - 0.756 transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]
99. GPS1 ENSG00000169727 2907 0.756 - 0.756 G protein pathway suppressor 1 [Source:HGNC Symbol;Acc:HGNC:4549]
100. ARF3 ENSG00000134287 6922 0.756 - 0.756 ADP ribosylation factor 3 [Source:HGNC Symbol;Acc:HGNC:654]

There are 122 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA