Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRIM23

Gene Name Gene ID Reads Annotation
TRIM23 ENSGALG00000014765 612 tripartite motif containing 23 [Source:HGNC Symbol;Acc:HGNC:660]











Genes with expression patterns similar to TRIM23

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRIM23 ENSGALG00000014765 612 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 tripartite motif containing 23 [Source:HGNC Symbol;Acc:HGNC:660]
2. HEATR3 ENSGALG00000041613 2704 0.806 - - - - - - 0.806 - - - HEAT repeat containing 3 [Source:NCBI gene;Acc:415734]
3. VAC14 ENSGALG00000002458 2887 0.79 - - - - - - - - - 0.790 Vac14, PIKFYVE complex component [Source:NCBI gene;Acc:415678]
4. CKLF ENSGALG00000005254 3365 0.78 - - - - - - - - - 0.780 chemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]
5. ACOX1 ENSGALG00000002159 2953 0.778 - - - - - - 0.778 - - - acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
6. CHUK ENSGALG00000003289 5698 0.778 - - - - - - 0.778 - - - conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
7. SNAP47 ENSGALG00000005412 1487 0.773 - - - - - - 0.773 - - - synaptosome associated protein 47 [Source:HGNC Symbol;Acc:HGNC:30669]
8. C12H3ORF19 C12H3ORF19 1278 0.772 - - - - - - 0.772 - - -
9. TULP3 ENSGALG00000013424 2064 0.771 - - - - - - 0.771 - - - tubby like protein 3 [Source:HGNC Symbol;Acc:HGNC:12425]
10. LMO1 ENSGALG00000035679 2190 0.769 - - - - - - - - - 0.769 LIM domain only 1 [Source:HGNC Symbol;Acc:HGNC:6641]
11. RPAP2 ENSGALG00000005953 2085 0.763 - - - - - - 0.763 - - - RNA polymerase II associated protein 2 [Source:HGNC Symbol;Acc:HGNC:25791]
12. HIST1H111R ENSGALG00000011783 1513 0.758 - - - - - - - - - 0.758 histone cluster 1, H1.11R [Source:NCBI gene;Acc:427896]
13. FAM192A ENSGALG00000021473 10213 0.756 - - - - - - - - - 0.756 family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
14. METTL5 ENSGALG00000009676 3252 0.75 - - - - - - 0.750 - - - methyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:25006]
15. LPAR4 ENSGALG00000004121 2543 0.747 - - - - - - 0.747 - - - lysophosphatidic acid receptor 4 [Source:NCBI gene;Acc:422149]
16. N4BP2 ENSGALG00000014281 3144 0.746 - - - - - - 0.746 - - - NEDD4 binding protein 2, transcript variant X6
17. GPR27 ENSGALG00000027091 8111 0.746 - - - - - - 0.746 - - - G protein-coupled receptor 27
18. SNRNP25 ENSGALG00000026559 2097 0.746 - - - - - - 0.746 - - - small nuclear ribonucleoprotein U11/U12 subunit 25 [Source:HGNC Symbol;Acc:HGNC:14161]
19. PAOX ENSGALG00000003557 1728 0.745 - - - - - - - - - 0.745 polyamine oxidase [Source:HGNC Symbol;Acc:HGNC:20837]
20. RBM26 ENSGALG00000016910 13769 0.743 - - - - - - - - - 0.743 RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
21. GRAMD1C ENSGALG00000035629 2494 0.741 - - - - - - 0.741 - - - GRAM domain containing 1C [Source:HGNC Symbol;Acc:HGNC:25252]
22. CCDC93 ENSGALG00000012129 2405 0.74 - - - - - - 0.740 - - - coiled-coil domain containing 93 [Source:NCBI gene;Acc:424277]
23. USP45 ENSGALG00000015478 3101 0.739 - - - - - - 0.739 - - - ubiquitin specific peptidase 45 [Source:NCBI gene;Acc:421793]
24. BANP ENSGALG00000005872 994 0.738 - - - - - - - 0.738 - - BTG3 associated nuclear protein [Source:NCBI gene;Acc:415834]
25. CCDC109B CCDC109B 3222 0.737 - - - - - - 0.737 - - -
26. DBI ENSGALG00000012112 6910 0.736 - - - - - - 0.736 - - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
27. KCNB1 ENSGALG00000004758 620 0.735 - - - - - - - - - 0.735 potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
28. NDUFB1 ENSGALG00000028537 2059 0.735 - - - - - - 0.735 - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
29. ELF1 ENSGALG00000016947 2769 0.734 - - - - - - 0.734 - - - E74 like ETS transcription factor 1 [Source:NCBI gene;Acc:418828]
30. TMED2 ENSGALG00000003307 20704 0.734 - - - - - - 0.734 - - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
31. ANAPC10 ENSGALG00000028643 1376 0.729 - - - - - - 0.729 - - - anaphase promoting complex subunit 10 [Source:NCBI gene;Acc:422461]
32. UQCRH ENSGALG00000017380 55734 0.729 - - - - - - 0.729 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
33. GLI2 ENSGALG00000011630 3347 0.729 - - - - - - 0.729 - - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
34. TSTD1 TSTD1 3613 0.725 - - - - - - - - - 0.725
35. C16orf59 C16orf59 1511 0.725 - - - - - - - - - 0.725
36. DAGLB ENSGALG00000007119 1224 0.722 - - - - - - - - - 0.722 diacylglycerol lipase beta [Source:NCBI gene;Acc:416625]
37. CEP120 ENSGALG00000005368 2013 0.722 - - - - - - 0.722 - - - centrosomal protein 120 [Source:HGNC Symbol;Acc:HGNC:26690]
38. LGALS1_1 ENSGALG00000012420 1560 0.72 - - - - - - 0.720 - - - galectin 1 [Source:NCBI gene;Acc:396491]
39. DNAJA3 ENSGALG00000007821 3963 0.72 - - - - - - - 0.720 - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
40. KDM3A ENSGALG00000015803 2729 0.718 - - - - - - - - - 0.718 lysine demethylase 3A [Source:NCBI gene;Acc:422917]
41. KIF24 ENSGALG00000005806 124 0.716 - - - - - - - - - 0.716 kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]
42. PGGT1B ENSGALG00000008197 1881 0.714 - - - - - - 0.714 - - - protein geranylgeranyltransferase type I subunit beta [Source:HGNC Symbol;Acc:HGNC:8895]
43. RAD52 ENSGALG00000039171 6989 0.714 - - - - - - 0.714 - - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]
44. ZDHHC7 ENSGALG00000042522 1774 0.714 - - - - - - 0.714 - - - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
45. LSM6 ENSGALG00000009985 18582 0.713 - - - - - - 0.713 - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
46. NDST2 ENSGALG00000005107 4224 0.713 - - - - - - 0.713 - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
47. RBBP8 ENSGALG00000014982 3255 0.713 - - - - - - 0.713 - - - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
48. ASNSD1 ENSGALG00000041666 3757 0.711 - - - - - - 0.711 - - - asparagine synthetase domain containing 1 [Source:NCBI gene;Acc:423983]
49. REEP3 ENSGALG00000002904 130 0.71 - - - - - - - - - 0.710 receptor accessory protein 3 [Source:NCBI gene;Acc:423654]
50. TRAF-5 TRAF-5 102 0.71 - - - - - - - - - 0.710
51. ANKRA2 ENSGALG00000013511 3460 0.706 - - - - - - 0.706 - - - ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
52. MED21 ENSGALG00000027435 5766 0.705 - - - - - - 0.705 - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
53. C3orf38 ENSGALG00000015402 1395 0.703 - - - - - - 0.703 - - - chromosome 3 open reading frame 38 [Source:HGNC Symbol;Acc:HGNC:28384]
54. SCARB2 ENSGALG00000011499 2763 0.703 - - - - - - - - - 0.703 scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]
55. PLXNA2 ENSGALG00000001264 2413 0.703 - - - - - - - - - 0.703 plexin A2 [Source:HGNC Symbol;Acc:HGNC:9100]
56. GRPEL1 ENSGALG00000015549 11246 0.702 - - - - - - 0.702 - - - GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
57. STOM ENSGALG00000001434 356 0.701 - - - - - - - - - 0.701 stomatin [Source:HGNC Symbol;Acc:HGNC:3383]
58. RAD23B ENSGALG00000015540 10828 0.701 - - - - - - - - - 0.701 RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
59. EXOC2 ENSGALG00000012837 4914 0.7 - - - - - - - - - 0.700 exocyst complex component 2 [Source:NCBI gene;Acc:420889]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA