Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRIM13

Gene Name Gene ID Reads Annotation
TRIM13 ENSGALG00000017011 92 tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]











Genes with expression patterns similar to TRIM13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRIM13 ENSGALG00000017011 92 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
2. ENSGALG00000028964 ENSGALG00000028964 46 1.871 - - 0.996 - 0.875 - - - - -
3. L3MBTL3 ENSGALG00000034030 113 1.828 - - 0.994 - - - - 0.834 - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
4. GMPR ENSGALG00000012705 30 1.726 - - - - - 0.891 - - - 0.835 guanosine monophosphate reductase [Source:NCBI gene;Acc:420842]
5. MED15 ENSGALG00000006430 814 1.726 - - 0.969 - - - - 0.757 - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]
6. LIPA ENSGALG00000006378 4414 1.624 - - 0.830 - - 0.794 - - - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
7. MBLAC2 ENSGALG00000014649 16 1.59 - - - - 0.875 - 0.715 - - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
8. SNAPC4 ENSGALG00000044726 36 1.507 - - - - - - 0.715 - - 0.792 small nuclear RNA activating complex polypeptide 4 [Source:HGNC Symbol;Acc:HGNC:11137]
9. FAM171B ENSGALG00000002646 837 1.472 - - 0.732 - - - - 0.740 - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
10. UEVLD ENSGALG00000006342 164 0.997 - - 0.997 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
11. ITGB4 ENSGALG00000002389 44 0.996 - - 0.996 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
12. TDRD6 48 0.996 - - 0.996 - - - - - - - tudor domain containing 6
13. RQCD1 RQCD1 110 0.996 - - 0.996 - - - - - - -
14. SZT2 ENSGALG00000028561 255 0.996 - - 0.996 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
15. CLEC16A ENSGALG00000007167 66 0.996 - - 0.996 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
16. MRC2 ENSGALG00000000461 48 0.996 - - 0.996 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
17. SLC3A1 ENSGALG00000009973 608 0.995 - - 0.995 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
18. MED12 ENSGALG00000036322 814 0.995 - - 0.995 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
19. ENSGALG00000020103 ENSGALG00000020103 64 0.995 - - 0.995 - - - - - - -
20. CDC14B ENSGALG00000012627 110 0.995 - - 0.995 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
21. ITM2B ENSGALG00000016996 1112 0.994 - - 0.994 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
22. ENSGALG00000004703 ENSGALG00000004703 112 0.994 - - 0.994 - - - - - - -
23. SMARCAD1 ENSGALG00000037339 149 0.994 - - 0.994 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
24. ENSGALG00000002020 ENSGALG00000002020 183 0.994 - - 0.994 - - - - - - -
25. U4 U4 69 0.994 - - 0.994 - - - - - - -
26. FBXL5 ENSGALG00000014510 245 0.994 - - 0.994 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
27. OSGIN2 ENSGALG00000042840 83 0.994 - - 0.994 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
28. AKAP10 ENSGALG00000004679 103 0.994 - - 0.994 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
29. TCTN2 ENSGALG00000023683 3596 0.993 - - 0.993 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
30. GTF2H2 ENSGALG00000002399 2361 0.993 - - 0.993 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
31. PTDSS2 ENSGALG00000004300 682 0.993 - - 0.993 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
32. F2R ENSGALG00000014983 106 0.993 - - 0.993 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
33. NXPE3 ENSGALG00000015344 111 0.993 - - 0.993 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
34. FAM134C 860 0.992 - - 0.992 - - - - - - - family with sequence similarity 134 member C
35. DBN1 ENSGALG00000033405 216 0.992 - - 0.992 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
36. ABCC3 ENSGALG00000007522 340 0.991 - - 0.991 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
37. PRUNE PRUNE 452 0.991 - - 0.991 - - - - - - -
38. BBS5 ENSGALG00000009846 344 0.991 - - 0.991 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
39. RAD54L2 ENSGALG00000003243 187 0.99 - - 0.990 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
40. RPS6KB1 ENSGALG00000005198 169 0.99 - - 0.990 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
41. LRRC42 ENSGALG00000010743 384 0.99 - - 0.990 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
42. GDPD4 ENSGALG00000000690 824 0.989 - - 0.989 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
43. LRRC71 ENSGALG00000027351 695 0.988 - - 0.988 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
44. CHAMP1 ENSGALG00000016813 508 0.988 - - 0.988 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
45. SMOC2 ENSGALG00000011205 340 0.987 - - 0.987 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
46. BBX ENSGALG00000015353 1281 0.987 - - 0.987 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
47. IFT81 ENSGALG00000003854 2534 0.986 - - 0.986 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
48. ADK ENSGALG00000005057 199 0.986 - - 0.986 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
49. NGF ENSGALG00000002556 122 0.985 - - 0.985 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
50. TTPAL ENSGALG00000004244 2734 0.985 - - 0.985 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
51. KCTD3 ENSGALG00000009678 335 0.984 - - 0.984 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
52. ABCE1 ENSGALG00000009961 958 0.984 - - 0.984 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
53. ATP8B4 ENSGALG00000002326 456 0.983 - - 0.983 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
54. MLLT3 ENSGALG00000015078 502 0.983 - - 0.983 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
55. TUBGCP3 ENSGALG00000016836 332 0.983 - - 0.983 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
56. AASDHPPT ENSGALG00000027981 1017 0.982 - - 0.982 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
57. PCDH17 ENSGALG00000016941 1006 0.982 - - 0.982 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
58. GFER ENSGALG00000005579 1367 0.981 - - 0.981 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
59. WDR92 ENSGALG00000008760 3934 0.981 - - 0.981 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
60. CHGA ENSGALG00000010820 1028 0.981 - - 0.981 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
61. RFK ENSGALG00000033558 1364 0.981 - - 0.981 - - - - - - - riboflavin kinase, transcript variant X3
62. PCYT1B 190 0.981 - - 0.981 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
63. ATF7IP ENSGALG00000011814 1571 0.981 - - 0.981 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
64. SOBP ENSGALG00000043047 147 0.979 - - 0.979 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
65. RECQL ENSGALG00000013174 1323 0.979 - - 0.979 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
66. TMEM242 ENSGALG00000013689 377 0.978 - - 0.978 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
67. ENSGALG00000008689 ENSGALG00000008689 232 0.977 - - 0.977 - - - - - - -
68. NACAD 679 0.977 - - 0.977 - - - - - - - NAC alpha domain containing, transcript variant X1
69. GGT7 ENSGALG00000001062 476 0.976 - - 0.976 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
70. APTX ENSGALG00000001954 692 0.974 - - 0.974 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
71. WHSC1 1712 0.974 - - 0.974 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
72. ATP10D ENSGALG00000014192 94 0.974 - - 0.974 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
73. CEP104 ENSGALG00000000978 1130 0.974 - - 0.974 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
74. SETD1B ENSGALG00000004324 2897 0.974 - - 0.974 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
75. RAB37 ENSGALG00000027789 17 0.973 - - - - - 0.973 - - - - RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
76. RRN3 ENSGALG00000041989 3934 0.973 - - 0.973 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
77. WAPAL WAPAL 625 0.973 - - 0.973 - - - - - - -
78. RALGDS ENSGALG00000003412 4478 0.971 - - 0.971 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
79. CENPO ENSGALG00000016609 1699 0.97 - - 0.970 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
80. SGCE ENSGALG00000009670 3070 0.97 - - 0.970 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
81. SNX14 ENSGALG00000015831 2554 0.968 - - 0.968 - - - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
82. SLC37A3 ENSGALG00000012849 836 0.968 - - 0.968 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
83. CA9 ENSGALG00000021340 1431 0.968 - - 0.968 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
84. DDX6 ENSGALG00000033064 2193 0.967 - - 0.967 - - - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
85. AKT3 ENSGALG00000034081 866 0.967 - - 0.967 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
86. C18orf8 C18orf8 1512 0.966 - - 0.966 - - - - - - -
87. SLK ENSGALG00000008318 2220 0.965 - - 0.965 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
88. RALGAPA2 240 0.964 - - 0.964 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
89. CAMSAP1 ENSGALG00000001692 2617 0.961 - - 0.961 - - - - - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
90. SEPHS1 ENSGALG00000014575 10701 0.961 - - 0.961 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
91. STXBP6 ENSGALG00000009847 224 0.96 - - 0.960 - - - - - - - syntaxin binding protein 6 [Source:NCBI gene;Acc:423299]
92. YBX3 ENSGALG00000031890 819 0.96 - - 0.960 - - - - - - - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
93. TUBA4A ENSGALG00000000433 1367 0.959 - - 0.959 - - - - - - - tubulin alpha 4a
94. MIB1 ENSGALG00000014974 3583 0.959 - - 0.959 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
95. IFT57 ENSGALG00000015356 5540 0.958 - - 0.958 - - - - - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
96. RAD1 ENSGALG00000003365 1417 0.957 - - 0.957 - - - - - - - RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]
97. HOXA7 ENSGALG00000026989 6746 0.957 - - 0.957 - - - - - - - homeobox A7 [Source:NCBI gene;Acc:395290]
98. NDUFB1 ENSGALG00000028537 2059 0.956 - - 0.956 - - - - - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
99. SNN ENSGALG00000028876 1687 0.956 - - 0.956 - - - - - - - stannin [Source:NCBI gene;Acc:416429]
100. FBXO45 ENSGALG00000037281 3936 0.955 - - 0.955 - - - - - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]

There are 750 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA