Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TRHDE_1

Gene Name Gene ID Reads Annotation
TRHDE_1 TRHDE_1 102










Genes with expression patterns similar to TRHDE_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. TRHDE_1 TRHDE_1 102 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ttr ENSDARG00000037191 11 1.949 - - - - 0.953 - 0.996 - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
3. CU929119.2 CU929119.2 859 1.868 - - - - - - 0.923 0.945 -
4. si:ch211-284o19.8 ENSDARG00000053836 43 1.86 - - - - 0.866 - 0.994 - - si:ch211-284o19.8 [Source:ZFIN;Acc:ZDB-GENE-070912-289]
5. stk16 ENSDARG00000037777 255 1.842 - - - - - - 0.964 0.878 - serine/threonine kinase 16 [Source:ZFIN;Acc:ZDB-GENE-050417-102]
6. CABZ01081749.1 CABZ01081749.1 637 1.815 - - - - - - 0.886 0.929 -
7. phf16 phf16 1116 1.781 - - - - - - 0.811 0.970 -
8. ogfrl2 ENSDARG00000024815, ENSDARG00000111132 74 1.777 0.787 - - - - - 0.990 - - opioid growth factor receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-030616-523]
9. rfc5 ENSDARG00000035634 974 1.777 - - - - - - 0.870 0.907 - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
10. MPPED1 ENSDARG00000088181 117 1.775 0.779 - - - - - 0.996 - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
11. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.75 - - - - - - 0.917 0.833 - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
12. ndc1 ENSDARG00000021120 2417 1.742 - - - - - - 0.822 0.920 - NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
13. chsy1 ENSDARG00000079027 455 1.741 - - - - - - 0.890 0.851 - chondroitin sulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3127]
14. otx2 766 1.734 - - - - - - 0.990 - 0.744 orthodenticle homeobox 2, transcript variant X2
15. pggt1b ENSDARG00000103464 441 1.725 - - - - - - 0.759 0.966 - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
16. mon1a ENSDARG00000078585 554 1.725 - - - - - - 0.771 0.954 - MON1 secretory trafficking family member A [Source:ZFIN;Acc:ZDB-GENE-070615-6]
17. mlh1 ENSDARG00000025948 130 1.715 - - - - - 0.740 - 0.975 - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
18. rad23aa ENSDARG00000020001 374 1.7 0.718 - - - - - - 0.982 - RAD23 homolog A, nucleotide excision repair protein a [Source:ZFIN;Acc:ZDB-GENE-040808-59]
19. pitpnb ENSDARG00000036005 513 1.665 - - - - - - 0.801 0.864 - phosphatidylinositol transfer protein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-895]
20. rspry1 ENSDARG00000062558 1424 1.643 - - - - - - 0.784 0.859 - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
21. ikbkb ENSDARG00000079123 498 1.638 - - - - - - 0.820 0.818 - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
22. gabrb2 ENSDARG00000079586 33 1.634 0.779 - - - 0.855 - - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
23. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 1.611 - - - - - - 0.738 0.873 - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
24. DST ENSDARG00000101858 4395 1.61 - - - - - - 0.705 0.905 - dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
25. rhbdl2 ENSDARG00000069833, ENSDARG00000109477 891 1.608 - - - - - - 0.729 0.879 - rhomboid, veinlet-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-732]
26. rab25a ENSDARG00000058800 451 1.607 - - - - - - 0.826 0.781 - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
27. ABCA7 ABCA7 12 1.596 0.779 - - - 0.817 - - - -
28. BX470254.1_1 ENSDARG00000097402 50 1.581 0.779 - - - - - 0.802 - -
29. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 1.575 - - - - - - 0.790 0.785 - DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
30. iqsec2 iqsec2 304 1.554 - - - - 0.830 - 0.724 - -
31. sult6b1 ENSDARG00000086826 2070 1.548 - - - - - - 0.710 0.838 - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
32. Mar-02 Mar-02 1812 1.546 - - - - - - 0.702 0.844 -
33. BX569781.3 BX569781.3 576 1.542 - - - - - - 0.735 0.807 -
34. CR388046.3 ENSDARG00000105537 108 1.534 0.732 - - - - 0.802 - - -
35. ADAMTS15_1 ADAMTS15_1 11 1.53 0.779 - - - - 0.751 - - -
36. dand5 ENSDARG00000036471 8 1.519 0.779 - - - 0.740 - - - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
37. slc30a5 ENSDARG00000051921 1113 1.48 - - - - - - 0.749 0.731 - solute carrier family 30 (zinc transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-040718-6]
38. 5S_rRNA_18 5S_rRNA_18 270 1.466 0.715 - - - - - 0.751 - -
39. and3 ENSDARG00000056873 22650 1.457 0.755 - - - - - 0.702 - - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
40. slc6a6b ENSDARG00000098438 7 1 - - - - - 1.000 - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
41. sh3bp4 ENSDARG00000030104, ENSDARG00000109621 51 1 - - - - - 1.000 - - - SH3-domain binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-509]
42. mir92a-1 20 1 - - - - - 1.000 - - - microRNA 92a-1
43. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 1 - - - - - 1.000 - - -
44. si:ch73-167f18.3 si:ch73-167f18.3 78 1 - - - - - 1.000 - - -
45. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 0.999 - - - - - - 0.999 - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
46. pign ENSDARG00000077532 123 0.997 - - - - - - 0.997 - - phosphatidylinositol glycan anchor biosynthesis, class N [Source:ZFIN;Acc:ZDB-GENE-080204-114]
47. ccrl1a ccrl1a 40 0.997 - - - - - - 0.997 - -
48. fpgt ENSDARG00000042139 155 0.997 - - - - - - 0.997 - - fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
49. si:ch211-113a14.12 ENSDARG00000077456 1004 0.996 - - - - - - 0.996 - - si:ch211-113a14.12 [Source:ZFIN;Acc:ZDB-GENE-121214-99]
50. LAMC2 ENSDARG00000068288 37 0.996 - - - - - - 0.996 - - laminin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-110222-3]
51. trim62 ENSDARG00000060901 12 0.996 - - - - - - 0.996 - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
52. ENSDARG00000091446 ENSDARG00000091446 239 0.996 - - - - - - 0.996 - -
53. SLC38A9 ENSDARG00000032769 35 0.996 - - - - - - 0.996 - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
54. si:dkey-177p2.15p si:dkey-177p2.15p 20 0.996 - - - - - - 0.996 - -
55. ctgfb ENSDARG00000104292 69 0.996 - - - - - - 0.996 - - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
56. BICD2_1 BICD2_1 18 0.996 - - - - - - 0.996 - -
57. VWA5A_1 VWA5A_1 6 0.996 - - - - - - 0.996 - -
58. si:busm1-180g5.7 si:busm1-180g5.7 15 0.996 - - - - - - 0.996 - -
59. zgc:136254 ENSDARG00000068465 27 0.996 - - - - - - 0.996 - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
60. guca1c ENSDARG00000030758 9 0.996 - - - - - - 0.996 - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
61. CU681846.1 CU681846.1 86 0.995 - - - - - - 0.995 - -
62. si:ch211-174j14.2 ENSDARG00000093015 111 0.995 - - - - - - 0.995 - - si:ch211-174j14.2 [Source:ZFIN;Acc:ZDB-GENE-050419-63]
63. si:ch211-117l17.4 ENSDARG00000103534 24 0.995 - - - - - - 0.995 - - si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
64. KBTBD13 ENSDARG00000076449 10 0.994 - - - - - - 0.994 - - kelch repeat and BTB (POZ) domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-140106-122]
65. fubp3 ENSDARG00000086896 21 0.994 - - - - - - 0.994 - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
66. tnfb ENSDARG00000013598 94 0.994 - - - - - - 0.994 - - tumor necrosis factor b (TNF superfamily, member 2) [Source:ZFIN;Acc:ZDB-GENE-050601-2]
67. adck1 ENSDARG00000062561 22 0.994 - - - - - - 0.994 - - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
68. prkcba ENSDARG00000008723, ENSDARG00000116813 30 0.994 - - - - - - 0.994 - - protein kinase C, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1354]
69. CABZ01048373.1 CABZ01048373.1 81 0.994 - - - - - - 0.994 - -
70. kcnh6 kcnh6 59 0.993 - - - - - - 0.993 - -
71. si:dkey-16n15.3 223 0.993 - - - - - - 0.993 - - si:dkey-16n15.3
72. cdadc1 ENSDARG00000036650 16 0.992 - - - - - - 0.992 - - cytidine and dCMP deaminase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-163]
73. si:rp71-3c13.3 si:rp71-3c13.3 128 0.992 - - - - - - 0.992 - -
74. CR790368.1 ENSDARG00000100936 20 0.992 - - - - - - 0.992 - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
75. si:dkey-240h12.4 ENSDARG00000034210 114 0.992 - - - - - - 0.992 - - si:dkey-240h12.4 [Source:ZFIN;Acc:ZDB-GENE-070705-406]
76. spsb3a ENSDARG00000077737 527 0.991 - - - - - - 0.991 - - splA/ryanodine receptor domain and SOCS box containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-4182]
77. lpar6b ENSDARG00000069441 65 0.991 - - - - - - 0.991 - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
78. si:ch211-135f11.1 166 0.991 - - - - - - 0.991 - - si:ch211-135f11.1, transcript variant X3
79. TTBK1 TTBK1 120 0.991 - - - - - - 0.991 - -
80. ca8 ENSDARG00000039098 401 0.99 - - - - - - 0.990 - - carbonic anhydrase VIII [Source:ZFIN;Acc:ZDB-GENE-050417-26]
81. dhrs13l1 ENSDARG00000098746 102 0.989 - - - - - - 0.989 - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
82. fntb ENSDARG00000027916 736 0.989 - - - - - - 0.989 - - farnesyltransferase, CAAX box, beta [Source:ZFIN;Acc:ZDB-GENE-030131-2220]
83. si:ch211-219f7.3 si:ch211-219f7.3 48 0.988 - - - - - - 0.988 - -
84. SUOX ENSDARG00000091574 122 0.988 - - - - - - 0.988 - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
85. extl2 ENSDARG00000063191 118 0.987 - - - - - - 0.987 - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
86. U3 U3 287 0.986 - - - - - - 0.986 - -
87. GSG2 GSG2 1162 0.986 - - - - - - 0.986 - -
88. BX296557.2 BX296557.2 1083 0.986 - - - - - - 0.986 - -
89. inadl 80 0.984 - - - - - - 0.984 - - InaD-like (Drosophila), transcript variant X4
90. ulk4 ENSDARG00000004176 85 0.984 - - - - - - 0.984 - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
91. si:dkeyp-86h10.3 ENSDARG00000095615 253 0.983 - - - - - - 0.983 - - si:dkeyp-86h10.3 [Source:ZFIN;Acc:ZDB-GENE-100922-65]
92. tbc1d22a ENSDARG00000045510 363 0.983 - - - - - - 0.983 - - TBC1 domain family, member 22a [Source:ZFIN;Acc:ZDB-GENE-041114-144]
93. ppcs ENSDARG00000061889 224 0.983 - - - - - - 0.983 - - phosphopantothenoylcysteine synthetase [Source:ZFIN;Acc:ZDB-GENE-060512-104]
94. NPBWR2 NPBWR2 132 0.982 - - - - - - 0.982 - -
95. SLC44A2 ENSDARG00000037059 88 0.982 - - - - - - 0.982 - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
96. si:dkey-57k17.1 ENSDARG00000104697 442 0.981 - - - - - - - 0.981 - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
97. tmprss13a ENSDARG00000100969 84 0.98 - - - - - - 0.980 - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
98. RUFY1 ENSDARG00000078685 114 0.98 - - - - - 0.980 - - - RUN and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-4]
99. fam193b ENSDARG00000102831 442 0.98 - - - - - - 0.980 - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
100. slc2a8 ENSDARG00000104278 764 0.978 - - - - - - - 0.978 - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]

There are 1399 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA