Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TREM-B1

Gene Name Gene ID Reads Annotation
TREM-B1 ENSGALG00000003361 8 triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]











Genes with expression patterns similar to TREM-B1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TREM-B1 ENSGALG00000003361 8 5 - - - 1.000 1.000 1.000 - 1.000 - 1.000 triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
2. C1R ENSGALG00000014659 9 1.841 - - - - 0.841 1.000 - - - - complement C1r [Source:HGNC Symbol;Acc:HGNC:1246]
3. GP5 ENSGALG00000045125 3 1.841 - - - - 0.841 - - 1.000 - - glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
4. FANCF ENSGALG00000003660 25 1.76 - - - - - 0.901 - 0.859 - - FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
5. LHFP 167 1.549 - - - - - 0.704 - 0.845 - - lipoma HMGIC fusion partner
6. snoZ39 snoZ39 2 1 - - - - - - - 1.000 - -
7. DBN1 ENSGALG00000033405 216 1 - - - - - - - 1.000 - - drebrin 1 [Source:NCBI gene;Acc:396496]
8. FAM214B ENSGALG00000002069, ENSGALG00000038279 213 1 - - - - - - - 1.000 - - family with sequence similarity 214 member B, transcript variant X14
9. CD200L ENSGALG00000015395 14 1 - - - - - 1.000 - - - - CD200 molecule-like [Source:NCBI gene;Acc:418424]
10. FRY ENSGALG00000017075 8 1 - - - - - 1.000 - - - - FRY microtubule binding protein [Source:HGNC Symbol;Acc:HGNC:20367]
11. ALKBH3 ENSGALG00000041309 7 1 - - - - - - - 1.000 - - alkB homolog 3, alpha-ketoglutaratedependent dioxygenase [Source:NCBI gene;Acc:423169]
12. OTC ENSGALG00000016254 6 1 - - - - - 1.000 - - - - ornithine carbamoyltransferase [Source:NCBI gene;Acc:395735]
13. LOXL4 ENSGALG00000013090 9 1 - - - - - 1.000 - - - - lysyl oxidase like 4 [Source:HGNC Symbol;Acc:HGNC:17171]
14. PKP3 ENSGALG00000004260 3 1 - - - - - 1.000 - - - - plakophilin 3 [Source:HGNC Symbol;Acc:HGNC:9025]
15. ENSGALG00000023027 ENSGALG00000023027 5 1 - - - - - - - 1.000 - -
16. CLDN4 2 1 - - - - - 1.000 - - - - claudin 4
17. GABRA5 ENSGALG00000016744 12 1 - - - - - - - 1.000 - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
18. ACACB 6 1 - - - - - - - 1.000 - - acetyl-CoA carboxylase beta
19. SPATA4 ENSGALG00000010822 4 1 - - - - - - - 1.000 - - spermatogenesis associated 4 [Source:NCBI gene;Acc:422571]
20. CLCNKB ENSGALG00000003713 27 1 - - - - - 1.000 - - - - chloride voltage-gated channel Kb, transcript variant X3
21. SLC26A2 ENSGALG00000001239 3 1 - - - - - 1.000 - - - - solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]
22. EPAS1 ENSGALG00000010005 14 1 - - - - - 1.000 - - - - endothelial PAS domain protein 1 [Source:NCBI gene;Acc:395596]
23. VSTM2L ENSGALG00000006792 11 1 - - - - - 1.000 - - - - V-set and transmembrane domain containing 2 like [Source:HGNC Symbol;Acc:HGNC:16096]
24. SGPP2 ENSGALG00000005245 20 1 - - - - - 1.000 - - - - sphingosine-1-phosphate phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:19953]
25. GTPBP6 ENSGALG00000016717 17 1 - - - - - - - 1.000 - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
26. MUC13 7 1 - - - - - - - 1.000 - - mucin 13, cell surface associated, transcript variant X10
27. SUSD1 ENSGALG00000015677 12 1 - - - - - - - 1.000 - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
28. IGFBP1 ENSGALG00000043493 68 1 - - - - - 1.000 - - - - insulin like growth factor binding protein 1 [Source:NCBI gene;Acc:408027]
29. TBC1D13 ENSGALG00000004645 1 1 - - - - - 1.000 - - - - TBC1 domain family member 13 [Source:HGNC Symbol;Acc:HGNC:25571]
30. RBP7 ENSGALG00000002637 11 1 - - - - - 1.000 - - - - retinol binding protein 7 [Source:HGNC Symbol;Acc:HGNC:30316]
31. SRSF2 ENSGALG00000017357 180 1 - - - - - 1.000 - - - - serine and arginine rich splicing factor 2 [Source:NCBI gene;Acc:396195]
32. UGP2 ENSGALG00000008855 20 1 - - - - - 1.000 - - - - UDP-glucose pyrophosphorylase 2 [Source:NCBI gene;Acc:373900]
33. FAM53B ENSGALG00000009718 1 1 - - - - - 1.000 - - - - family with sequence similarity 53 member B [Source:HGNC Symbol;Acc:HGNC:28968]
34. SGSM1 ENSGALG00000005379 10 1 - - - - - 1.000 - - - - small G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:29410]
35. SFT2D2 ENSGALG00000019228 10 1 - - - - - - - 1.000 - - SFT2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25140]
36. C1orf228 3 1 - - - - - - - 1.000 - - chromosome 1 open reading frame 228, transcript variant X5
37. ICOS ENSGALG00000008656 27 1 - - - 1.000 - - - - - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
38. ZDHHC18 ENSGALG00000034910 16 1 - - - - - 1.000 - - - - zinc finger, DHHC-type containing 18 [Source:NCBI gene;Acc:419575]
39. TDRD6 48 1 - - - - - 1.000 - - - - tudor domain containing 6
40. SPTSSBL ENSGALG00000026131 70 1 - - - - - 1.000 - - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
41. LOC771066 ENSGALG00000026964 1 1 - - - - - 1.000 - - - - claw keratin-like, transcript variant X1
42. GPR17 ENSGALG00000037153 3 1 - - - - - - - 1.000 - - G protein-coupled receptor 17 [Source:HGNC Symbol;Acc:HGNC:4471]
43. C4A ENSGALG00000017040 5 1 - - - - - 1.000 - - - - complement C4A (Rodgers blood group), transcript variant X2
44. SLC30A8 ENSGALG00000034377 3 1 - - - - - - - 1.000 - - solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
45. ENSGALG00000023353 ENSGALG00000023353 1 1 - - - - - - - 1.000 - -
46. CD101 12 1 - - - - - - - 1.000 - - CD101 molecule, transcript variant X4
47. SULT1C SULT1C 118 1 - - - - - 1.000 - - - -
48. C8H1ORF52 C8H1ORF52 118 1 - - - 1.000 - - - - - -
49. ENSGALG00000022792 ENSGALG00000022792 2 1 - - - - - 1.000 - - - -
50. CDHR1 ENSGALG00000002314 24 1 - - - - - - - 1.000 - - cadherin related family member 1 [Source:NCBI gene;Acc:414847]
51. OLAH ENSGALG00000043833 3 1 - - - - - 1.000 - - - - oleoyl-ACP hydrolase [Source:HGNC Symbol;Acc:HGNC:25625]
52. GSAP ENSGALG00000008312 12 1 - - - - - - - 1.000 - - gamma-secretase activating protein [Source:HGNC Symbol;Acc:HGNC:28042]
53. ESPN ENSGALG00000000645 2 1 - - - - - 1.000 - - - - espin [Source:HGNC Symbol;Acc:HGNC:13281]
54. ENSGALG00000004119 ENSGALG00000004119 1 1 - - - - - 1.000 - - - -
55. SOX10 ENSGALG00000012290 3942 1 - - - - - - - 1.000 - - SRY-box 10 [Source:NCBI gene;Acc:395573]
56. ENSGALG00000028652 ENSGALG00000028652 65 1 - - - - - - - 1.000 - -
57. RRP8 109 1 - - - - - 1.000 - - - - ribosomal RNA processing 8, methyltransferase, homolog (yeast), transcript variant X2
58. ZNF366 ENSGALG00000015008 189 1 - - - - - 1.000 - - - - zinc finger protein 366 [Source:HGNC Symbol;Acc:HGNC:18316]
59. HBP1 ENSGALG00000008050 19 1 - - - - - - - 1.000 - - HMG-box transcription factor 1 [Source:NCBI gene;Acc:417705]
60. SWAP70 ENSGALG00000005750 32 0.997 - - - - - - - 0.997 - - switching B cell complex subunit SWAP70 [Source:NCBI gene;Acc:423044]
61. GABRA2 ENSGALG00000014206 19 0.994 - - - - - - - 0.994 - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
62. ENSGALG00000025727 ENSGALG00000025727 26 0.992 - - - - - 0.992 - - - -
63. PTBP3 ENSGALG00000015669 16 0.984 - - - - - - - 0.984 - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
64. BTLA ENSGALG00000015398 34 0.984 - - - - - 0.984 - - - - B and T lymphocyte associated, transcript variant X1
65. BLB1 ENSGALG00000000141 13 0.982 - - - - - 0.982 - - - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
66. TOM1L2 ENSGALG00000004902 89 0.978 - - - - - - - 0.978 - - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
67. PCOLCE2 ENSGALG00000002623 8 0.976 - - - - - 0.976 - - - - procollagen C-endopeptidase enhancer 2 [Source:HGNC Symbol;Acc:HGNC:8739]
68. CKMT1A ENSGALG00000008352 44 0.971 - - - - - 0.971 - - - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
69. NMRAL1 ENSGALG00000029820 29 0.97 - - - - - - - 0.970 - - NmrA like redox sensor 1 [Source:NCBI gene;Acc:416672]
70. SRRL ENSGALG00000002638 26 0.97 - - - - - - - 0.970 - - serine racemase-like, transcript variant X8
71. SEPN1 SEPN1 58 0.968 - - - - - 0.968 - - - -
72. PLCD4 ENSGALG00000026687 24 0.968 - - - - - 0.968 - - - - phospholipase C delta 4 [Source:HGNC Symbol;Acc:HGNC:9062]
73. INSC ENSGALG00000032558 74 0.968 - - - - - - - 0.968 - - INSC, spindle orientation adaptor protein [Source:HGNC Symbol;Acc:HGNC:33116]
74. PRKRIR PRKRIR 46 0.968 - - - - - - - 0.968 - -
75. MUC6 ENSGALG00000040530 11 0.963 - - - - - 0.963 - - - - mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517]
76. ENSGALG00000020972 ENSGALG00000020972 54 0.955 - - - - - - - 0.955 - -
77. MAP3K13 ENSGALG00000006655 632 0.954 - - - - - - - 0.954 - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
78. HECTD2 ENSGALG00000038043 177 0.953 - - - - - - - 0.953 - - HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]
79. ZP1 ENSGALG00000031916 122 0.953 - - - - - - - 0.953 - - zona pellucida glycoprotein 1 [Source:NCBI gene;Acc:395418]
80. URB2 ENSGALG00000011101 12 0.953 - - - - - - - 0.953 - - URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:28967]
81. CHGB ENSGALG00000046616 357 0.948 - - - - - - - 0.948 - - chromogranin B [Source:HGNC Symbol;Acc:HGNC:1930]
82. KRT20 ENSGALG00000019716 11 0.947 - - - - - 0.947 - - - - keratin 20 [Source:NCBI gene;Acc:420045]
83. PDE8A ENSGALG00000005992 10 0.947 - - - - - 0.947 - - - - phosphodiesterase 8A [Source:HGNC Symbol;Acc:HGNC:8793]
84. RAB43 ENSGALG00000005021 5 0.946 - - - - - - - 0.946 - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
85. PWWP2B ENSGALG00000010491 30 0.945 - - - - - - - 0.945 - - PWWP domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25150]
86. ARHGAP20 ENSGALG00000017150 100 0.941 - - - - - 0.941 - - - - Rho GTPase activating protein 20 [Source:HGNC Symbol;Acc:HGNC:18357]
87. BFIV21 BFIV21 30 0.938 - - - - - - - 0.938 - -
88. ZNF507 ENSGALG00000004532 78 0.938 - - - - - - - 0.938 - - zinc finger protein 507, transcript variant X2
89. BBS9 ENSGALG00000031650 13 0.935 - - - - - - - 0.935 - - Bardet-Biedl syndrome 9, transcript variant X5
90. RAD54L2 ENSGALG00000003243 187 0.933 - - - - - - - 0.933 - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
91. ZNF827 ENSGALG00000009982 7 0.931 - - - - - 0.931 - - - - zinc finger protein 827 [Source:HGNC Symbol;Acc:HGNC:27193]
92. SNORA31 SNORA31 183 0.931 - - - - - 0.931 - - - -
93. HMGCS2 ENSGALG00000002960 54 0.93 - - - 0.930 - - - - - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
94. LOC100858797 ENSGALG00000027167 7 0.93 - - - 0.930 - - - - - - feather keratin 1-like, transcript variant X1
95. CALR3 ENSGALG00000003914 8 0.93 - - - 0.930 - - - - - - calreticulin 3 [Source:HGNC Symbol;Acc:HGNC:20407]
96. ENSGALG00000020578 ENSGALG00000020578 25 0.93 - - - 0.930 - - - - - -
97. LRRC55 ENSGALG00000029130 21 0.93 - - - 0.930 - - - - - - leucine rich repeat containing 55 [Source:HGNC Symbol;Acc:HGNC:32324]
98. ACSS1L ENSGALG00000010225 5 0.93 - - - 0.930 - - - - - - acyl-CoA synthetase short-chain family member 1-like, transcript variant X3
99. ABCA8 ENSGALG00000021399 11 0.926 - - - - - 0.926 - - - - ATP binding cassette subfamily A member 8
100. TIE1 ENSGALG00000009957 97 0.926 - - - - - 0.926 - - - - tyrosine kinase with immunoglobulin like and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:11809]

There are 179 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA