Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRDN

Gene Name Gene ID Reads Annotation
TRDN ENSGALG00000014848 130 triadin











Genes with expression patterns similar to TRDN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRDN ENSGALG00000014848 130 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 triadin
2. CRISPLD1 ENSGALG00000033880 64 1.867 - - - 0.867 - - - 1.000 - - cysteine rich secretory protein LCCL domain containing 1 [Source:NCBI gene;Acc:395369]
3. FBXO18 35 1.832 - - - 0.890 - - - 0.942 - - F-box protein, helicase, 18, transcript variant X4
4. SGIP1 ENSGALG00000011113 20 1.676 - - - - - 0.917 0.759 - - - SH3 domain GRB2 like endophilin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25412]
5. HOGA1 ENSGALG00000006134 25 1.668 - - - - - 0.946 0.722 - - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:HGNC Symbol;Acc:HGNC:25155]
6. CCLI8 ENSGALG00000043065 196 1.592 - - - - - 0.800 - - 0.792 - chemokine
7. BERT BERT 283 1.58 - - - 0.708 - - - - 0.872 -
8. PCCA ENSGALG00000016872 103 1.564 - - - - - - 0.843 - 0.721 - propionyl-CoA carboxylase subunit alpha [Source:HGNC Symbol;Acc:HGNC:8653]
9. CIDEC ENSGALG00000026945 718 1.485 - - - - - 0.763 - - - 0.722 cell death inducing DFFA like effector c [Source:NCBI gene;Acc:100859733]
10. VAV3 ENSGALG00000039327 714 1.462 - - - 0.748 - - - - 0.714 - vav 3 guanine nucleotide exchange factor [Source:NCBI gene;Acc:373939]
11. C20orf85 ENSGALG00000027484 3 1 - - - - - - 1.000 - - - chromosome 20 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:16216]
12. RYR3 ENSGALG00000009705 30 1 - - - - - - 1.000 - - - ryanodine receptor 3 [Source:NCBI gene;Acc:396111]
13. TNNC2 ENSGALG00000006835 2963 1 - - - - - - - 1.000 - - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
14. ATXN3 ENSGALG00000010766 48 1 - - - - - - 1.000 - - - ataxin 3 [Source:NCBI gene;Acc:378424]
15. MOG ENSGALG00000022875 9 1 - - - - - - 1.000 - - - myelin oligodendrocyte glycoprotein, transcript variant X50
16. TLR15 ENSGALG00000008166 29 1 - - - - - - - 1.000 - - Gallus gallus toll-like receptor 15 (TLR15), mRNA. [Source:RefSeq mRNA;Acc:NM_001037835]
17. UNC5D ENSGALG00000001608 4 1 - - - - - - - 1.000 - - unc-5 netrin receptor D [Source:HGNC Symbol;Acc:HGNC:18634]
18. GKN2 ENSGALG00000039187 173 1 - - - - - - - 1.000 - - gastrokine 2 [Source:HGNC Symbol;Acc:HGNC:24588]
19. RHAG ENSGALG00000016684 2 1 - - - - - - 1.000 - - - Rh associated glycoprotein [Source:NCBI gene;Acc:395118]
20. DNASE2 DNASE2 58 1 - - - - - - 1.000 - - -
21. PTPRF ENSGALG00000010053 27 1 - - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type F [Source:HGNC Symbol;Acc:HGNC:9670]
22. MBD5 ENSGALG00000012449 27 1 - - - - - - 1.000 - - - methyl-CpG binding domain protein 5 [Source:HGNC Symbol;Acc:HGNC:20444]
23. SNORA33 SNORA33 11 1 - - - - - - - 1.000 - -
24. GALR GALR 17 1 - - - - - - - 1.000 - -
25. H6PD ENSGALG00000002492 3 1 - - - - - - 1.000 - - - hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4795]
26. FAM83C ENSGALG00000031906 1 1 - - - - - - - 1.000 - - family with sequence similarity 83 member C [Source:HGNC Symbol;Acc:HGNC:16121]
27. CD109 ENSGALG00000015910 11 1 - - - - - - - 1.000 - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
28. Mar-11 Mar-11 16 1 - - - - - - 1.000 - - -
29. HGSNAT ENSGALG00000010136 18 1 - - - - - - 1.000 - - - heparan-alpha-glucosaminide N-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:26527]
30. ENSGALG00000018431 ENSGALG00000018431 2 1 - - - - - - - 1.000 - -
31. CDKN1AL ENSGALG00000026896 0 1 - - - - - - - 1.000 - - cyclin dependent kinase inhibitor 1A-like, transcript variant X5
32. GPR97 GPR97 16 1 - - - - - - 1.000 - - -
33. RNP ENSGALG00000028991 10 1 - - - - - - - 1.000 - - renal natriuretic peptide [Source:NCBI gene;Acc:100526659]
34. SMOX ENSGALG00000015977 18 1 - - - - - - - 1.000 - - spermine oxidase [Source:HGNC Symbol;Acc:HGNC:15862]
35. ENSGALG00000028652 ENSGALG00000028652 65 1 - - - - - - 1.000 - - -
36. LOC431653 ENSGALG00000025921 4 1 - - - - - - 1.000 - - - LOC431653, transcript variant X3
37. ENSGALG00000011933 ENSGALG00000011933 1 1 - - - - - - - 1.000 - -
38. CCDC13 ENSGALG00000005303 13 1 - - - - - - - 1.000 - - coiled-coil domain containing 13, transcript variant X3
39. PNMT ENSGALG00000027281 14 1 - - - - - - - 1.000 - - phenylethanolamine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:9160]
40. SLC2A10 ENSGALG00000004498 421 1 - - - - - - 1.000 - - - solute carrier family 2 member 10 [Source:HGNC Symbol;Acc:HGNC:13444]
41. FAR2 ENSGALG00000017291 16 1 - - - - - - 1.000 - - - fatty acyl-CoA reductase 2 [Source:HGNC Symbol;Acc:HGNC:25531]
42. FAM46C 13 1 - - - - - - - 1.000 - - family with sequence similarity 46 member C
43. ZNF804A ENSGALG00000023886 52 1 - - - - - - 1.000 - - - zinc finger protein 804A [Source:HGNC Symbol;Acc:HGNC:21711]
44. KLF7 ENSGALG00000008501 2 1 - - - - - - 1.000 - - - Gallus gallus Kruppel like factor 7 (KLF7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318990]
45. HSD3B7 ENSGALG00000045366 12 1 - - - - - - 1.000 - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7, transcript variant X2
46. PIT-1 PIT-1 8 1 - - - - - - 1.000 - - -
47. CYLD ENSGALG00000003753 11 1 - - - - - - 1.000 - - - CYLD lysine 63 deubiquitinase [Source:HGNC Symbol;Acc:HGNC:2584]
48. ATP13A4 ENSGALG00000020827 0 1 - - - - - - - 1.000 - - ATPase 13A4 [Source:NCBI gene;Acc:424901]
49. CCDC39 ENSGALG00000021855 23 1 - - - - - - 1.000 - - - coiled-coil domain containing 39
50. AFTPH ENSGALG00000008828 21 1 - - - - - - 1.000 - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
51. MYO1D ENSGALG00000000674 14 1 - - - - - - 1.000 - - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
52. CPA6 ENSGALG00000041918 54 1 - - - - - - 1.000 - - - carboxypeptidase A6 [Source:NCBI gene;Acc:420171]
53. GBF1 ENSGALG00000005637 32 1 - - - - - - 1.000 - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:4181]
54. SNORD94 SNORD94 10 1 - - - - - - 1.000 - - -
55. GRM8 ENSGALG00000039403 17 1 - - - - - - 1.000 - - - glutamate metabotropic receptor 8 [Source:HGNC Symbol;Acc:HGNC:4600]
56. GABRA2 ENSGALG00000014206 19 1 - - - - - - 1.000 - - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
57. EIF4ENIF1 ENSGALG00000006898 24 1 - - - - - - 1.000 - - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:HGNC Symbol;Acc:HGNC:16687]
58. CHRNA10 ENSGALG00000022702 7 1 - - - - - - 1.000 - - - cholinergic receptor, nicotinic, alpha 10 (neuronal) [Source:NCBI gene;Acc:430628]
59. IQSEC1 ENSGALG00000005042 24 1 - - - - - - - 1.000 - - IQ motif and Sec7 domain 1 [Source:HGNC Symbol;Acc:HGNC:29112]
60. MTHFD2L ENSGALG00000010855 14 1 - - - - - - 1.000 - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:HGNC Symbol;Acc:HGNC:31865]
61. SLC26A2 ENSGALG00000001239 3 1 - - - - - - - 1.000 - - solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]
62. ENSGALG00000028769 ENSGALG00000028769 11 1 - - - - - - 1.000 - - -
63. C8orf37 ENSGALG00000038971 5 1 - - - - - - 1.000 - - - chromosome 8 open reading frame 37 [Source:HGNC Symbol;Acc:HGNC:27232]
64. AMZ1 ENSGALG00000004358 2 1 - - - - - - - 1.000 - - archaelysin family metallopeptidase 1
65. BDH1B ENSGALG00000006976 9 1 - - - - - - 1.000 - - - 3-hydroxybutyrate dehydrogenase, type 1 B, transcript variant X1
66. PIGR ENSGALG00000000919 3 1 - - - - - - 1.000 - - - polymeric immunoglobulin receptor [Source:NCBI gene;Acc:419848]
67. TMEM161B ENSGALG00000010896 36 1 - - - - - - - 1.000 - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
68. OCM ENSGALG00000003462 6 1 - - - - - - - 1.000 - - oncomodulin [Source:NCBI gene;Acc:386586]
69. GFM2 ENSGALG00000014939 26 1 - - - - - - - 1.000 - - G elongation factor mitochondrial 2 [Source:HGNC Symbol;Acc:HGNC:29682]
70. SNORD74 SNORD74 0 1 - - - - - - - 1.000 - -
71. TLDC2 ENSGALG00000029033 6 1 - - - - - - - 1.000 - - TBC/LysM-associated domain containing 2, transcript variant X2
72. CCDC85C 2 1 - - - - - - 1.000 - - - coiled-coil domain containing 85C, transcript variant X1
73. CCDC180 109 0.986 - - - - - - - 0.986 - - coiled-coil domain containing 180
74. CRK ENSGALG00000002656 15 0.986 - - - - - - - 0.986 - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
75. SLC24A2 ENSGALG00000015080 54 0.986 - - - - - - - 0.986 - - solute carrier family 24 member 2 [Source:NCBI gene;Acc:414891]
76. RASD1 ENSGALG00000004860 133 0.985 - - - - - - - 0.985 - - ras related dexamethasone induced 1 [Source:NCBI gene;Acc:416507]
77. CDKL5 ENSGALG00000016529 26 0.963 - - - - - 0.963 - - - - cyclin dependent kinase like 5 [Source:HGNC Symbol;Acc:HGNC:11411]
78. JMY ENSGALG00000014819 46 0.963 - - - - - 0.963 - - - - junction mediating and regulatory protein, p53 cofactor [Source:HGNC Symbol;Acc:HGNC:28916]
79. PAX2 ENSGALG00000005689 351 0.957 - - - - - 0.957 - - - - paired box 2 [Source:NCBI gene;Acc:395574]
80. FAM3D ENSGALG00000007152 4 0.946 - - - - - 0.946 - - - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
81. RNF169 ENSGALG00000017309 8 0.946 - - - - - 0.946 - - - - ring finger protein 169 [Source:HGNC Symbol;Acc:HGNC:26961]
82. RHCG ENSGALG00000006635 7 0.946 - - - - - 0.946 - - - - Rh family C glycoprotein [Source:NCBI gene;Acc:415490]
83. MKNK2 ENSGALG00000003845 1 0.946 - - - - - 0.946 - - - - MAP kinase interacting serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:7111]
84. IL2RG ENSGALG00000005638 21 0.946 - - - - - 0.946 - - - - interleukin 2 receptor subunit gamma [Source:NCBI gene;Acc:395199]
85. ENSGALG00000009953 ENSGALG00000009953 5 0.946 - - - - - 0.946 - - - -
86. HSD17B14 ENSGALG00000007727 3 0.946 - - - - - 0.946 - - - - hydroxysteroid 17-beta dehydrogenase 14
87. SMAD9 ENSGALG00000017050 11 0.946 - - - - - 0.946 - - - - SMAD family member 9 [Source:NCBI gene;Acc:395543]
88. FGFBP2 ENSGALG00000014501 12 0.946 - - - - - 0.946 - - - - fibroblast growth factor binding protein 2 [Source:NCBI gene;Acc:395094]
89. COL15A1 ENSGALG00000034119 9 0.946 - - - - - 0.946 - - - - collagen type XV alpha 1 chain, transcript variant X6
90. RASSF7 ENSGALG00000044251 8 0.946 - - - - - 0.946 - - - - Ras association domain family member 7 [Source:HGNC Symbol;Acc:HGNC:1166]
91. SEC61A1 ENSGALG00000005966 9 0.946 - - - - - 0.946 - - - - Sec61 translocon alpha 1 subunit [Source:HGNC Symbol;Acc:HGNC:18276]
92. AMH ENSGALG00000036346 16 0.946 - - - - - 0.946 - - - - anti-Mullerian hormone [Source:NCBI gene;Acc:395887]
93. ST8SIA6 ENSGALG00000008671 8 0.946 - - - - - 0.946 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:NCBI gene;Acc:414335]
94. ENSGALG00000005498 ENSGALG00000005498 11 0.946 - - - - - 0.946 - - - -
95. gga-mir-92-2 ENSGALG00000025998 2 0.946 - - - - - 0.946 - - - - gga-mir-92-2 [Source:miRBase;Acc:MI0029335]
96. KIAA0195 KIAA0195 48 0.946 - - - - - 0.946 - - - -
97. LOC426355 ENSGALG00000028985 3 0.946 - - - - - 0.946 - - - - t-SNARE domain-containing protein 1-like, transcript variant X2
98. Sep-12 Sep-12 4 0.946 - - - - - 0.946 - - - -
99. PVRL1 PVRL1 3 0.946 - - - - - 0.946 - - - -
100. ATP6V1H ENSGALG00000013621 13 0.946 - - - - - 0.946 - - - - ATPase H+ transporting V1 subunit H [Source:NCBI gene;Acc:426199]

There are 366 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA