Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRAM1

Gene Name Gene ID Reads Annotation
TRAM1 ENSGALG00000041112 22876 translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]











Genes with expression patterns similar to TRAM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRAM1 ENSGALG00000041112 22876 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
2. LAP3 ENSGALG00000006334 21076 2.587 - - - - 0.934 - 0.924 0.729 - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
3. SOD2 ENSGALG00000011661 13178 1.918 - - - - 0.977 - 0.941 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
4. MAP1LC3A ENSGALG00000038721 2230 1.895 - - - - 0.970 - 0.925 - - - microtubule associated protein 1 light chain 3 alpha
5. EIF4G3 ENSGALG00000010084 5881 1.879 - - - - 0.955 - 0.924 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
6. DYNC1LI1 ENSGALG00000011491 11011 1.85 - - - - 0.936 - 0.914 - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
7. CCNYL1 ENSGALG00000008485 11958 1.824 - - - - 0.957 - - 0.867 - - cyclin Y like 1
8. MRPL19 ENSGALG00000016731 22670 1.782 - - - - 0.868 - 0.914 - - - mitochondrial ribosomal protein L19, transcript variant X1
9. DISP1 3281 1.77 - - - - - - 0.910 0.860 - - dispatched RND transporter family member 1, transcript variant X3
10. TM9SF3 ENSGALG00000005534 15290 1.768 - - - - - - 0.951 0.817 - - transmembrane 9 superfamily member 3
11. BCCIP ENSGALG00000006617 13291 1.761 - - - - 0.913 - - 0.848 - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
12. SRSF6 ENSGALG00000000990 12424 1.76 - - - - 0.952 - - 0.808 - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
13. LSM6 ENSGALG00000009985 18582 1.639 - - - - 0.933 - - 0.706 - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
14. GOLGA7 ENSGALG00000003483 26525 1.628 - - - - 0.898 - - 0.730 - - golgin A7 [Source:NCBI gene;Acc:426787]
15. PEBP1 ENSGALG00000007403 77502 1.517 - - - - 0.704 - 0.813 - - - phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
16. SUGT1 ENSGALG00000016946 22881 0.979 - - - - 0.979 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
17. SH3GLB1 ENSGALG00000006284 12764 0.977 - - - - 0.977 - - - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
18. GCLM ENSGALG00000005782 15789 0.975 - - - - - - 0.975 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
19. TIMM21 ENSGALG00000013709 3215 0.975 - - - - 0.975 - - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
20. CRIPT ENSGALG00000010014 4311 0.973 - - - - 0.973 - - - - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
21. CDR2L ENSGALG00000026295 4142 0.973 - - - - 0.973 - - - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
22. COPG2 ENSGALG00000008144 4542 0.972 - - - - 0.972 - - - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
23. MPPED1 ENSGALG00000014186 5726 0.972 - - - - 0.972 - - - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
24. RBM15B 5416 0.972 - - - - 0.972 - - - - - RNA binding motif protein 15B
25. MXD4 ENSGALG00000015688 1472 0.972 - - - - 0.972 - - - - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
26. ENSGALG00000005720 ENSGALG00000005720 1666 0.971 - - - - 0.971 - - - - -
27. PIK3CD ENSGALG00000002583 1036 0.971 - - - - 0.971 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:NCBI gene;Acc:419444]
28. TMEM167A ENSGALG00000027332 13862 0.971 - - - - 0.971 - - - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
29. AEN ENSGALG00000044204 2633 0.97 - - - - 0.970 - - - - - apoptosis enhancing nuclease, transcript variant X1
30. FAM18B1 ENSGALG00000001335 5177 0.97 - - - - 0.970 - - - - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
31. FBXW7 ENSGALG00000010103 5982 0.97 - - - - 0.970 - - - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
32. NOL12 ENSGALG00000012410 5658 0.97 - - - - 0.970 - - - - - nucleolar protein 12
33. PCIF1 ENSGALG00000023547 867 0.969 - - - - 0.969 - - - - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
34. PDXP ENSGALG00000023131 2663 0.969 - - - - 0.969 - - - - - pyridoxal phosphatase [Source:HGNC Symbol;Acc:HGNC:30259]
35. RSU1 ENSGALG00000040891 12561 0.969 - - - - 0.969 - - - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
36. RHBDF1 ENSGALG00000007434 2359 0.969 - - - - 0.969 - - - - - rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]
37. TMEM65 ENSGALG00000037371 776 0.969 - - - - 0.969 - - - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
38. MAP3K13 ENSGALG00000006655 632 0.969 - - - - 0.969 - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
39. FOCAD ENSGALG00000015071 3677 0.969 - - - - 0.969 - - - - - focadhesin [Source:NCBI gene;Acc:427233]
40. KAT6A ENSGALG00000003641 2631 0.968 - - - - 0.968 - - - - - lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
41. GPALPP1 ENSGALG00000031567 4221 0.968 - - - - 0.968 - - - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
42. LSMD1 LSMD1 2562 0.968 - - - - 0.968 - - - - -
43. MRPL32 ENSGALG00000037258 6861 0.968 - - - - 0.968 - - - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
44. C9orf89 C9orf89 3056 0.967 - - - - 0.967 - - - - -
45. CNOT2 ENSGALG00000010042 7612 0.967 - - - - 0.967 - - - - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
46. MTG1 ENSGALG00000003549 5032 0.966 - - - - 0.966 - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
47. CSNK1E ENSGALG00000032257 2165 0.966 - - - - 0.966 - - - - - casein kinase 1 epsilon [Source:NCBI gene;Acc:378891]
48. BTBD7 4136 0.966 - - - - 0.966 - - - - - BTB domain containing 7, transcript variant X2
49. TLK1 ENSGALG00000009569 5446 0.966 - - - - 0.966 - - - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
50. CLSPN ENSGALG00000002346 2590 0.966 - - - - 0.966 - - - - - claspin [Source:NCBI gene;Acc:428223]
51. HABP4 ENSGALG00000012628 2894 0.966 - - - - 0.966 - - - - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
52. SRP68 ENSGALG00000002062 7370 0.965 - - - - 0.965 - - - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
53. DARS ENSGALG00000012355 2887 0.965 - - - - 0.965 - - - - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
54. TXNDC9 ENSGALG00000032090 6804 0.965 - - - - 0.965 - - - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
55. AIP ENSGALG00000040247 4166 0.965 - - - - 0.965 - - - - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
56. DRG1 ENSGALG00000006921 10791 0.964 - - - - 0.964 - - - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
57. NMT1 ENSGALG00000000857 5770 0.964 - - - - 0.964 - - - - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
58. TPP2 ENSGALG00000016865 7509 0.964 - - - - 0.964 - - - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
59. BRCC3 ENSGALG00000005383 4844 0.964 - - - - 0.964 - - - - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
60. ITPK1 ENSGALG00000034898 4212 0.964 - - - - 0.964 - - - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
61. KDM1A ENSGALG00000033469 20632 0.964 - - - - 0.964 - - - - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
62. MANF ENSGALG00000002362 7518 0.963 - - - - 0.963 - - - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
63. ADSL ENSGALG00000012034 10280 0.963 - - - - 0.963 - - - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
64. gga-mir-1778 ENSGALG00000025181 8765 0.962 - - - - 0.962 - - - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
65. TIA1 ENSGALG00000013879 16330 0.961 - - - - 0.961 - - - - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]
66. LFNG ENSGALG00000038515 5178 0.961 - - - - 0.961 - - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
67. B4GAL-T7 B4GAL-T7 12356 0.961 - - - - 0.961 - - - - -
68. CKAP5 ENSGALG00000008325 8494 0.961 - - - - 0.961 - - - - - cytoskeleton associated protein 5 [Source:NCBI gene;Acc:423190]
69. PAXIP1 ENSGALG00000036064 3120 0.96 - - - - 0.960 - - - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
70. TDRD3 ENSGALG00000016936 3412 0.96 - - - - 0.960 - - - - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
71. ZNF326 ENSGALG00000006113 15141 0.959 - - - - 0.959 - - - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
72. GLB1L2 ENSGALG00000001604 4057 0.958 - - - - 0.958 - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
73. WSB2 ENSGALG00000008151 13246 0.958 - - - - 0.958 - - - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
74. MOCS2 ENSGALG00000014906 4974 0.958 - - - - 0.958 - - - - - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
75. MAP2K4 ENSGALG00000032178 5982 0.957 - - - - 0.957 - - - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
76. FOXK2 ENSGALG00000001577 6346 0.957 - - - - 0.957 - - - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
77. SMS ENSGALG00000016379 11607 0.957 - - - - 0.957 - - - - - spermine synthase [Source:NCBI gene;Acc:418602]
78. ANXA11 ENSGALG00000043826 5189 0.955 - - - - 0.955 - - - - - annexin A11 [Source:NCBI gene;Acc:423637]
79. SDF4 ENSGALG00000001872 6382 0.954 - - - - - - 0.954 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
80. UTP15 ENSGALG00000013510 13122 0.953 - - - - 0.953 - - - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
81. OCIAD1 ENSGALG00000014081 12065 0.953 - - - - 0.953 - - - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
82. COPA ENSGALG00000009153 11618 0.952 - - - - 0.952 - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
83. NCOA4 ENSGALG00000002066 10544 0.952 - - - - - - 0.952 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
84. SFRP2 ENSGALG00000009241 4716 0.951 - - - - 0.951 - - - - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
85. NDUFA9 ENSGALG00000017282 14358 0.951 - - - - - - 0.951 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
86. COPB2 ENSGALG00000005357 15208 0.95 - - - - 0.950 - - - - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
87. NDUFB4 ENSGALG00000027688 8951 0.95 - - - - 0.950 - - - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
88. RBM12B ENSGALG00000035129 4314 0.95 - - - - - - 0.950 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
89. RILPL2 ENSGALG00000003321 5632 0.949 - - - - - - 0.949 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
90. BPTF ENSGALG00000038222 7521 0.949 - - - - - - 0.949 - - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
91. RNF11 ENSGALG00000010539 8617 0.949 - - - - 0.949 - - - - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
92. WDR36 ENSGALG00000000247 11277 0.949 - - - - 0.949 - - - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
93. RBM5 30998 0.948 - - - - 0.948 - - - - - RNA binding motif protein 5, transcript variant X1
94. DIABLO ENSGALG00000004412 9499 0.948 - - - - 0.948 - - - - - diablo IAP-binding mitochondrial protein, transcript variant X3
95. DECR1 ENSGALG00000036990 6360 0.948 - - - - 0.948 - - - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
96. ASPM ENSGALG00000032398 12784 0.948 - - - - 0.948 - - - - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
97. POLR3E ENSGALG00000007008 4010 0.946 - - - - - - 0.946 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
98. SIRT1 ENSGALG00000002761 9028 0.943 - - - - - - 0.943 - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
99. AP2B1 ENSGALG00000042125 13229 0.942 - - - - - - 0.942 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
100. ADH5 ENSGALG00000012245 38217 0.942 - - - - - - 0.942 - - - alcohol dehydrogenase 5 (class III), chi polypeptide [Source:NCBI gene;Acc:422705]

There are 306 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA