Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRAIP

Gene Name Gene ID Reads Annotation
TRAIP ENSGALG00000002908 6901 TRAF interacting protein [Source:NCBI gene;Acc:415927]











Genes with expression patterns similar to TRAIP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRAIP ENSGALG00000002908 6901 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TRAF interacting protein [Source:NCBI gene;Acc:415927]
2. COG2 ENSGALG00000011114 522 1.487 - - - - - - - 0.718 - 0.769 component of oligomeric golgi complex 2 [Source:HGNC Symbol;Acc:HGNC:6546]
3. SLC7A2 ENSGALG00000013627 58 0.929 - - - - - - - - - 0.929 solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
4. RAD1 ENSGALG00000003365 1417 0.922 - - - - - - - - - 0.922 RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]
5. ZMYND10 ENSGALG00000035883 58 0.92 - - - - - - - - - 0.920 zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
6. TBX5 ENSGALG00000008253 820 0.918 - - - - - - - - - 0.918 T-box 5 [Source:NCBI gene;Acc:373988]
7. SRRD ENSGALG00000005614 234 0.918 - - - - - - - - - 0.918 SRR1 domain containing [Source:NCBI gene;Acc:416908]
8. BOK ENSGALG00000005772 117 0.917 - - - - - - - - - 0.917 BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
9. TRMT61A ENSGALG00000011522 14 0.916 - - - - - - - - - 0.916 tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
10. NME6 ENSGALG00000038044 1231 0.916 - - - - - - - - - 0.916 NME/NM23 nucleoside diphosphate kinase 6
11. C3orf58 ENSGALG00000002347 27 0.915 - - - - - - - - - 0.915 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
12. TNFAIP3 ENSGALG00000013861 11 0.914 - - - - - - - - - 0.914 TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
13. NMBR ENSGALG00000013813 15 0.914 - - - - - - - - - 0.914 neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
14. gga-mir-6544 ENSGALG00000027916 19 0.914 - - - - - - - - - 0.914 gga-mir-6544 [Source:miRBase;Acc:MI0022360]
15. TRAF-5 TRAF-5 102 0.909 - - - - - - - - - 0.909
16. AKAP11 ENSGALG00000022739 82 0.909 - - - - - - - - - 0.909 A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
17. TRAK2 ENSGALG00000008370 46 0.908 - - - - - - - - - 0.908 trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
18. PHF11 ENSGALG00000019094 770 0.907 - - - - - - - - - 0.907 PHD finger protein 11 [Source:HGNC Symbol;Acc:HGNC:17024]
19. TNFAIP2 ENSGALG00000011446 32 0.907 - - - - - - - - - 0.907 TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
20. KAT6B ENSGALG00000005035 301 0.906 - - - - - - - - - 0.906 lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
21. SMEK1 SMEK1 95 0.903 - - - - - - - - - 0.903
22. TNN ENSGALG00000004538 21 0.903 - - - - - - - - - 0.903 tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
23. SLC20A1 ENSGALG00000013740 40 0.903 - - - - - - - - - 0.903 solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
24. ERRFI1 ENSGALG00000000535 83 0.903 - - - - - - - - - 0.903 ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
25. CLIC3 ENSGALG00000038789 233 0.902 - - - - - - - - - 0.902 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
26. KIAA0895 ENSGALG00000036301 280 0.901 - - - - - - - - - 0.901 KIAA0895 [Source:HGNC Symbol;Acc:HGNC:22206]
27. GSS ENSGALG00000003281 57 0.9 - - - - - - - - - 0.900 glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
28. MYCN ENSGALG00000016462 1930 0.9 - - - - - - - - - 0.900 MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
29. ING5 ENSGALG00000006317 149 0.899 - - - - - - - - - 0.899 inhibitor of growth family member 5 [Source:NCBI gene;Acc:424852]
30. TM6SF1 ENSGALG00000006027 20 0.897 - - - - - - - - - 0.897 transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]
31. SENP7 ENSGALG00000044642 48 0.897 - - - - - - - - - 0.897 SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
32. PKD2 ENSGALG00000010921 55 0.893 - - - - - - - - - 0.893 polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
33. INADL INADL 51 0.892 - - - - - - - - - 0.892
34. SMOC2 ENSGALG00000011205 340 0.891 - - - - - - - - - 0.891 SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
35. ROGDI ENSGALG00000001841 313 0.89 - - - - - - - - - 0.890 rogdi homolog [Source:HGNC Symbol;Acc:HGNC:29478]
36. TMEM200B ENSGALG00000024318 117 0.89 - - - - - - - - - 0.890 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
37. OSBPL2 ENSGALG00000005195 94 0.889 - - - - - - - - - 0.889 oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
38. TRMT11 ENSGALG00000014831 305 0.888 - - - - - - - - - 0.888 tRNA methyltransferase 11 homolog [Source:NCBI gene;Acc:378793]
39. FAM154B FAM154B 175 0.888 - - - - - - - - - 0.888
40. ZNF385B ENSGALG00000009012 290 0.888 - - - - - - - - - 0.888 zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
41. TUSC1 22 0.884 - - - - - - - - - 0.884 tumor suppressor candidate 1
42. BMP2K ENSGALG00000010885 37 0.884 - - - - - - - - - 0.884 BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
43. KCNB1 ENSGALG00000004758 620 0.883 - - - - - - - - - 0.883 potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
44. ELOVL1 ENSGALG00000009988 4000 0.882 - - - - - - - - - 0.882 ELOVL fatty acid elongase 1 [Source:NCBI gene;Acc:424564]
45. TMEM116 ENSGALG00000004760 217 0.881 - - - - - - - - - 0.881 transmembrane protein 116 [Source:HGNC Symbol;Acc:HGNC:25084]
46. KIF24 ENSGALG00000005806 124 0.88 - - - - - - - - - 0.880 kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]
47. ZEB2 ENSGALG00000040465 315 0.876 - - - - - - - - - 0.876 Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
48. PDE3A ENSGALG00000013143 28 0.874 - - - - - - - - - 0.874 phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
49. SLC30A9 ENSGALG00000031415 36 0.873 - - - - - - - - - 0.873 solute carrier family 30 member 9
50. FAM192A ENSGALG00000021473 10213 0.871 - - - - - - - - - 0.871 family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
51. SRR ENSGALG00000003155 93 0.869 - - - - - - - - - 0.869 serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
52. LMBR1 ENSGALG00000030379 29 0.869 - - - - - - - - - 0.869 limb development membrane protein 1 [Source:NCBI gene;Acc:373986]
53. KCNB2 ENSGALG00000031693 31 0.868 - - - - - - - - - 0.868 potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
54. SERAC1 ENSGALG00000013732 24 0.867 - - - - - - - - - 0.867 serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
55. TDRD9 ENSGALG00000011565 146 0.864 - - - - - - - - - 0.864 tudor domain containing 9 [Source:HGNC Symbol;Acc:HGNC:20122]
56. TGFBRAP1 ENSGALG00000016795 81 0.862 - - - - - - - - - 0.862 transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
57. COQ2 ENSGALG00000041294 25 0.862 - - - - - - - - - 0.862 coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
58. PXK ENSGALG00000007052 121 0.859 - - - - - - - - - 0.859 PX domain containing serine/threonine kinase like [Source:HGNC Symbol;Acc:HGNC:23326]
59. MYH11 ENSGALG00000006520 166 0.853 - - - - - - - - - 0.853 myosin, heavy chain 11, smooth muscle [Source:NCBI gene;Acc:396211]
60. BLOC1S2 ENSGALG00000005794 544 0.853 - - - - - - - - - 0.853 biogenesis of lysosomal organelles complex 1 subunit 2 [Source:NCBI gene;Acc:423768]
61. ENSGALG00000019522 ENSGALG00000019522 122 0.851 - - - - - - - - - 0.851
62. HS1BP3 ENSGALG00000016486 380 0.85 - - - - - - - - - 0.850 HCLS1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24979]
63. FAM117B ENSGALG00000008466 81 0.85 - - - - - - - - - 0.850 family with sequence similarity 117 member B [Source:HGNC Symbol;Acc:HGNC:14440]
64. PTPN2 ENSGALG00000013867 1128 0.849 - - - - - - - - - 0.849 protein tyrosine phosphatase, non-receptor type 2 [Source:NCBI gene;Acc:396409]
65. RAD23B ENSGALG00000015540 10828 0.848 - - - - - - - - - 0.848 RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
66. WDYHV1 ENSGALG00000030059 2961 0.845 - - - - - - - - - 0.845 WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
67. CRAT ENSGALG00000037443 78 0.842 - - - - - - - - - 0.842 carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
68. C10orf88 ENSGALG00000000011 6026 0.842 - - - - - - - - - 0.842 chromosome 10 open reading frame 88 [Source:HGNC Symbol;Acc:HGNC:25822]
69. CREB5 ENSGALG00000038265 92 0.841 - - - - - - - - - 0.841 cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
70. JMJD1C ENSGALG00000002942 4556 0.841 - - - - - - - - - 0.841 jumonji domain containing 1C [Source:NCBI gene;Acc:423655]
71. STRIP1 ENSGALG00000037995 621 0.838 - - - - - - - - - 0.838 striatin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25916]
72. TPGS1 ENSGALG00000026780 688 0.837 - - - - - - - - - 0.837 tubulin polyglutamylase complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:25058]
73. DMXL1 ENSGALG00000002227 88 0.836 - - - - - - - - - 0.836 Dmx like 1 [Source:HGNC Symbol;Acc:HGNC:2937]
74. ENDOV 121 0.834 - - - - - - - - - 0.834 endonuclease V
75. FAM175B 3194 0.834 - - - - - - - - - 0.834 family with sequence similarity 175 member B, transcript variant X2
76. NR5A2 ENSGALG00000002182 392 0.833 - - - - - - - - - 0.833 nuclear receptor subfamily 5 group A member 2 [Source:NCBI gene;Acc:395961]
77. MRS2 ENSGALG00000040084 454 0.832 - - - - - - - - - 0.832 MRS2, magnesium transporter [Source:HGNC Symbol;Acc:HGNC:13785]
78. NAALAD2 202 0.832 - - - - - - - - - 0.832 N-acetylated alpha-linked acidic dipeptidase 2, transcript variant X1
79. MFSD2B ENSGALG00000016498 208 0.831 - - - - - - - - - 0.831 major facilitator superfamily domain containing 2B [Source:HGNC Symbol;Acc:HGNC:37207]
80. MPP3 ENSGALG00000042521 1372 0.831 - - - - - - - - - 0.831 membrane palmitoylated protein 3 [Source:HGNC Symbol;Acc:HGNC:7221]
81. MRM1 ENSGALG00000039523 2009 0.83 - - - - - - - - - 0.830 mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
82. ITM2B ENSGALG00000016996 1112 0.83 - - - - - - - - - 0.830 integral membrane protein 2B [Source:NCBI gene;Acc:395969]
83. NAPG ENSGALG00000013932 67 0.827 - - - - - - - - - 0.827 NSF attachment protein gamma [Source:HGNC Symbol;Acc:HGNC:7642]
84. LEO1 ENSGALG00000004696 111 0.825 - - - - - - - - - 0.825 LEO1 homolog, Paf1/RNA polymerase II complex component [Source:NCBI gene;Acc:769405]
85. TNFRSF11B ENSGALG00000043167 911 0.825 - - - - - - - - - 0.825 TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
86. ALDH6A1 ENSGALG00000010211 29 0.825 - - - - - - - - - 0.825 aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
87. MVP ENSGALG00000040471 1407 0.823 - - - - - - - - - 0.823 major vault protein [Source:NCBI gene;Acc:420049]
88. DAW1 ENSGALG00000002992 112 0.823 - - - - - - - - - 0.823 dynein assembly factor with WD repeats 1 [Source:HGNC Symbol;Acc:HGNC:26383]
89. ZNF341 ENSGALG00000002968 1028 0.822 - - - - - - - 0.822 - - zinc finger protein 341 [Source:NCBI gene;Acc:419152]
90. MAFK ENSGALG00000004189 1195 0.822 - - - - - - - - - 0.822 MAF bZIP transcription factor K [Source:NCBI gene;Acc:395518]
91. ANKRD49 ENSGALG00000017210 3247 0.818 - - - - - - 0.818 - - - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
92. FRRS1L ENSGALG00000025792 1754 0.817 - - - - - - - - - 0.817 ferric chelate reductase 1 like [Source:HGNC Symbol;Acc:HGNC:1362]
93. CRKL ENSGALG00000006390 702 0.815 - - - - - - - - - 0.815 CRK like proto-oncogene, adaptor protein [Source:HGNC Symbol;Acc:HGNC:2363]
94. CEP76 ENSGALG00000013858 1809 0.815 - - - - - - 0.815 - - - centrosomal protein 76
95. ATF2 ENSGALG00000009287 73 0.815 - - - - - - - - - 0.815 activating transcription factor 2 [Source:NCBI gene;Acc:395727]
96. THAP9 ENSGALG00000044141 1993 0.814 - - - - - - - - - 0.814 THAP domain containing 9 [Source:HGNC Symbol;Acc:HGNC:23192]
97. LRRIQ1 147 0.814 - - - - - - - - - 0.814 leucine rich repeats and IQ motif containing 1, transcript variant X2
98. LRRC42 ENSGALG00000010743 384 0.812 - - - - - - - - - 0.812 leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
99. MMRN2 770 0.811 - - - - - - - - - 0.811 multimerin 2, transcript variant X1
100. MIA3 ENSGALG00000041034 2038 0.809 - - - - - - - - - 0.809 MIA family member 3, ER export factor [Source:NCBI gene;Acc:421337]

There are 237 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA