Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRAFD1

Gene Name Gene ID Reads Annotation
TRAFD1 ENSGALG00000043208 1009 TRAF-type zinc finger domain containing 1 [Source:NCBI gene;Acc:416884]











Genes with expression patterns similar to TRAFD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRAFD1 ENSGALG00000043208 1009 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TRAF-type zinc finger domain containing 1 [Source:NCBI gene;Acc:416884]
2. FAM92A1 FAM92A1 511 1.726 - - - - - - - 0.995 0.731 -
3. EARS2 ENSGALG00000006122 2072 1.698 - - - - - - - 0.893 0.805 - glutamyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:427672]
4. SLC16A9 ENSGALG00000003172 266 0.996 - - - - - - - 0.996 - - solute carrier family 16 member 9 [Source:NCBI gene;Acc:423667]
5. SMPDL3B ENSGALG00000000737 223 0.995 - - - - - - - 0.995 - - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
6. KIAA1239 KIAA1239 263 0.995 - - - - - - - 0.995 - -
7. DCUN1D2 ENSGALG00000029145 2414 0.995 - - - - - - - 0.995 - - defective in cullin neddylation 1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20328]
8. ARHGAP12 ENSGALG00000007254 479 0.995 - - - - - - - 0.995 - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
9. KAT6B ENSGALG00000005035 301 0.995 - - - - - - - 0.995 - - lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
10. ZNF142 ENSGALG00000011393 2078 0.995 - - - - - - - 0.995 - - zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
11. PIBPPDD4L ENSGALG00000003345 1689 0.995 - - - - - - - 0.995 - - 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4-like
12. DAB1 ENSGALG00000010857 1085 0.994 - - - - - - - 0.994 - - DAB1, reelin adaptor protein [Source:NCBI gene;Acc:374083]
13. MACF1 ENSGALG00000003693 1043 0.994 - - - - - - - 0.994 - - microtubule-actin crosslinking factor 1 [Source:HGNC Symbol;Acc:HGNC:13664]
14. ABCE1 ENSGALG00000009961 958 0.994 - - - - - - - 0.994 - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
15. CHTF18 ENSGALG00000040157 2140 0.994 - - - - - - - 0.994 - - chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:416531]
16. ENSGALG00000003847 ENSGALG00000003847 1220 0.994 - - - - - - - 0.994 - -
17. SMPD2 ENSGALG00000033245 462 0.993 - - - - - - - 0.993 - - sphingomyelin phosphodiesterase 2 [Source:HGNC Symbol;Acc:HGNC:11121]
18. ZNF652 ENSGALG00000001279 1188 0.993 - - - - - - - 0.993 - - zinc finger protein 652 [Source:HGNC Symbol;Acc:HGNC:29147]
19. SUV420H1 SUV420H1 2361 0.992 - - - - - - - 0.992 - -
20. MCAT ENSGALG00000034275 4598 0.992 - - - - - - - 0.992 - - malonyl-CoA-acyl carrier protein transacylase [Source:HGNC Symbol;Acc:HGNC:29622]
21. LGALS1_1 ENSGALG00000012420 1560 0.991 - - - - - - - 0.991 - - galectin 1 [Source:NCBI gene;Acc:396491]
22. FER1L6 ENSGALG00000033783 196 0.991 - - - - - - - 0.991 - - fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
23. STAU2 ENSGALG00000031390 2008 0.991 - - - - - - - 0.991 - - staufen double-stranded RNA binding protein 2 [Source:NCBI gene;Acc:420184]
24. NUDT4 ENSGALG00000011285 2998 0.99 - - - - - - - 0.990 - - nudix hydrolase 4, transcript variant X5
25. NF1 ENSGALG00000005660 1610 0.99 - - - - - - - 0.990 - - neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]
26. ATG2B ENSGALG00000042088 918 0.988 - - - - - - - 0.988 - - autophagy related 2B [Source:HGNC Symbol;Acc:HGNC:20187]
27. WDYHV1 ENSGALG00000030059 2961 0.987 - - - - - - - 0.987 - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
28. PARPBP ENSGALG00000012756 1895 0.987 - - - - - - - 0.987 - - PARP1 binding protein [Source:NCBI gene;Acc:418092]
29. MED12L ENSGALG00000010370 765 0.987 - - - - - - - 0.987 - - mediator complex subunit 12 like [Source:HGNC Symbol;Acc:HGNC:16050]
30. MST4 MST4 1931 0.986 - - - - - - - 0.986 - -
31. HNMT ENSGALG00000012377 227 0.985 - - - - - - - 0.985 - - histamine N-methyltransferase [Source:NCBI gene;Acc:424298]
32. CLCN7 ENSGALG00000030826 3173 0.985 - - - - - - - 0.985 - - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
33. SURF1 ENSGALG00000033754 2130 0.985 - - - - - - - 0.985 - - SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]
34. FAF1 ENSGALG00000010536 1522 0.984 - - - - - - - 0.984 - - Fas associated factor 1 [Source:HGNC Symbol;Acc:HGNC:3578]
35. OFD1 ENSGALG00000016576 1916 0.984 - - - - - - - 0.984 - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
36. MICU1 ENSGALG00000004372 1978 0.983 - - - - - - - 0.983 - - mitochondrial calcium uptake 1 [Source:HGNC Symbol;Acc:HGNC:1530]
37. ZBTB24 ENSGALG00000015231 1384 0.982 - - - - - - - 0.982 - - zinc finger and BTB domain containing 24 [Source:HGNC Symbol;Acc:HGNC:21143]
38. CMTM7 ENSGALG00000011488 1406 0.979 - - - - - - - 0.979 - - CKLF like MARVEL transmembrane domain containing 7 [Source:NCBI gene;Acc:420666]
39. POLD3 ENSGALG00000017307 2136 0.979 - - - - - - - 0.979 - - DNA polymerase delta 3, accessory subunit [Source:NCBI gene;Acc:419053]
40. PRKAB2 ENSGALG00000001678 1999 0.979 - - - - - - - 0.979 - - protein kinase AMP-activated non-catalytic subunit beta 2 [Source:NCBI gene;Acc:427017]
41. SNTB1 ENSGALG00000034528 3907 0.978 - - - - - - - 0.978 - - syntrophin beta 1 [Source:NCBI gene;Acc:404774]
42. CLUAP1 ENSGALG00000030877 4269 0.978 - - - - - - - 0.978 - - clusterin associated protein 1 [Source:NCBI gene;Acc:426077]
43. ANO6 ENSGALG00000009638 470 0.976 - - - - - - - 0.976 - - anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
44. OSR1 ENSGALG00000016473 1202 0.975 - - - - - - - 0.975 - - odd-skipped related transciption factor 1 [Source:HGNC Symbol;Acc:HGNC:8111]
45. CUL5 ENSGALG00000017165 2480 0.974 - - - - - - - 0.974 - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
46. KIF25 ENSGALG00000011299 2601 0.972 - - - - - - - 0.972 - - kinesin family member 25 [Source:HGNC Symbol;Acc:HGNC:6390]
47. ENSGALG00000009863 ENSGALG00000009863 7375 0.971 - - - - - - - 0.971 - -
48. GNPAT ENSGALG00000011163 4286 0.97 - - - - - - - 0.970 - - glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]
49. NAPEPLD ENSGALG00000008285 1295 0.97 - - - - - - - 0.970 - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
50. MPP5 ENSGALG00000009581 724 0.969 - - - - - - - 0.969 - - membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
51. TAF1B ENSGALG00000016437 2318 0.967 - - - - - - - 0.967 - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
52. ENSGALG00000017324 ENSGALG00000017324 8235 0.966 - - - - - - - 0.966 - -
53. LSMD1 LSMD1 2562 0.965 - - - - - - - 0.965 - -
54. GTF2H4 GTF2H4 5227 0.964 - - - - - - - 0.964 - -
55. DMTF1 ENSGALG00000030844 3584 0.964 - - - - - - - 0.964 - - cyclin D binding myb like transcription factor 1 [Source:NCBI gene;Acc:418646]
56. RPS6KA RPS6KA 6745 0.964 - - - - - - - 0.964 - -
57. STX16 ENSGALG00000007541 6458 0.961 - - - - - - - 0.961 - - syntaxin 16 [Source:NCBI gene;Acc:419315]
58. SUN1 ENSGALG00000003781 3442 0.961 - - - - - - - 0.961 - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
59. MKP3 MKP3 4418 0.959 - - - - - - - 0.959 - -
60. C1orf50 ENSGALG00000004800 4894 0.956 - - - - - - - 0.956 - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
61. TMEM33 ENSGALG00000014248 6069 0.956 - - - - - - - 0.956 - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
62. TRIP11 ENSGALG00000010763 3146 0.953 - - - - - - - 0.953 - - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
63. PPM1B ENSGALG00000030691 4513 0.951 - - - - - - - 0.951 - - protein phosphatase, Mg2+/Mn2+ dependent 1B [Source:NCBI gene;Acc:421404]
64. VWF ENSGALG00000017272 1012 0.951 - - - - - - - 0.951 - - Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
65. OSBPL1A ENSGALG00000015086 2702 0.943 - - - - - - - 0.943 - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
66. USP12P1 USP12P1 4193 0.94 - - - - - - - 0.940 - -
67. ZMYM3 ENSGALG00000005533 2927 0.94 - - - - - - - 0.940 - - zinc finger MYM-type containing 3 [Source:HGNC Symbol;Acc:HGNC:13054]
68. PLA2G12A ENSGALG00000012185 5261 0.939 - - - - - - - 0.939 - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
69. FBXW5 ENSGALG00000030831 5927 0.939 - - - - - - - 0.939 - - F-box and WD repeat domain containing 5 [Source:NCBI gene;Acc:417289]
70. ESRRG ENSGALG00000009645 2783 0.935 - - - - - - - 0.935 - - estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
71. CENPI ENSGALG00000005038 2608 0.932 - - - - - - - 0.932 - - centromere protein I [Source:NCBI gene;Acc:395207]
72. PRRG1 ENSGALG00000016266 3473 0.927 - - - - - - - 0.927 - - proline rich and Gla domain 1 [Source:NCBI gene;Acc:418582]
73. XRCC3 ENSGALG00000011533 3768 0.922 - - - - - - - 0.922 - - X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
74. TMEM185A ENSGALG00000009139 4424 0.919 - - - - - - - 0.919 - - transmembrane protein 185A [Source:HGNC Symbol;Acc:HGNC:17125]
75. PDGF-A PDGF-A 5166 0.915 - - - - - - - 0.915 - -
76. SEMA6D ENSGALG00000030542 3780 0.914 - - - - - - - 0.914 - - semaphorin 6D [Source:HGNC Symbol;Acc:HGNC:16770]
77. MAP3K4 ENSGALG00000020003 6378 0.912 - - - - - - - 0.912 - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
78. SIPA1L2 ENSGALG00000037506 3651 0.907 - - - - - - - 0.907 - - signal induced proliferation associated 1 like 2 [Source:HGNC Symbol;Acc:HGNC:23800]
79. TTPAL ENSGALG00000004244 2734 0.906 - - - - - - - 0.906 - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
80. gga-mir-1737 ENSGALG00000025206 3910 0.903 - - - - - - - 0.903 - - gga-mir-1737 [Source:miRBase;Acc:MI0007476]
81. LAMB1 ENSGALG00000007905 7737 0.9 - - - - - - - 0.900 - - laminin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6486]
82. TNNC1 ENSGALG00000001459 7110 0.9 - - - - - - - 0.900 - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
83. DNA2 ENSGALG00000004037 5426 0.894 - - - - - - - 0.894 - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
84. UHMK1 ENSGALG00000002734 2308 0.892 - - - - - - - 0.892 - - U2AF homology motif kinase 1 [Source:HGNC Symbol;Acc:HGNC:19683]
85. GTPBP2 ENSGALG00000010315 1170 0.891 - - - - - - - 0.891 - - GTP binding protein 2
86. CHMP2B ENSGALG00000015496 3973 0.891 - - - - - - - 0.891 - - charged multivesicular body protein 2B [Source:NCBI gene;Acc:418461]
87. SERINC1 ENSGALG00000014868 12484 0.888 - - - - - - - 0.888 - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
88. SMARCD2 ENSGALG00000029304 11867 0.886 - - - - - - - 0.886 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
89. C10ORF58 C10ORF58 5045 0.885 - - - - - - - 0.885 - -
90. COG5 ENSGALG00000042764 4205 0.885 - - - - - - - 0.885 - - component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
91. RGN ENSGALG00000016724 3184 0.883 - - - - - - - 0.883 - - regucalcin [Source:NCBI gene;Acc:395480]
92. RHPN2 ENSGALG00000004814 1865 0.879 - - - - - - - 0.879 - - rhophilin Rho GTPase binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19974]
93. E4F1 ENSGALG00000005900 1814 0.874 - - - - - - - 0.874 - - E4F transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3121]
94. ATAD2 ENSGALG00000034348 4440 0.872 - - - - - - - 0.872 - - ATPase family, AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]
95. TST ENSGALG00000012488 5314 0.868 - - - - - - - 0.868 - - thiosulfate sulfurtransferase [Source:NCBI gene;Acc:418049]
96. DOK5 ENSGALG00000007786 1732 0.868 - - - - - - - - 0.868 - docking protein 5 [Source:HGNC Symbol;Acc:HGNC:16173]
97. TTC32 ENSGALG00000016476 2962 0.867 - - - - - - - 0.867 - - tetratricopeptide repeat domain 32 [Source:HGNC Symbol;Acc:HGNC:32954]
98. CNEP1R1 ENSGALG00000029793 6536 0.866 - - - - - - - 0.866 - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:NCBI gene;Acc:415736]
99. gga-mir-6596 ENSGALG00000026117 2893 0.866 - - - - - - - 0.866 - - gga-mir-6596 [Source:miRBase;Acc:MI0022416]
100. AP3D1 ENSGALG00000000996 16143 0.866 - - - - - - - 0.866 - - adaptor related protein complex 3 delta 1 subunit, transcript variant X2

There are 124 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA