Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRAF6

Gene Name Gene ID Reads Annotation
TRAF6 ENSGALG00000007932 12 TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]











Genes with expression patterns similar to TRAF6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRAF6 ENSGALG00000007932 12 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
2. ANKRD31 46 2.497 - - - - - 0.767 - 1.000 - 0.730 ankyrin repeat domain 31, transcript variant X2
3. gga-mir-218-1 ENSGALG00000018327 3 2 - - - - - - - 1.000 - 1.000 gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
4. SUSD5 ENSGALG00000042289 1 2 - - 1.000 - - - - 1.000 - - sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]
5. IL18R1 ENSGALG00000040621 12 2 - - 1.000 - - - - 1.000 - - interleukin 18 receptor 1 [Source:NCBI gene;Acc:418717]
6. SPOCK3 ENSGALG00000009568 33 2 - - - - - - 1.000 1.000 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
7. COL4A3 ENSGALG00000038612 41 1.855 - - - - - - - 1.000 - 0.855 collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
8. HK3 ENSGALG00000027287 20 1.827 - - - - - - 0.827 1.000 - - hexokinase 3, transcript variant X3
9. COG3 ENSGALG00000016980 15 1.794 - - - - 0.794 - - 1.000 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
10. COTL1 ENSGALG00000017644 81 1.786 - - - - - 0.786 - 1.000 - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
11. PAPPA ENSGALG00000007079 6 1.786 - - - - - 0.786 - 1.000 - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
12. TOX3 ENSGALG00000034649 54 1.786 - - - - - 0.786 - 1.000 - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
13. DDTNFR23 ENSGALG00000006407 4 1.786 - - - - - 0.786 - 1.000 - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
14. FHDC1 ENSGALG00000041054 34 1.782 - - - - - 0.782 - 1.000 - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
15. ENSGALG00000028298 ENSGALG00000028298 34 1.777 - - - - - 0.777 - 1.000 - -
16. CD109 ENSGALG00000015910 11 1.554 - - - 0.840 - 0.714 - - - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
17. TCF20 ENSGALG00000011878 69 1 - - - - - - - 1.000 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
18. KIAA1755 3 1 - - - - - - - 1.000 - - KIAA1755 ortholog, transcript variant X2
19. PPIL6 ENSGALG00000015237 11 1 - - - - - - - 1.000 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
20. ABCC2 ENSGALG00000007395 1 1 - - 1.000 - - - - - - - ATP binding cassette subfamily C member 2, transcript variant X2
21. TPH1 ENSGALG00000006236 21 1 - - - - - - - 1.000 - - tryptophan hydroxylase 1 [Source:NCBI gene;Acc:395799]
22. UHRF1BP1L ENSGALG00000011557 17 1 - - - - - - - 1.000 - - UHRF1 binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:29102]
23. MGAT3 ENSGALG00000036743 5 1 - - - - - - - 1.000 - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
24. ID3 ENSGALG00000035317 52 1 - - - - - - - 1.000 - - inhibitor of DNA binding 3, HLH protein [Source:NCBI gene;Acc:395281]
25. PBEF1 PBEF1 25 1 - - - - - - - 1.000 - -
26. TNIK ENSGALG00000009298 38 1 - - - - - - 1.000 - - - TRAF2 and NCK interacting kinase [Source:HGNC Symbol;Acc:HGNC:30765]
27. MMP11 ENSGALG00000005968 3 1 - - - - - - - 1.000 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
28. CYP7B1 ENSGALG00000029435 3 1 - - - - - - - 1.000 - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
29. PKIA ENSGALG00000035525 20 1 - - - - - - 1.000 - - - protein kinase (cAMP-dependent, catalytic) inhibitor alpha [Source:NCBI gene;Acc:396333]
30. KNDC1 ENSGALG00000007007 31 1 - - - - - - - 1.000 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
31. C1orf116 ENSGALG00000001091 34 1 - - - - - - 1.000 - - - chromosome 1 open reading frame 116 [Source:HGNC Symbol;Acc:HGNC:28667]
32. CYBA ENSGALG00000029367 125 1 - - - - - - - 1.000 - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
33. VIT ENSGALG00000010583 16 1 - - - - - - - 1.000 - - vitrin [Source:NCBI gene;Acc:421471]
34. PTPRO ENSGALG00000013085 26 1 - - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
35. ADCY7 ENSGALG00000003837 10 1 - - - - - - - 1.000 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
36. AMER3 ENSGALG00000041501 5 1 - - - - - - - 1.000 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
37. PLEKHG3 ENSGALG00000036199 1 1 - - 1.000 - - - - - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
38. APOD ENSGALG00000006995 2 1 - - - - - - - 1.000 - - apolipoprotein D [Source:NCBI gene;Acc:424893]
39. TJP3 ENSGALG00000000748 45 1 - - - - - - 1.000 - - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
40. ENSGALG00000005482 ENSGALG00000005482 1 1 - - - - - - - 1.000 - -
41. RMST RMST 2 1 - - - - - - - 1.000 - -
42. ATMIN ENSGALG00000040475 16 1 - - - - - - - - - 1.000 ATM interactor [Source:HGNC Symbol;Acc:HGNC:29034]
43. SLC22A13 ENSGALG00000005934 8 1 - - - - 1.000 - - - - - solute carrier family 22 member 13
44. ENSGALG00000010218 ENSGALG00000010218 12 1 - - - - - - - 1.000 - -
45. USP19 ENSGALG00000006824 44 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
46. ADCY1 ENSGALG00000031170 4 1 - - - - - - - 1.000 - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
47. ARHGEF26 ENSGALG00000010352 3 1 - - 1.000 - - - - - - - Rho guanine nucleotide exchange factor 26 [Source:HGNC Symbol;Acc:HGNC:24490]
48. MAP2K1 ENSGALG00000007687 250 1 - - - - - - - 1.000 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
49. MAST3 ENSGALG00000003499 21 1 - - - - - - 1.000 - - - microtubule associated serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:19036]
50. RBM15 ENSGALG00000000401 22 1 - - - - - - - 1.000 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
51. FOXI1 ENSGALG00000002105 0 1 - - - - - - - 1.000 - - forkhead box I1 [Source:HGNC Symbol;Acc:HGNC:3815]
52. ALG12 ENSGALG00000008539 20 1 - - - - - - - 1.000 - - ALG12, alpha-1,6-mannosyltransferase [Source:NCBI gene;Acc:417733]
53. CD99L2 ENSGALG00000009075 5 1 - - - - - - - 1.000 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
54. MATN4 ENSGALG00000004028 15 1 - - 1.000 - - - - - - - matrilin 4 [Source:HGNC Symbol;Acc:HGNC:6910]
55. SLC6A6 ENSGALG00000006425 31 1 - - - - - - - 1.000 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
56. ENSGALG00000028964 ENSGALG00000028964 46 1 - - - - - - - 1.000 - -
57. AOC1 13 1 - - - - - - - 1.000 - - amine oxidase, copper containing 1, transcript variant X2
58. CREB3 ENSGALG00000002523 23 1 - - - - - - - 1.000 - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
59. ENSGALG00000021038 ENSGALG00000021038 1 1 - - 1.000 - - - - - - -
60. B2M ENSGALG00000002160 4 1 - - - - - - - 1.000 - - beta-2-microglobulin [Source:NCBI gene;Acc:414830]
61. ENSGALG00000001345 ENSGALG00000001345 5 1 - - - - - - - 1.000 - -
62. BTG4 ENSGALG00000007618 2 1 - - - - - - - 1.000 - - BTG anti-proliferation factor 4 [Source:NCBI gene;Acc:419781]
63. GUCY1B3 29 1 - - - - - - 1.000 - - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
64. ENSGALG00000000530 ENSGALG00000000530 3 1 - - 1.000 - - - - - - -
65. PPP1R1B ENSGALG00000044406 6 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
66. TLL2 ENSGALG00000005519 10 1 - - - - - - - 1.000 - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
67. FAM198B ENSGALG00000042411 65 1 - - - - - - - - - 1.000 family with sequence similarity 198 member B [Source:HGNC Symbol;Acc:HGNC:25312]
68. NLGN4 NLGN4 283 1 - - - - - - - 1.000 - -
69. gga-mir-6659 ENSGALG00000028216 6 1 - - - - - - - 1.000 - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
70. PRIMA1 ENSGALG00000020392 13 1 - - 1.000 - - - - - - - proline rich membrane anchor 1 [Source:NCBI gene;Acc:772317]
71. ENSGALG00000026654 ENSGALG00000026654 10 1 - - - - - - - 1.000 - -
72. SPG20 22 1 - - - - - - - 1.000 - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
73. MUT ENSGALG00000016697 43 1 - - - - - - - 1.000 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
74. MPV17L2 ENSGALG00000041429 168 1 - - - - - - - 1.000 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
75. ENSGALG00000014605 ENSGALG00000014605 1 1 - - - - - - - 1.000 - -
76. CBR4 ENSGALG00000009714 7 1 - - - - - - - 1.000 - - carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
77. KIAA1199 KIAA1199 6 1 - - - - - - - 1.000 - -
78. SKI ENSGALG00000001229 50 1 - - - - - - - 1.000 - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
79. THRB ENSGALG00000011294 7 1 - - - - - - - 1.000 - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
80. GDPD4 ENSGALG00000000690 824 1 - - - - - - - 1.000 - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
81. TMEM72 ENSGALG00000026808 5 1 - - - - - - - 1.000 - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
82. ROS1 ENSGALG00000014913 7 1 - - - - - - - 1.000 - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
83. OTX2 ENSGALG00000034889 8 1 - - - - - - - 1.000 - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
84. MECR ENSGALG00000032763 110 1 - - - - - - - 1.000 - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
85. OSBPL3 ENSGALG00000011007 23 1 - - - - - - - 1.000 - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
86. IQSEC3 ENSGALG00000012975 4 1 - - - - - - - 1.000 - - IQ motif and Sec7 domain 3, transcript variant X5
87. SNORD91 SNORD91 1 1 - - - - - - - - - 1.000
88. KIAA0319L ENSGALG00000002445 75 1 - - - - - - - 1.000 - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
89. MICALL2 ENSGALG00000004070 23 1 - - - - - - - 1.000 - - MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]
90. KLHL40 ENSGALG00000005292 61 1 - - - - - - - 1.000 - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
91. SLC35A5 11 1 - - 1.000 - - - - - - - solute carrier family 35 member A5, transcript variant X6
92. ADPRHL1 ENSGALG00000016826 133 1 - - - - - - - 1.000 - - ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
93. SPIDR SPIDR 19 1 - - - - - - - 1.000 - -
94. SPINK6 ENSGALG00000032567 3 1 - - - - - - - 1.000 - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
95. CRYBA2 ENSGALG00000011354 14 1 - - - - - - - 1.000 - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
96. TRIM3 ENSGALG00000034004 110 1 - - - - - - - 1.000 - - tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
97. C11orf49 ENSGALG00000008255 36 1 - - - - - - 1.000 - - - chromosome 11 open reading frame 49 [Source:HGNC Symbol;Acc:HGNC:28720]
98. IL8 ENSGALG00000026098 16 1 - - - - - - - 1.000 - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
99. ENSGALG00000026032 ENSGALG00000026032 1 1 - - 1.000 - - - - - - -
100. FADS1L1 ENSGALG00000020485 3 1 - - - - - - - 1.000 - - fatty acid desaturase 1-like 1

There are 416 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA