Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRAF6

Gene Name Gene ID Reads Annotation
TRAF6 ENSGALG00000007932 12 TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]











Genes with expression patterns similar to TRAF6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRAF6 ENSGALG00000007932 12 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
2. ANKRD31 46 2.497 - - - - - 0.767 - 1.000 - 0.730 ankyrin repeat domain 31, transcript variant X2
3. SPOCK3 ENSGALG00000009568 33 2 - - - - - - 1.000 1.000 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
4. gga-mir-218-1 ENSGALG00000018327 3 2 - - - - - - - 1.000 - 1.000 gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
5. SUSD5 ENSGALG00000042289 1 2 - - 1.000 - - - - 1.000 - - sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]
6. IL18R1 ENSGALG00000040621 12 2 - - 1.000 - - - - 1.000 - - interleukin 18 receptor 1 [Source:NCBI gene;Acc:418717]
7. COL4A3 ENSGALG00000038612 41 1.855 - - - - - - - 1.000 - 0.855 collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
8. HK3 ENSGALG00000027287 20 1.827 - - - - - - 0.827 1.000 - - hexokinase 3, transcript variant X3
9. COG3 ENSGALG00000016980 15 1.794 - - - - 0.794 - - 1.000 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
10. TOX3 ENSGALG00000034649 54 1.786 - - - - - 0.786 - 1.000 - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
11. PAPPA ENSGALG00000007079 6 1.786 - - - - - 0.786 - 1.000 - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
12. DDTNFR23 ENSGALG00000006407 4 1.786 - - - - - 0.786 - 1.000 - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
13. COTL1 ENSGALG00000017644 81 1.786 - - - - - 0.786 - 1.000 - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
14. FHDC1 ENSGALG00000041054 34 1.782 - - - - - 0.782 - 1.000 - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
15. ENSGALG00000028298 ENSGALG00000028298 34 1.777 - - - - - 0.777 - 1.000 - -
16. CD109 ENSGALG00000015910 11 1.554 - - - 0.840 - 0.714 - - - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
17. KIAA1958 ENSGALG00000023083 1 1 - - 1.000 - - - - - - - KIAA1958 [Source:HGNC Symbol;Acc:HGNC:23427]
18. ABCC2 ENSGALG00000007395 1 1 - - 1.000 - - - - - - - ATP binding cassette subfamily C member 2, transcript variant X2
19. SLC25A42 ENSGALG00000002621 6 1 - - - - - - - 1.000 - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
20. IPMK ENSGALG00000002710 40 1 - - - - - - 1.000 - - - inositol polyphosphate multikinase [Source:HGNC Symbol;Acc:HGNC:20739]
21. TLL2 ENSGALG00000005519 10 1 - - - - - - - 1.000 - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
22. CAMK1 ENSGALG00000029912 6 1 - - - - - - 1.000 - - - calcium/calmodulin dependent protein kinase I [Source:HGNC Symbol;Acc:HGNC:1459]
23. GTF2A1L ENSGALG00000026747 13 1 - - - - - - - 1.000 - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
24. ENSGALG00000028737 ENSGALG00000028737 24 1 - - - - - - - 1.000 - -
25. CUBN ENSGALG00000008704 21 1 - - - - - - - 1.000 - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
26. SNORA26 SNORA26 3 1 - - - - - - - 1.000 - -
27. CERKL ENSGALG00000008910 70 1 - - - - - - - 1.000 - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
28. KLHL40 ENSGALG00000005292 61 1 - - - - - - - 1.000 - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
29. SCN4B ENSGALG00000007409 22 1 - - - - - - - 1.000 - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
30. TJP3 ENSGALG00000000748 45 1 - - - - - - 1.000 - - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
31. WDR78 ENSGALG00000045792 6 1 - - - - - - - 1.000 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
32. ROS1 ENSGALG00000014913 7 1 - - - - - - - 1.000 - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
33. CNGA4 ENSGALG00000022704 4 1 - - - - - - 1.000 - - - cyclic nucleotide gated channel alpha 4 [Source:HGNC Symbol;Acc:HGNC:2152]
34. CREB3L1 ENSGALG00000008393 3 1 - - - - - - - 1.000 - - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
35. RADIL ENSGALG00000004504 0 1 - - - - - - - 1.000 - - Rap associating with DIL domain [Source:HGNC Symbol;Acc:HGNC:22226]
36. ENSGALG00000001138 ENSGALG00000001138 21 1 - - - - - - - 1.000 - -
37. TNIK ENSGALG00000009298 38 1 - - - - - - 1.000 - - - TRAF2 and NCK interacting kinase [Source:HGNC Symbol;Acc:HGNC:30765]
38. WDR90 ENSGALG00000028172 13 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
39. ARHGEF26 ENSGALG00000010352 3 1 - - 1.000 - - - - - - - Rho guanine nucleotide exchange factor 26 [Source:HGNC Symbol;Acc:HGNC:24490]
40. CLDN15 ENSGALG00000038964 21 1 - - - - - - - 1.000 - - claudin 15, transcript variant X4
41. SESN2_1 ENSGALG00000005648, ENSGALG00000037603 2 1 - - - - - - - 1.000 - - sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
42. DOK6 ENSGALG00000013753 2 1 - - - - - - - 1.000 - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
43. SREBP-1 SREBP-1 2 1 - - 1.000 - - - - - - -
44. XRRA1 ENSGALG00000017310 2 1 - - - - - - 1.000 - - - X-ray radiation resistance associated 1 [Source:HGNC Symbol;Acc:HGNC:18868]
45. LOC395381 ENSGALG00000006717 10 1 - - - - - - - 1.000 - - ovomucin, alpha subunit, transcript variant X4
46. COL15A1 ENSGALG00000034119 9 1 - - - - - - - 1.000 - - collagen type XV alpha 1 chain, transcript variant X6
47. SEC16B ENSGALG00000004424 4 1 - - - - - - - 1.000 - - SEC16 homolog B, endoplasmic reticulum export factor [Source:NCBI gene;Acc:424431]
48. CSRP3 ENSGALG00000004044 456 1 - - - - - - - 1.000 - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
49. TRIM3 ENSGALG00000034004 110 1 - - - - - - - 1.000 - - tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
50. SLC6A20 ENSGALG00000039333 1 1 - - - - - - - 1.000 - - solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]
51. NINJ2 ENSGALG00000012989 2 1 - - - - - - - - - 1.000 ninjurin 2 [Source:HGNC Symbol;Acc:HGNC:7825]
52. ETNPPL ENSGALG00000034741 39 1 - - 1.000 - - - - - - - ethanolamine-phosphate phospho-lyase [Source:HGNC Symbol;Acc:HGNC:14404]
53. MYO1D ENSGALG00000000674 14 1 - - - - - - - 1.000 - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
54. TPH1 ENSGALG00000006236 21 1 - - - - - - - 1.000 - - tryptophan hydroxylase 1 [Source:NCBI gene;Acc:395799]
55. CBLN1 ENSGALG00000042664 15 1 - - - - - - - 1.000 - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
56. FOXI1 ENSGALG00000002105 0 1 - - - - - - - 1.000 - - forkhead box I1 [Source:HGNC Symbol;Acc:HGNC:3815]
57. CLVS1 ENSGALG00000043172 56 1 - - - - - - - 1.000 - - clavesin 1
58. PEX5 ENSGALG00000014683 17 1 - - - - - - - 1.000 - - peroxisomal biogenesis factor 5 [Source:NCBI gene;Acc:418299]
59. ATF6 ENSGALG00000032278 71 1 - - - - - - 1.000 - - - activating transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:791]
60. SH3GL3 ENSGALG00000006045 12 1 - - - - - - - 1.000 - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
61. WDR27 ENSGALG00000037464 9 1 - - - - - - 1.000 - - - WD repeat domain 27
62. RAI1 ENSGALG00000004888 14 1 - - - - - - - 1.000 - - retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
63. MYLK2 ENSGALG00000006273 5 1 - - - - - - - 1.000 - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
64. ENSGALG00000029127 ENSGALG00000029127 2 1 - - - - - - - 1.000 - -
65. TRNAU1AP ENSGALG00000001310 7 1 - - - - - - - - - 1.000 tRNA selenocysteine 1 associated protein 1, transcript variant X4
66. NLGN4 NLGN4 283 1 - - - - - - - 1.000 - -
67. HPGD ENSGALG00000010769 5 1 - - - - - - - 1.000 - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
68. CRB1 ENSGALG00000002287 2 1 - - - - - - 1.000 - - - crumbs 1, cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:2343]
69. RAD54L ENSGALG00000010356 7 1 - - - - - - - 1.000 - - RAD54-like (S. cerevisiae) [Source:NCBI gene;Acc:424611]
70. BAFF BAFF 40 1 - - - - - - - 1.000 - -
71. BTG4 ENSGALG00000007618 2 1 - - - - - - - 1.000 - - BTG anti-proliferation factor 4 [Source:NCBI gene;Acc:419781]
72. RBL2 ENSGALG00000003663 10 1 - - - - - - - 1.000 - - RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
73. ENSGALG00000005482 ENSGALG00000005482 1 1 - - - - - - - 1.000 - -
74. CREB3 ENSGALG00000002523 23 1 - - - - - - - 1.000 - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
75. ENSGALG00000019602 ENSGALG00000019602 2 1 - - - - - - - 1.000 - -
76. DMGDH ENSGALG00000004491 15 1 - - - - - - - 1.000 - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
77. ENSGALG00000010218 ENSGALG00000010218 12 1 - - - - - - - 1.000 - -
78. TMEM72 ENSGALG00000026808 5 1 - - - - - - - 1.000 - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
79. APOD ENSGALG00000006995 2 1 - - - - - - - 1.000 - - apolipoprotein D [Source:NCBI gene;Acc:424893]
80. PHC2 62 1 - - - - - - - 1.000 - - polyhomeotic homolog 2
81. SPIDR SPIDR 19 1 - - - - - - - 1.000 - -
82. FAM124A ENSGALG00000017016 0 1 - - - - - - - 1.000 - - family with sequence similarity 124 member A [Source:HGNC Symbol;Acc:HGNC:26413]
83. EPSTI1 ENSGALG00000016964 6 1 - - - - - - - 1.000 - - epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
84. SNORD91 SNORD91 1 1 - - - - - - - - - 1.000
85. CPSF3 ENSGALG00000016424 342 1 - - - - - - 1.000 - - - cleavage and polyadenylation specific factor 3 [Source:HGNC Symbol;Acc:HGNC:2326]
86. CD99L2 ENSGALG00000009075 5 1 - - - - - - - 1.000 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
87. ENSGALG00000022967 ENSGALG00000022967 240 1 - - - - - - - 1.000 - -
88. USP19 ENSGALG00000006824 44 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
89. TGFBR2 ENSGALG00000011442 3 1 - - - - - - - 1.000 - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]
90. AOC1 13 1 - - - - - - - 1.000 - - amine oxidase, copper containing 1, transcript variant X2
91. KCNK16 ENSGALG00000020049 0 1 - - - - - - - 1.000 - - potassium two pore domain channel subfamily K member 16 [Source:HGNC Symbol;Acc:HGNC:14464]
92. H2AFX ENSGALG00000045705 7 1 - - - - - - 1.000 - - - H2A histone family member X
93. ENSGALG00000015220 ENSGALG00000015220 1 1 - - - - - - 1.000 - - -
94. ENSGALG00000017391 ENSGALG00000017391 12 1 - - - - - - - 1.000 - -
95. SLC6A4 ENSGALG00000004246 5 1 - - - - - - - 1.000 - - solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]
96. TIMP4 ENSGALG00000004969 21 1 - - - - - - - 1.000 - - TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
97. TERF2IP ENSGALG00000000903 41 1 - - - - - - - 1.000 - - TERF2 interacting protein [Source:NCBI gene;Acc:395122]
98. MOCS1 ENSGALG00000010051 70 1 - - - - - - - 1.000 - - molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
99. ATMIN ENSGALG00000040475 16 1 - - - - - - - - - 1.000 ATM interactor [Source:HGNC Symbol;Acc:HGNC:29034]
100. BLB1 ENSGALG00000000141 13 1 - - - - - - - 1.000 - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]

There are 416 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA