Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRAF6

Gene Name Gene ID Reads Annotation
TRAF6 ENSGALG00000007932 12 TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]











Genes with expression patterns similar to TRAF6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRAF6 ENSGALG00000007932 12 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
2. ANKRD31 46 2.497 - - - - - 0.767 - 1.000 - 0.730 ankyrin repeat domain 31, transcript variant X2
3. SPOCK3 ENSGALG00000009568 33 2 - - - - - - 1.000 1.000 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
4. gga-mir-218-1 ENSGALG00000018327 3 2 - - - - - - - 1.000 - 1.000 gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
5. IL18R1 ENSGALG00000040621 12 2 - - 1.000 - - - - 1.000 - - interleukin 18 receptor 1 [Source:NCBI gene;Acc:418717]
6. SUSD5 ENSGALG00000042289 1 2 - - 1.000 - - - - 1.000 - - sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]
7. COL4A3 ENSGALG00000038612 41 1.855 - - - - - - - 1.000 - 0.855 collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
8. HK3 ENSGALG00000027287 20 1.827 - - - - - - 0.827 1.000 - - hexokinase 3, transcript variant X3
9. COG3 ENSGALG00000016980 15 1.794 - - - - 0.794 - - 1.000 - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
10. TOX3 ENSGALG00000034649 54 1.786 - - - - - 0.786 - 1.000 - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
11. PAPPA ENSGALG00000007079 6 1.786 - - - - - 0.786 - 1.000 - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
12. COTL1 ENSGALG00000017644 81 1.786 - - - - - 0.786 - 1.000 - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
13. DDTNFR23 ENSGALG00000006407 4 1.786 - - - - - 0.786 - 1.000 - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
14. FHDC1 ENSGALG00000041054 34 1.782 - - - - - 0.782 - 1.000 - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
15. ENSGALG00000028298 ENSGALG00000028298 34 1.777 - - - - - 0.777 - 1.000 - -
16. CD109 ENSGALG00000015910 11 1.554 - - - 0.840 - 0.714 - - - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
17. NPHS2 ENSGALG00000004163 850 1 - - - - - - 1.000 - - - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
18. LAMC1 ENSGALG00000004620 11 1 - - - - - - - 1.000 - - laminin subunit gamma 1 [Source:HGNC Symbol;Acc:HGNC:6492]
19. CTRB2 ENSGALG00000000038 6 1 - - - - - - - 1.000 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
20. RASSF6 ENSGALG00000011664 7 1 - - - - - - - 1.000 - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
21. RAD54L ENSGALG00000010356 7 1 - - - - - - - 1.000 - - RAD54-like (S. cerevisiae) [Source:NCBI gene;Acc:424611]
22. TCF20 ENSGALG00000011878 69 1 - - - - - - - 1.000 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
23. RBMS3 ENSGALG00000011439 25 1 - - - - - - - 1.000 - - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
24. FOXI1 ENSGALG00000002105 0 1 - - - - - - - 1.000 - - forkhead box I1 [Source:HGNC Symbol;Acc:HGNC:3815]
25. TMEM204 ENSGALG00000029047 8 1 - - - - - - - 1.000 - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
26. ENSGALG00000026925 ENSGALG00000026925 119 1 - - - - - - - 1.000 - -
27. CPSF3 ENSGALG00000016424 342 1 - - - - - - 1.000 - - - cleavage and polyadenylation specific factor 3 [Source:HGNC Symbol;Acc:HGNC:2326]
28. PDCD4 ENSGALG00000008700 574 1 - - - - - - - 1.000 - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
29. MGAT3 ENSGALG00000036743 5 1 - - - - - - - 1.000 - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
30. PHC2 62 1 - - - - - - - 1.000 - - polyhomeotic homolog 2
31. NPBWR1 ENSGALG00000015261 6 1 - - - - - - - 1.000 - - Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
32. CYP7B1 ENSGALG00000029435 3 1 - - - - - - - 1.000 - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
33. ENSGALG00000019602 ENSGALG00000019602 2 1 - - - - - - - 1.000 - -
34. ENSGALG00000015220 ENSGALG00000015220 1 1 - - - - - - 1.000 - - -
35. TSGA10 ENSGALG00000016757 4 1 - - - - - - - 1.000 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
36. WDR90 ENSGALG00000028172 13 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
37. SNORA26 SNORA26 3 1 - - - - - - - 1.000 - -
38. APOD ENSGALG00000006995 2 1 - - - - - - - 1.000 - - apolipoprotein D [Source:NCBI gene;Acc:424893]
39. C1orf116 ENSGALG00000001091 34 1 - - - - - - 1.000 - - - chromosome 1 open reading frame 116 [Source:HGNC Symbol;Acc:HGNC:28667]
40. TRAF1 ENSGALG00000001583 3 1 - - - - - - - 1.000 - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
41. CBX2 ENSGALG00000023338 10 1 - - - - - - - 1.000 - - chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
42. KIAA1958 ENSGALG00000023083 1 1 - - 1.000 - - - - - - - KIAA1958 [Source:HGNC Symbol;Acc:HGNC:23427]
43. LOC395381 ENSGALG00000006717 10 1 - - - - - - - 1.000 - - ovomucin, alpha subunit, transcript variant X4
44. ENSGALG00000011926 ENSGALG00000011926 6 1 - - 1.000 - - - - - - -
45. SKI ENSGALG00000001229 50 1 - - - - - - - 1.000 - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
46. NLGN4 NLGN4 283 1 - - - - - - - 1.000 - -
47. SPINK6 ENSGALG00000032567 3 1 - - - - - - - 1.000 - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
48. MOCS1 ENSGALG00000010051 70 1 - - - - - - - 1.000 - - molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
49. CACNG4 ENSGALG00000026091 6 1 - - - - - - 1.000 - - - calcium voltage-gated channel auxiliary subunit gamma 4 [Source:NCBI gene;Acc:373924]
50. CD99L2 ENSGALG00000009075 5 1 - - - - - - - 1.000 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
51. SPIDR SPIDR 19 1 - - - - - - - 1.000 - -
52. LRP3 ENSGALG00000004853 13 1 - - - - - - - 1.000 - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
53. TJP3 ENSGALG00000000748 45 1 - - - - - - 1.000 - - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
54. VIL1 ENSGALG00000037286 5 1 - - - - - - - - - 1.000 villin 1 [Source:NCBI gene;Acc:396423]
55. ENSGALG00000005482 ENSGALG00000005482 1 1 - - - - - - - 1.000 - -
56. SNORA44 SNORA44 29 1 - - - - - - - 1.000 - -
57. MEIOB ENSGALG00000005411 6 1 - - - - - - - 1.000 - - meiosis specific with OB domains [Source:HGNC Symbol;Acc:HGNC:28569]
58. ENSGALG00000025856 ENSGALG00000025856 3 1 - - 1.000 - - - - - - -
59. ENSGALG00000001138 ENSGALG00000001138 21 1 - - - - - - - 1.000 - -
60. TNIK ENSGALG00000009298 38 1 - - - - - - 1.000 - - - TRAF2 and NCK interacting kinase [Source:HGNC Symbol;Acc:HGNC:30765]
61. TMSB10 TMSB10 518 1 - - - - - - - 1.000 - -
62. RBM43 ENSGALG00000012479 5 1 - - - - - - - 1.000 - - RNA binding motif protein 43 [Source:HGNC Symbol;Acc:HGNC:24790]
63. DSCAM ENSGALG00000016138 16 1 - - - - - - - 1.000 - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
64. C11orf87 ENSGALG00000017155 2 1 - - 1.000 - - - - - - - chromosome 11 open reading frame 87 [Source:HGNC Symbol;Acc:HGNC:33788]
65. LOC100857820 ENSGALG00000001824 16 1 - - - - - - - 1.000 - - uncharacterized LOC100857820
66. KIAA1755 3 1 - - - - - - - 1.000 - - KIAA1755 ortholog, transcript variant X2
67. IL8 ENSGALG00000026098 16 1 - - - - - - - 1.000 - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
68. TNFRSF13B ENSGALG00000024122 0 1 - - - - - - - 1.000 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
69. CYBA ENSGALG00000029367 125 1 - - - - - - - 1.000 - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
70. MATN4 ENSGALG00000004028 15 1 - - 1.000 - - - - - - - matrilin 4 [Source:HGNC Symbol;Acc:HGNC:6910]
71. ABCC2 ENSGALG00000007395 1 1 - - 1.000 - - - - - - - ATP binding cassette subfamily C member 2, transcript variant X2
72. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - - 1.000 - -
73. BCORL1 ENSGALG00000003976 9 1 - - - - - - - 1.000 - - BCL6 corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:25657]
74. TMEM72 ENSGALG00000026808 5 1 - - - - - - - 1.000 - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
75. SLC39A12 ENSGALG00000008602 6 1 - - - - - - - 1.000 - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
76. OCM2 ENSGALG00000003465 74 1 - - - - - - - 1.000 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
77. COL19A1 ENSGALG00000043584 38 1 - - - - - - 1.000 - - - collagen type XIX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2196]
78. KLHL40 ENSGALG00000005292 61 1 - - - - - - - 1.000 - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
79. HLCS ENSGALG00000016047 30 1 - - - - - - - 1.000 - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
80. PPP1R36 ENSGALG00000040026 24 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
81. C1H7ORF60 C1H7ORF60 3 1 - - - - - - - 1.000 - -
82. SLC38A10 ENSGALG00000006880 34 1 - - - - - - - 1.000 - - solute carrier family 38 member 10 [Source:HGNC Symbol;Acc:HGNC:28237]
83. NME8 ENSGALG00000029677 2 1 - - - - - - - 1.000 - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
84. ENSGALG00000022967 ENSGALG00000022967 240 1 - - - - - - - 1.000 - -
85. STAR ENSGALG00000003242 4 1 - - - - - - - 1.000 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
86. LICOS LICOS 13 1 - - - - - - - 1.000 - -
87. ENSGALG00000016393 ENSGALG00000016393 3 1 - - - - - - - 1.000 - -
88. ENSGALG00000007135 ENSGALG00000007135 3 1 - - - - - - 1.000 - - -
89. SLC6A20 ENSGALG00000039333 1 1 - - - - - - - 1.000 - - solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]
90. DMGDH ENSGALG00000004491 15 1 - - - - - - - 1.000 - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
91. TRIM3 ENSGALG00000034004 110 1 - - - - - - - 1.000 - - tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
92. ENSGALG00000025781 ENSGALG00000025781 1 1 - - - - - - - 1.000 - -
93. GDPD4 ENSGALG00000000690 824 1 - - - - - - - 1.000 - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
94. ENSGALG00000027249 ENSGALG00000027249 1 1 - - 1.000 - - - - - - -
95. SREBP-1 SREBP-1 2 1 - - 1.000 - - - - - - -
96. SCG5 ENSGALG00000009725 10 1 - - - - - - - 1.000 - - secretogranin V [Source:NCBI gene;Acc:769742]
97. ZC2HC1B 15 1 - - - - - - - - - 1.000 zinc finger C2HC-type containing 1B
98. CDC42EP3 ENSGALG00000010551 15 1 - - - - - - 1.000 - - - CDC42 effector protein 3 [Source:HGNC Symbol;Acc:HGNC:16943]
99. VIT ENSGALG00000010583 16 1 - - - - - - - 1.000 - - vitrin [Source:NCBI gene;Acc:421471]
100. ENSGALG00000028340 ENSGALG00000028340 31 1 - - - - - - - 1.000 - -

There are 416 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA