Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRAF3IP1

Gene Name Gene ID Reads Annotation
TRAF3IP1 ENSGALG00000004236 7094 TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]











Genes with expression patterns similar to TRAF3IP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRAF3IP1 ENSGALG00000004236 7094 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
2. VTA1 ENSGALG00000013810 4998 2.37 - - 0.773 - - - 0.864 0.733 - - vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]
3. BBX ENSGALG00000015353 1281 1.774 - - 0.925 - - - 0.849 - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
4. NLK ENSGALG00000005699 9066 1.769 - - 0.868 - - - 0.901 - - - nemo like kinase [Source:HGNC Symbol;Acc:HGNC:29858]
5. AASDHPPT ENSGALG00000027981 1017 1.757 - - 0.903 - - - 0.854 - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
6. DPY30 ENSGALG00000010621 6818 1.756 - - - - - - 0.905 0.851 - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
7. FBXO45 ENSGALG00000037281 3936 1.739 - - 0.869 - - - 0.870 - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]
8. ACP1 ENSGALG00000016363 10636 1.734 - - - - - - 0.866 0.868 - - acid phosphatase 1 [Source:NCBI gene;Acc:421909]
9. EMC3 ENSGALG00000003738 10363 1.727 - - - - - - 0.889 0.838 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
10. PEMT ENSGALG00000004875 4094 1.712 - - 0.866 - - - 0.846 - - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
11. MRPS33 ENSGALG00000028879 17966 1.706 - - 0.870 - - - 0.836 - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
12. UTP18 ENSGALG00000002985 7129 1.7 - - - - - - 0.930 0.770 - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
13. WBP4 ENSGALG00000016949 5858 1.695 - - 0.806 - - - 0.889 - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
14. ZNF335 ENSGALG00000041370 4740 1.694 - - 0.787 - - - 0.907 - - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
15. SFXN4 ENSGALG00000009350 3899 1.693 - - 0.769 - - - 0.924 - - - sideroflexin 4 [Source:HGNC Symbol;Acc:HGNC:16088]
16. BTBD9 ENSGALG00000010131 1870 1.679 - - 0.823 - - - 0.856 - - - BTB domain containing 9 [Source:NCBI gene;Acc:421429]
17. DAK DAK 13208 1.676 - - 0.877 - - - 0.799 - - -
18. NDUFV1 ENSGALG00000042809 6222 1.676 - - 0.824 - - - 0.852 - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
19. CHDZ CHDZ 10381 1.675 - - - - - - 0.857 0.818 - -
20. CWF19L2 ENSGALG00000017171 4590 1.665 - - 0.770 - - - 0.895 - - - CWF19 like cell cycle control factor 2 [Source:HGNC Symbol;Acc:HGNC:26508]
21. MNAT1 ENSGALG00000011910 6809 1.66 - - - - - - 0.901 0.759 - - MNAT1, CDK activating kinase assembly factor [Source:HGNC Symbol;Acc:HGNC:7181]
22. TPP2 ENSGALG00000016865 7509 1.66 - - 0.776 - - - 0.884 - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
23. TBP ENSGALG00000011171 5759 1.655 - - - - - - 0.820 0.835 - - TATA-box binding protein [Source:NCBI gene;Acc:395995]
24. RSRC1 ENSGALG00000009669 5829 1.648 - - 0.862 - - - - 0.786 - - arginine and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24152]
25. C1H21ORF91 ENSGALG00000028290 5550 1.645 - - - - - - 0.902 0.743 - - chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
26. LCMT1 ENSGALG00000005973 1300 1.642 - - 0.911 - - - - 0.731 - - leucine carboxyl methyltransferase 1 [Source:NCBI gene;Acc:416565]
27. TMEM38A ENSGALG00000003778 3867 1.641 - - - - - - 0.885 0.756 - - transmembrane protein 38A [Source:NCBI gene;Acc:771253]
28. HINT3 ENSGALG00000044342 5674 1.639 - - 0.878 - - - - 0.761 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
29. SNN ENSGALG00000028876 1687 1.63 - - 0.925 - - - - 0.705 - - stannin [Source:NCBI gene;Acc:416429]
30. LBR 6686 1.624 - - 0.912 - - - - 0.712 - - lamin B receptor, transcript variant X4
31. XPC ENSGALG00000006357 2484 1.621 - - - - - - 0.915 0.706 - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
32. UBE2K ENSGALG00000014290 2138 1.617 - - - - - - 0.861 0.756 - - ubiquitin conjugating enzyme E2 K [Source:NCBI gene;Acc:428787]
33. CDK5RAP2 ENSGALG00000041102 4042 1.615 - - - - - - 0.879 0.736 - - CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18672]
34. RBM25 ENSGALG00000009332 10842 1.614 - - 0.812 - - - 0.802 - - - RNA binding motif protein 25 [Source:NCBI gene;Acc:423250]
35. MKRN1 ENSGALG00000012852 6907 1.613 - - - - - - 0.901 0.712 - - makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
36. BAG5 ENSGALG00000031062 4498 1.607 - - 0.876 - - - - 0.731 - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
37. NELL2 ENSGALG00000009601 4243 1.598 - - - - - - 0.881 0.717 - - neural EGFL like 2 [Source:NCBI gene;Acc:417799]
38. METTL5 ENSGALG00000009676 3252 1.588 - - 0.860 - - - - 0.728 - - methyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:25006]
39. SPCS1 ENSGALG00000001655 7718 1.586 - - 0.811 - - - - 0.775 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
40. PISD ENSGALG00000006872 3539 1.576 - - - - - - 0.871 0.705 - - phosphatidylserine decarboxylase [Source:HGNC Symbol;Acc:HGNC:8999]
41. VPS4B ENSGALG00000012879 6720 1.574 - - - - - - 0.837 0.737 - - vacuolar protein sorting 4 homolog B [Source:NCBI gene;Acc:420901]
42. URM1 ENSGALG00000004971 17880 1.568 - - 0.853 - - - - 0.715 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
43. FAM168B ENSGALG00000002172 12162 1.565 - - 0.795 - - - 0.770 - - - family with sequence similarity 168 member B [Source:HGNC Symbol;Acc:HGNC:27016]
44. FUT8 ENSGALG00000036443 5589 1.559 - - - - - - 0.856 0.703 - - fucosyltransferase 8 [Source:NCBI gene;Acc:423178]
45. CHCHD4 ENSGALG00000006328 5860 1.556 - - - - - - 0.841 0.715 - - coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:NCBI gene;Acc:416037]
46. SLC12A4 ENSGALG00000034179 5674 1.549 - - 0.779 - - - - 0.770 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
47. MRPS22 ENSGALG00000005367 8307 1.534 - - 0.714 - - - - 0.820 - - mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:HGNC:14508]
48. TMEM175 ENSGALG00000015368 3342 1.528 - - 0.809 - - - - 0.719 - - transmembrane protein 175 [Source:NCBI gene;Acc:427293]
49. BZW2 ENSGALG00000010809 29213 1.527 - - 0.715 - - - - 0.812 - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
50. POMP ENSGALG00000017090 5504 1.516 - - 0.779 - - - - 0.737 - - proteasome maturation protein [Source:HGNC Symbol;Acc:HGNC:20330]
51. PHF3 ENSGALG00000016267 4148 1.508 - - 0.780 - - - - 0.728 - - PHD finger protein 3 [Source:HGNC Symbol;Acc:HGNC:8921]
52. ROCK1 ENSGALG00000014922 4020 1.504 - - 0.711 - - - - 0.793 - - Rho-associated, coiled-coil containing protein kinase 1 [Source:NCBI gene;Acc:373970]
53. SPDL1 ENSGALG00000001942 4403 1.498 - - 0.795 - - - - 0.703 - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
54. NUP37 ENSGALG00000012759 9985 1.497 - - 0.726 - - - - 0.771 - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
55. ACTR8 ENSGALG00000005385 3647 1.466 - - 0.760 - - - - 0.706 - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
56. PTRH2 ENSGALG00000005150 4756 1.464 - - 0.763 - - - - 0.701 - - peptidyl-tRNA hydrolase 2 [Source:NCBI gene;Acc:417634]
57. PRKACB ENSGALG00000028530 12506 1.454 - - 0.709 - - - - 0.745 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
58. ANLN 10479 1.439 - - 0.727 - - - - 0.712 - - anillin actin binding protein, transcript variant X2
59. SEC31A ENSGALG00000040484 20190 1.427 - - 0.701 - - - 0.726 - - - SEC31 homolog A, COPII coat complex component [Source:NCBI gene;Acc:422597]
60. HCCS ENSGALG00000005571 4939 1.421 - - 0.707 - - - - 0.714 - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
61. DNM1L ENSGALG00000012929 6174 1.418 - - 0.707 - - - - 0.711 - - dynamin 1 like [Source:NCBI gene;Acc:418132]
62. CHMP4B ENSGALG00000002095 17422 1.407 - - 0.702 - - - - 0.705 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
63. FAM172A ENSGALG00000014661 10565 0.942 - - - - - - 0.942 - - - family with sequence similarity 172 member A [Source:NCBI gene;Acc:427109]
64. PCYT1B 190 0.936 - - 0.936 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
65. TTPAL ENSGALG00000004244 2734 0.929 - - 0.929 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
66. TFAP2C ENSGALG00000007690 768 0.929 - - 0.929 - - - - - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
67. NDC1 ENSGALG00000031606 3094 0.928 - - 0.928 - - - - - - - NDC1 transmembrane nucleoporin [Source:HGNC Symbol;Acc:HGNC:25525]
68. GCC2 ENSGALG00000016806 1085 0.928 - - 0.928 - - - - - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
69. AKTIP ENSGALG00000033378 1991 0.927 - - 0.927 - - - - - - - AKT interacting protein [Source:NCBI gene;Acc:415720]
70. XPO6 ENSGALG00000035360 7042 0.927 - - - - - - 0.927 - - - exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
71. BTG1L ENSGALG00000004676 2293 0.926 - - 0.926 - - - - - - - protein BTG1-like
72. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.926 - - 0.926 - - - - - - -
73. DCP1B 1306 0.925 - - 0.925 - - - - - - - decapping mRNA 1B
74. SEPHS1 ENSGALG00000014575 10701 0.925 - - 0.925 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
75. RALGDS ENSGALG00000003412 4478 0.924 - - 0.924 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
76. FNDC3AL ENSGALG00000004169 4980 0.924 - - - - - - 0.924 - - - fibronectin type III domain containing 3A-like, transcript variant X3
77. TUBGCP3 ENSGALG00000016836 332 0.923 - - 0.923 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
78. FUBP3 ENSGALG00000003941 12667 0.922 - - - - - - 0.922 - - - far upstream element binding protein 3 [Source:NCBI gene;Acc:417184]
79. PARP16 ENSGALG00000007365 9467 0.92 - - - - - - 0.920 - - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
80. IFITM3 ENSGALG00000026970 4738 0.92 - - - - - - 0.920 - - - Gallus gallus interferon-induced transmembrane protein 3 (IFITM3), mRNA. [Source:RefSeq mRNA;Acc:NM_001350061]
81. DBN1 ENSGALG00000033405 216 0.92 - - 0.920 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
82. TCTN2 ENSGALG00000023683 3596 0.919 - - 0.919 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
83. PCDH17 ENSGALG00000016941 1006 0.919 - - 0.919 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
84. ZNF639 ENSGALG00000005944 6387 0.919 - - 0.919 - - - - - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
85. TRIM13 ENSGALG00000017011 92 0.918 - - 0.918 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
86. SMARCAD1 ENSGALG00000037339 149 0.918 - - 0.918 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
87. SLC3A1 ENSGALG00000009973 608 0.918 - - 0.918 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
88. GTF2H2 ENSGALG00000002399 2361 0.917 - - 0.917 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
89. MED15 ENSGALG00000006430 814 0.917 - - 0.917 - - - - - - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]
90. L3MBTL3 ENSGALG00000034030 113 0.917 - - 0.917 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
91. U4 U4 69 0.917 - - 0.917 - - - - - - -
92. FBXL5 ENSGALG00000014510 245 0.917 - - 0.917 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
93. ZDHHC7 ENSGALG00000042522 1774 0.916 - - 0.916 - - - - - - - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
94. ABCC3 ENSGALG00000007522 340 0.916 - - 0.916 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
95. ACOT7 ENSGALG00000000652 7976 0.916 - - - - - - 0.916 - - - acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
96. CWC22 ENSGALG00000009001 5984 0.916 - - - - - - 0.916 - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
97. AKAP17A ENSGALG00000016686 2469 0.916 - - - - - - 0.916 - - - A-kinase anchoring protein 17A [Source:NCBI gene;Acc:418664]
98. CAMSAP1 ENSGALG00000001692 2617 0.916 - - 0.916 - - - - - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
99. OSGIN2 ENSGALG00000042840 83 0.916 - - 0.916 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
100. FAM162A ENSGALG00000007378 8290 0.916 - - - - - - 0.916 - - - family with sequence similarity 162 member A [Source:HGNC Symbol;Acc:HGNC:17865]

There are 833 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA