Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRAF3

Gene Name Gene ID Reads Annotation
TRAF3 ENSGALG00000011389 7 TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]











Genes with expression patterns similar to TRAF3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRAF3 ENSGALG00000011389 7 4 - - 1.000 1.000 - 1.000 - - - 1.000 TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]
2. CXCR7 CXCR7 203 1 - - - - - - - - - 1.000
3. TRPA1 ENSGALG00000034751 148 1 - - - - - 1.000 - - - - Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
4. CD1A1 CD1A1 12 0.942 - - - - - - - - - 0.942
5. GIT1 ENSGALG00000023703 174 0.942 - - - - - - - - - 0.942 G protein-coupled receptor kinase interacting ArfGAP 1 [Source:NCBI gene;Acc:417584]
6. ATXN1L ENSGALG00000028253 17 0.924 - - - - - 0.924 - - - - ataxin 1 like [Source:HGNC Symbol;Acc:HGNC:33279]
7. SHROOM4 ENSGALG00000033953 3 0.923 - - - - - 0.923 - - - - shroom family member 4 [Source:HGNC Symbol;Acc:HGNC:29215]
8. ENSGALG00000016572 ENSGALG00000016572 79 0.923 - - - - - 0.923 - - - -
9. MTM1 ENSGALG00000009096 22 0.923 - - - - - 0.923 - - - - myotubularin 1 [Source:HGNC Symbol;Acc:HGNC:7448]
10. TBXAS1 ENSGALG00000012791 2 0.923 - - - - - 0.923 - - - - thromboxane A synthase 1 [Source:HGNC Symbol;Acc:HGNC:11609]
11. BLK ENSGALG00000016661 68 0.923 - - - - - 0.923 - - - - BLK proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:1057]
12. MREG ENSGALG00000003758 3 0.923 - - - - - 0.923 - - - - melanoregulin [Source:HGNC Symbol;Acc:HGNC:25478]
13. AMMECR1 ENSGALG00000008074 5 0.923 - - - - - 0.923 - - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 [Source:HGNC Symbol;Acc:HGNC:467]
14. KCNV1 ENSGALG00000031449 64 0.923 - - - - - 0.923 - - - - potassium voltage-gated channel modifier subfamily V member 1
15. ENSGALG00000027385 ENSGALG00000027385 1 0.923 - - - - - 0.923 - - - -
16. GNIH GNIH 8 0.923 - - - - - 0.923 - - - -
17. SAMD10 ENSGALG00000006007 15 0.923 - - - - - 0.923 - - - - sterile alpha motif domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16129]
18. WISP2 ENSGALG00000004154 4 0.923 - - - - - 0.923 - - - - WNT1 inducible signaling pathway protein 2 [Source:HGNC Symbol;Acc:HGNC:12770]
19. MYOZ1 ENSGALG00000005226 1 0.923 - - - - - 0.923 - - - - myozenin 1 [Source:HGNC Symbol;Acc:HGNC:13752]
20. DMC1 ENSGALG00000012236 1 0.923 - - - - - 0.923 - - - - DNA meiotic recombinase 1 [Source:HGNC Symbol;Acc:HGNC:2927]
21. TLR3 ENSGALG00000013468 35 0.923 - - - - - 0.923 - - - - toll like receptor 3 [Source:NCBI gene;Acc:422720]
22. GPX2 ENSGALG00000042031 4 0.923 - - - - - 0.923 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100857454]
23. ADCYAP1 ENSGALG00000014858 9 0.923 - - - - - 0.923 - - - - adenylate cyclase activating polypeptide 1 [Source:NCBI gene;Acc:408251]
24. UCP3 ENSGALG00000017316 30 0.923 - - - - - 0.923 - - - - uncoupling protein 3 [Source:NCBI gene;Acc:373896]
25. DCHS1 ENSGALG00000017334 12 0.922 - - - - - 0.922 - - - - dachsous cadherin-related 1, transcript variant X1
26. UIMC1 ENSGALG00000001158 22 0.917 - - - - - 0.917 - - - - ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
27. SOBP ENSGALG00000043047 147 0.907 - - - - - 0.907 - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
28. BRINP3 ENSGALG00000033407 40 0.906 - - - - - 0.906 - - - - BMP/retinoic acid inducible neural specific 3 [Source:HGNC Symbol;Acc:HGNC:22393]
29. NFAT5 ENSGALG00000039300 29 0.902 - - - - - 0.902 - - - - nuclear factor of activated T-cells 5 [Source:NCBI gene;Acc:415866]
30. ERC2 ENSGALG00000005419 24 0.897 - - - - - 0.897 - - - - ELKS/RAB6-interacting/CAST family member 2 [Source:HGNC Symbol;Acc:HGNC:31922]
31. IL2RG ENSGALG00000005638 21 0.894 - - 0.894 - - - - - - - interleukin 2 receptor subunit gamma [Source:NCBI gene;Acc:395199]
32. C12ORF32 C12ORF32 768 0.865 - - - - - 0.865 - - - -
33. NUMBL ENSGALG00000016508 12 0.863 - - - - - 0.863 - - - - numb homolog (Drosophila)-like, transcript variant X2
34. SIAH3 ENSGALG00000026849 384 0.862 - - - - - 0.862 - - - - siah E3 ubiquitin protein ligase family member 3 [Source:HGNC Symbol;Acc:HGNC:30553]
35. CNGA4 ENSGALG00000022704 4 0.855 - - - - - 0.855 - - - - cyclic nucleotide gated channel alpha 4 [Source:HGNC Symbol;Acc:HGNC:2152]
36. MAPKAPK3 ENSGALG00000002283 30 0.855 - - - - - 0.855 - - - - Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321558]
37. TUBE1 ENSGALG00000015017 39 0.854 - - 0.854 - - - - - - - tubulin epsilon 1, transcript variant X1
38. GPRC5B ENSGALG00000002028 28 0.85 - - 0.850 - - - - - - - G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
39. C14orf105 C14orf105 135 0.838 - - - - - - - - - 0.838
40. EFHC2 ENSGALG00000016221 8 0.83 - - - - - 0.830 - - - - EF-hand domain containing 2 [Source:NCBI gene;Acc:418559]
41. ARSD ENSGALG00000016648 33 0.828 - - 0.828 - - - - - - - arylsulfatase D, transcript variant X1
42. TSPAN33 ENSGALG00000013528 832 0.828 - - - - - 0.828 - - - - tetraspanin 33, transcript variant X2
43. SCUBE3 ENSGALG00000002675 12 0.826 - - 0.826 - - - - - - - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
44. SNORD47 SNORD47 61 0.826 - - 0.826 - - - - - - -
45. ENSGALG00000007032 ENSGALG00000007032 1 0.826 - - 0.826 - - - - - - -
46. CDC42EP3 ENSGALG00000010551 15 0.826 - - 0.826 - - - - - - - CDC42 effector protein 3 [Source:HGNC Symbol;Acc:HGNC:16943]
47. RCAN2 ENSGALG00000016709 8 0.826 - - 0.826 - - - - - - - regulator of calcineurin 2 [Source:HGNC Symbol;Acc:HGNC:3041]
48. CHIA ENSGALG00000023760 1 0.826 - - 0.826 - - - - - - - chitinase, acidic [Source:NCBI gene;Acc:395072]
49. RUFY4 2 0.826 - - 0.826 - - - - - - - RUN and FYVE domain containing 4, transcript variant X5
50. NCF2 ENSGALG00000004700 9 0.826 - - 0.826 - - - - - - - neutrophil cytosolic factor 2 [Source:HGNC Symbol;Acc:HGNC:7661]
51. TDH ENSGALG00000016651 3 0.826 - - 0.826 - - - - - - - L-threonine dehydrogenase (pseudogene)
52. ENSGALG00000012435 ENSGALG00000012435 3 0.826 - - 0.826 - - - - - - -
53. ANO10 ENSGALG00000042371 2 0.826 - - 0.826 - - - - - - - anoctamin 10 [Source:HGNC Symbol;Acc:HGNC:25519]
54. GFI1 ENSGALG00000043650 2 0.826 - - 0.826 - - - - - - - growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]
55. CTDSP1 ENSGALG00000027768 2 0.826 - - 0.826 - - - - - - - CTD small phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:21614]
56. HBEGF ENSGALG00000000949 15 0.826 - - 0.826 - - - - - - - heparin binding EGF like growth factor [Source:NCBI gene;Acc:395654]
57. SHOX2 ENSGALG00000039728 2 0.826 - - 0.826 - - - - - - - short stature homeobox 2 [Source:HGNC Symbol;Acc:HGNC:10854]
58. CCDC148 ENSGALG00000012555 22 0.815 - - - - - 0.815 - - - - coiled-coil domain containing 148 [Source:HGNC Symbol;Acc:HGNC:25191]
59. ETNK1 ENSGALG00000013205 18 0.815 - - 0.815 - - - - - - - ethanolamine kinase 1 [Source:HGNC Symbol;Acc:HGNC:24649]
60. ENSGALG00000015905 ENSGALG00000015905 5 0.811 - - - - - 0.811 - - - -
61. PCTPL ENSGALG00000028681 1 0.806 - - - - - 0.806 - - - - PCTP-like protein-like
62. ABHD2 ENSGALG00000006689 29 0.806 - - 0.806 - - - - - - - abhydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18717]
63. RELN ENSGALG00000008193 43 0.803 - - - - - 0.803 - - - - reelin [Source:NCBI gene;Acc:427850]
64. ADGB ENSGALG00000012317 28 0.8 - - 0.800 - - - - - - - androglobin [Source:HGNC Symbol;Acc:HGNC:21212]
65. ENSGALG00000023879 ENSGALG00000023879 9 0.799 - - - - - 0.799 - - - -
66. YES1 ENSGALG00000014860 31 0.799 - - - - - 0.799 - - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:NCBI gene;Acc:396238]
67. SLC5A1 ENSGALG00000006728 36 0.796 - - - - - 0.796 - - - - solute carrier family 5 member 1 [Source:NCBI gene;Acc:395496]
68. C1S ENSGALG00000014603 80 0.793 - - - - - 0.793 - - - - complement C1s [Source:NCBI gene;Acc:418294]
69. BAI2 BAI2 11 0.783 - - 0.783 - - - - - - -
70. CUTA ENSGALG00000001620 76 0.782 - - - - - 0.782 - - - - cutA divalent cation tolerance homolog
71. BF1 ENSGALG00000033932 18 0.782 - - - - - 0.782 - - - - MHC BF1 class I [Source:NCBI gene;Acc:693260]
72. KIAA1211 ENSGALG00000013771 135 0.782 - - - - - 0.782 - - - - KIAA1211 [Source:HGNC Symbol;Acc:HGNC:29219]
73. C1orf109 ENSGALG00000045165 467 0.78 - - - - - 0.780 - - - - chromosome 1 open reading frame 109 [Source:HGNC Symbol;Acc:HGNC:26039]
74. NEK7 ENSGALG00000002216 4532 0.78 - - - - - 0.780 - - - - NIMA related kinase 7 [Source:NCBI gene;Acc:424350]
75. CLCNKB ENSGALG00000003713 27 0.779 - - 0.779 - - - - - - - chloride voltage-gated channel Kb, transcript variant X3
76. ODZ1 ODZ1 124 0.778 - - - - - 0.778 - - - -
77. GLB1L ENSGALG00000011328 223 0.775 - - - - - 0.775 - - - - galactosidase beta 1 like [Source:HGNC Symbol;Acc:HGNC:28129]
78. PPAR PPAR 70 0.772 - - - - - 0.772 - - - -
79. F8 ENSGALG00000005077 56 0.772 - - - - - - - - - 0.772 coagulation factor VIII [Source:HGNC Symbol;Acc:HGNC:3546]
80. TNFSF10 ENSGALG00000009179 226 0.771 - - - - - 0.771 - - - - tumor necrosis factor superfamily member 10 [Source:NCBI gene;Acc:378894]
81. CAPSL ENSGALG00000013376 22 0.769 - - - - - - - - - 0.769 calcyphosine like [Source:HGNC Symbol;Acc:HGNC:28375]
82. CERKL ENSGALG00000008910 70 0.769 - - - - - 0.769 - - - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
83. PFN4 ENSGALG00000019866 53 0.767 - - - - - 0.767 - - - - profilin family member 4 [Source:HGNC Symbol;Acc:HGNC:31103]
84. SYTL5 1 0.763 - - - - - - - - - 0.763 synaptotagmin like 5, transcript variant X2
85. SHF ENSGALG00000038637 1 0.763 - - - - - - - - - 0.763 Src homology 2 domain containing F [Source:HGNC Symbol;Acc:HGNC:25116]
86. CALB1 ENSGALG00000032282 16 0.763 - - - - - - - - - 0.763 calbindin 1 [Source:NCBI gene;Acc:396519]
87. CABLES2 ENSGALG00000005345 6 0.763 - - - - - - - - - 0.763 Cdk5 and Abl enzyme substrate 2 [Source:HGNC Symbol;Acc:HGNC:16143]
88. ERN1 ENSGALG00000003476 4 0.763 - - - - - - - - - 0.763 endoplasmic reticulum to nucleus signaling 1 [Source:NCBI gene;Acc:417414]
89. CCDC96 9 0.763 - - - - - - - - - 0.763 coiled-coil domain containing 96
90. BRI3BP ENSGALG00000002913 3 0.763 - - - - - - - - - 0.763 BRI3 binding protein [Source:NCBI gene;Acc:416812]
91. AK4 ENSGALG00000011035 9 0.763 - - - - - - - - - 0.763 adenylate kinase 4 [Source:HGNC Symbol;Acc:HGNC:363]
92. ENSGALG00000006278 ENSGALG00000006278 202 0.763 - - - - - - - - - 0.763
93. DEGS2 ENSGALG00000011213 1 0.763 - - - - - - - - - 0.763 delta 4-desaturase, sphingolipid 2 [Source:HGNC Symbol;Acc:HGNC:20113]
94. PAQR5 ENSGALG00000008077 1 0.763 - - - - - - - - - 0.763 progestin and adipoQ receptor family member 5 [Source:HGNC Symbol;Acc:HGNC:29645]
95. KLHDC10 ENSGALG00000008013 4 0.763 - - - - - - - - - 0.763 kelch domain containing 10 [Source:HGNC Symbol;Acc:HGNC:22194]
96. HPS6 ENSGALG00000020741 4 0.763 - - - - - - - - - 0.763 HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:HGNC Symbol;Acc:HGNC:18817]
97. ENSGALG00000026580 ENSGALG00000026580 4 0.763 - - - - - - - - - 0.763
98. VIT ENSGALG00000010583 16 0.763 - - - - - - - - - 0.763 vitrin [Source:NCBI gene;Acc:421471]
99. HINFP ENSGALG00000006806 15 0.763 - - - - - - - - - 0.763 histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
100. gga-mir-1587 ENSGALG00000025553 1 0.763 - - - - - - - - - 0.763 gga-mir-1587 [Source:miRBase;Acc:MI0007314]

There are 46 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA