Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRAF1

Gene Name Gene ID Reads Annotation
TRAF1 ENSGALG00000001583 3 TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]











Genes with expression patterns similar to TRAF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRAF1 ENSGALG00000001583 3 4 - - - - - 1.000 1.000 1.000 - 1.000 TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
2. COG3 ENSGALG00000016980 15 2 - - - - - - - 1.000 - 1.000 component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
3. CREB3 ENSGALG00000002523 23 2 - - - - - 1.000 - 1.000 - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
4. ENSGALG00000016393 ENSGALG00000016393 3 2 - - - - - - - 1.000 - 1.000
5. PBEF1 PBEF1 25 2 - - - - - - - 1.000 - 1.000
6. RAB4A ENSGALG00000036218 20 2 - - - - - 1.000 - - - 1.000 RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
7. ENSGALG00000029127 ENSGALG00000029127 2 2 - - - - - - - 1.000 - 1.000
8. SCG5 ENSGALG00000009725 10 1.981 - - - - - 0.981 - 1.000 - - secretogranin V [Source:NCBI gene;Acc:769742]
9. UNCX ENSGALG00000039292 165 1.971 - - - - - 0.971 - 1.000 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
10. SNORA44 SNORA44 29 1.937 - - - - - - - 1.000 - 0.937
11. OLIG3 ENSGALG00000013862 51 1.924 - - - - - 1.000 0.924 - - - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
12. CCDC181 ENSGALG00000015221 10 1.913 - - - - - - - 1.000 - 0.913 coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
13. CBR4 ENSGALG00000009714 7 1 - - - - - - - 1.000 - - carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
14. CKMT1A ENSGALG00000008352 44 1 - - - - - - - 1.000 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
15. BMPR1A ENSGALG00000002003 20 1 - - - - - - - 1.000 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
16. TMEM72 ENSGALG00000026808 5 1 - - - - - - - 1.000 - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
17. GDPD4 ENSGALG00000000690 824 1 - - - - - - - 1.000 - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
18. ENSGALG00000019324 ENSGALG00000019324 0 1 - - - - - - - 1.000 - -
19. TERF2IP ENSGALG00000000903 41 1 - - - - - - - 1.000 - - TERF2 interacting protein [Source:NCBI gene;Acc:395122]
20. MMP11 ENSGALG00000005968 3 1 - - - - - - - 1.000 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
21. CPS1 ENSGALG00000002944 2 1 - - - - - - - 1.000 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
22. RBKS ENSGALG00000010043 3 1 - - - - - - - 1.000 - - ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
23. KNDC1 ENSGALG00000007007 31 1 - - - - - - - 1.000 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
24. SLC25A42 ENSGALG00000002621 6 1 - - - - - - - 1.000 - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
25. KCNQ3 ENSGALG00000037626 6 1 - - - - - 1.000 - - - - potassium voltage-gated channel subfamily Q member 3 [Source:HGNC Symbol;Acc:HGNC:6297]
26. ENSGALG00000026925 ENSGALG00000026925 119 1 - - - - - - - 1.000 - -
27. INHBB ENSGALG00000028770 2 1 - - - - - 1.000 - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]
28. ENSGALG00000026654 ENSGALG00000026654 10 1 - - - - - - - 1.000 - -
29. DTX4 ENSGALG00000010835 25 1 - - - - - - - 1.000 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
30. CRYBA2 ENSGALG00000011354 14 1 - - - - - - - 1.000 - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
31. AOC1 13 1 - - - - - - - 1.000 - - amine oxidase, copper containing 1, transcript variant X2
32. FOXG1 ENSGALG00000036364 29 1 - - - - - - - 1.000 - - forkhead box G1 [Source:NCBI gene;Acc:396110]
33. STAR ENSGALG00000003242 4 1 - - - - - - - 1.000 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
34. FHDC1 ENSGALG00000041054 34 1 - - - - - - - 1.000 - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
35. FRMD4A ENSGALG00000034992 6 1 - - - - - - - 1.000 - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
36. DNM3 ENSGALG00000033244 6 1 - - - - - - - - - 1.000 dynamin 3 [Source:HGNC Symbol;Acc:HGNC:29125]
37. HPGD ENSGALG00000010769 5 1 - - - - - - - 1.000 - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
38. MPV17L2 ENSGALG00000041429 168 1 - - - - - - - 1.000 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
39. ENSGALG00000009237 ENSGALG00000009237 3 1 - - - - - - - - - 1.000
40. WDR78 ENSGALG00000045792 6 1 - - - - - - - 1.000 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
41. AMER3 ENSGALG00000041501 5 1 - - - - - - - 1.000 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
42. KLHL40 ENSGALG00000005292 61 1 - - - - - - - 1.000 - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
43. TIMP4 ENSGALG00000004969 21 1 - - - - - - - 1.000 - - TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
44. CD40 ENSGALG00000007015 7 1 - - - - - - - 1.000 - - CD40 molecule [Source:NCBI gene;Acc:395385]
45. IL12RB1 28 1 - - - - - - - 1.000 - - interleukin 12 receptor subunit beta 1, transcript variant X4
46. CYBA ENSGALG00000029367 125 1 - - - - - - - 1.000 - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
47. RBMS3 ENSGALG00000011439 25 1 - - - - - - - 1.000 - - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
48. ENSGALG00000015793 ENSGALG00000015793 12 1 - - - - - - - - - 1.000
49. KCNRG ENSGALG00000017012 4 1 - - - - - - - - - 1.000 potassium channel regulator [Source:HGNC Symbol;Acc:HGNC:18893]
50. GRM3 ENSGALG00000006576 474 1 - - - - - - - 1.000 - - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
51. COL15A1 ENSGALG00000034119 9 1 - - - - - - - 1.000 - - collagen type XV alpha 1 chain, transcript variant X6
52. C1H7ORF60 C1H7ORF60 3 1 - - - - - - - 1.000 - -
53. EFHC2 ENSGALG00000016221 8 1 - - - - - - - - - 1.000 EF-hand domain containing 2 [Source:NCBI gene;Acc:418559]
54. DDTNFR23 ENSGALG00000006407 4 1 - - - - - - - 1.000 - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
55. CBX2 ENSGALG00000023338 10 1 - - - - - - - 1.000 - - chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
56. TLR1LB TLR1LB 65 1 - - - - - - - - - 1.000
57. VTG1 ENSGALG00000039354 17 1 - - - - - 1.000 - - - - vitellogenin 1 [Source:NCBI gene;Acc:424547]
58. SOX8 ENSGALG00000005263 218 1 - - - - - - - 1.000 - - SRY-box 8 [Source:NCBI gene;Acc:395483]
59. TSNAXIP1 ENSGALG00000001533 9 1 - - - - - - - - - 1.000 translin associated factor X interacting protein 1, transcript variant X2
60. SLC6A11 ENSGALG00000004879 16 1 - - - - - - - 1.000 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
61. HK3 ENSGALG00000027287 20 1 - - - - - - - 1.000 - - hexokinase 3, transcript variant X3
62. SLC20A1 ENSGALG00000013740 40 1 - - - - - - - 1.000 - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
63. ENSGALG00000005344 ENSGALG00000005344 6 1 - - - - - - - - - 1.000
64. SH3GL3 ENSGALG00000006045 12 1 - - - - - - - 1.000 - - SH3 domain containing GRB2 like 3, endophilin A3 [Source:NCBI gene;Acc:395201]
65. ADCY7 ENSGALG00000003837 10 1 - - - - - - - 1.000 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
66. ING1 ENSGALG00000016849 89 1 - - - - - - - 1.000 - - inhibitor of growth family member 1 [Source:HGNC Symbol;Acc:HGNC:6062]
67. TANC2 26 1 - - - - - - - 1.000 - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
68. COL4A3 ENSGALG00000038612 41 1 - - - - - - - 1.000 - - collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
69. SLC38A10 ENSGALG00000006880 34 1 - - - - - - - 1.000 - - solute carrier family 38 member 10 [Source:HGNC Symbol;Acc:HGNC:28237]
70. SPIDR SPIDR 19 1 - - - - - - - 1.000 - -
71. RBM43 ENSGALG00000012479 5 1 - - - - - - - 1.000 - - RNA binding motif protein 43 [Source:HGNC Symbol;Acc:HGNC:24790]
72. LOC395381 ENSGALG00000006717 10 1 - - - - - - - 1.000 - - ovomucin, alpha subunit, transcript variant X4
73. ENSGALG00000006495 ENSGALG00000006495 4 1 - - - - - 1.000 - - - -
74. OSBPL3 ENSGALG00000011007 23 1 - - - - - - - 1.000 - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
75. SCRIB ENSGALG00000032790 4 1 - - - - - - - - - 1.000 scribbled planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:30377]
76. ADCY1 ENSGALG00000031170 4 1 - - - - - - - 1.000 - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
77. NPBWR1 ENSGALG00000015261 6 1 - - - - - - - 1.000 - - Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
78. SIK3 ENSGALG00000007144 18 1 - - - - - - 1.000 - - - SIK family kinase 3 [Source:HGNC Symbol;Acc:HGNC:29165]
79. DMGDH ENSGALG00000004491 15 1 - - - - - - - 1.000 - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
80. LOC421081 ENSGALG00000015106 0 1 - - - - - - - 1.000 - - uncharacterized LOC421081, transcript variant X1
81. DENND5A ENSGALG00000005840 54 1 - - - - - - - 1.000 - - DENN domain containing 5A [Source:HGNC Symbol;Acc:HGNC:19344]
82. GAL12 GAL12 2 1 - - - - - - - - - 1.000
83. FOXN1 ENSGALG00000043868 3 1 - - - - - - - - - 1.000 forkhead box N1 [Source:HGNC Symbol;Acc:HGNC:12765]
84. ENSGALG00000028964 ENSGALG00000028964 46 1 - - - - - - - 1.000 - -
85. CBLN1 ENSGALG00000042664 15 1 - - - - - - - 1.000 - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
86. SLC39A12 ENSGALG00000008602 6 1 - - - - - - - 1.000 - - solute carrier family 39 member 12 [Source:HGNC Symbol;Acc:HGNC:20860]
87. RFX4 ENSGALG00000012647 119 1 - - - - - - - 1.000 - - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
88. GGT5 ENSGALG00000040504 24 1 - - - - - - - 1.000 - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
89. ANKFN1 ENSGALG00000003105 15 1 - - - - - 1.000 - - - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
90. OCM2 ENSGALG00000003465 74 1 - - - - - - - 1.000 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
91. SESN2_1 ENSGALG00000005648, ENSGALG00000037603 2 1 - - - - - - - 1.000 - - sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
92. SNTB2 ENSGALG00000027482 44 1 - - - - - - 1.000 - - - syntrophin beta 2 [Source:HGNC Symbol;Acc:HGNC:11169]
93. MAP2K1 ENSGALG00000007687 250 1 - - - - - - - 1.000 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
94. PPP1R36 ENSGALG00000040026 24 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory subunit 36 [Source:HGNC Symbol;Acc:HGNC:20097]
95. KIAA1199 KIAA1199 6 1 - - - - - - - 1.000 - -
96. ALG12 ENSGALG00000008539 20 1 - - - - - - - 1.000 - - ALG12, alpha-1,6-mannosyltransferase [Source:NCBI gene;Acc:417733]
97. C1orf74 ENSGALG00000001378 39 1 - - - - - - 1.000 - - - chromosome 1 open reading frame 74 [Source:HGNC Symbol;Acc:HGNC:26319]
98. ROS1 ENSGALG00000014913 7 1 - - - - - - - 1.000 - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
99. ABCC8 ENSGALG00000006172 41 1 - - - - - - - - - 1.000 ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
100. LRP3 ENSGALG00000004853 13 1 - - - - - - - 1.000 - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]

There are 400 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA