Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRAF1

Gene Name Gene ID Reads Annotation
TRAF1 ENSGALG00000001583 3 TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]











Genes with expression patterns similar to TRAF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRAF1 ENSGALG00000001583 3 4 - - - - - 1.000 1.000 1.000 - 1.000 TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
2. ENSGALG00000029127 ENSGALG00000029127 2 2 - - - - - - - 1.000 - 1.000
3. RAB4A ENSGALG00000036218 20 2 - - - - - 1.000 - - - 1.000 RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
4. PBEF1 PBEF1 25 2 - - - - - - - 1.000 - 1.000
5. ENSGALG00000016393 ENSGALG00000016393 3 2 - - - - - - - 1.000 - 1.000
6. CREB3 ENSGALG00000002523 23 2 - - - - - 1.000 - 1.000 - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
7. COG3 ENSGALG00000016980 15 2 - - - - - - - 1.000 - 1.000 component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
8. SCG5 ENSGALG00000009725 10 1.981 - - - - - 0.981 - 1.000 - - secretogranin V [Source:NCBI gene;Acc:769742]
9. UNCX ENSGALG00000039292 165 1.971 - - - - - 0.971 - 1.000 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
10. SNORA44 SNORA44 29 1.937 - - - - - - - 1.000 - 0.937
11. OLIG3 ENSGALG00000013862 51 1.924 - - - - - 1.000 0.924 - - - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
12. CCDC181 ENSGALG00000015221 10 1.913 - - - - - - - 1.000 - 0.913 coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
13. BTG4 ENSGALG00000007618 2 1 - - - - - - - 1.000 - - BTG anti-proliferation factor 4 [Source:NCBI gene;Acc:419781]
14. SLC6A20 ENSGALG00000039333 1 1 - - - - - - - 1.000 - - solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]
15. MYLK2 ENSGALG00000006273 5 1 - - - - - - - 1.000 - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
16. MYO1D ENSGALG00000000674 14 1 - - - - - - - 1.000 - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
17. SPG20 22 1 - - - - - - - 1.000 - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
18. PPIL6 ENSGALG00000015237 11 1 - - - - - - - 1.000 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
19. SLC6A4 ENSGALG00000004246 5 1 - - - - - - - 1.000 - - solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]
20. PICALM ENSGALG00000039037 57 1 - - - - - - - 1.000 - - phosphatidylinositol binding clathrin assembly protein [Source:HGNC Symbol;Acc:HGNC:15514]
21. VIT ENSGALG00000010583 16 1 - - - - - - - 1.000 - - vitrin [Source:NCBI gene;Acc:421471]
22. FOLR1 ENSGALG00000017343 1 1 - - - - - - - - - 1.000 folate receptor 1 [Source:NCBI gene;Acc:395638]
23. DTX1 ENSGALG00000027897 1 1 - - - - - - - - - 1.000 deltex E3 ubiquitin ligase 1 [Source:HGNC Symbol;Acc:HGNC:3060]
24. ENSGALG00000010288 ENSGALG00000010288 3 1 - - - - - - - 1.000 - -
25. LICOS LICOS 13 1 - - - - - - - 1.000 - -
26. CUBN ENSGALG00000008704 21 1 - - - - - - - 1.000 - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
27. TPH1 ENSGALG00000006236 21 1 - - - - - - - 1.000 - - tryptophan hydroxylase 1 [Source:NCBI gene;Acc:395799]
28. CREB3L1 ENSGALG00000008393 3 1 - - - - - - - 1.000 - - cAMP responsive element binding protein 3 like 1 [Source:HGNC Symbol;Acc:HGNC:18856]
29. TSGA10 ENSGALG00000016757 4 1 - - - - - - - 1.000 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
30. B2M ENSGALG00000002160 4 1 - - - - - - - 1.000 - - beta-2-microglobulin [Source:NCBI gene;Acc:414830]
31. GTF2A1L ENSGALG00000026747 13 1 - - - - - - - 1.000 - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
32. KCNK16 ENSGALG00000020049 0 1 - - - - - - - 1.000 - - potassium two pore domain channel subfamily K member 16 [Source:HGNC Symbol;Acc:HGNC:14464]
33. ENSGALG00000005482 ENSGALG00000005482 1 1 - - - - - - - 1.000 - -
34. FAM160A1 ENSGALG00000010090 10 1 - - - - - - - 1.000 - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
35. THRB ENSGALG00000011294 7 1 - - - - - - - 1.000 - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
36. PAPPA ENSGALG00000007079 6 1 - - - - - - - 1.000 - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
37. ATXN10 ENSGALG00000014234 16 1 - - - - - - - 1.000 - - ataxin 10 [Source:HGNC Symbol;Acc:HGNC:10549]
38. ENSGALG00000019602 ENSGALG00000019602 2 1 - - - - - - - 1.000 - -
39. DSCAM ENSGALG00000016138 16 1 - - - - - - - 1.000 - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
40. ENSGALG00000020320 ENSGALG00000020320 1 1 - - - - - 1.000 - - - -
41. CYR61 ENSGALG00000008661 43 1 - - - - - - - 1.000 - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
42. TRAF6 ENSGALG00000007932 12 1 - - - - - - - 1.000 - - TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
43. TMEM201 ENSGALG00000002527 2 1 - - - - - 1.000 - - - - transmembrane protein 201
44. PLEKHG3 ENSGALG00000036199 1 1 - - - - - - - - - 1.000 pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
45. PEX26 ENSGALG00000019286 1 1 - - - - - 1.000 - - - - peroxisomal biogenesis factor 26 [Source:HGNC Symbol;Acc:HGNC:22965]
46. SLC6A6 ENSGALG00000006425 31 1 - - - - - - - 1.000 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
47. FADS1L1 ENSGALG00000020485 3 1 - - - - - - - 1.000 - - fatty acid desaturase 1-like 1
48. PPP1R1B ENSGALG00000044406 6 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
49. MMP27 ENSGALG00000019060 19 1 - - - - - - - 1.000 - - matrix metallopeptidase 27 [Source:NCBI gene;Acc:395850]
50. CYP7B1 ENSGALG00000029435 3 1 - - - - - - - 1.000 - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
51. FOXI1 ENSGALG00000002105 0 1 - - - - - - - 1.000 - - forkhead box I1 [Source:HGNC Symbol;Acc:HGNC:3815]
52. SRPX2 ENSGALG00000006796 32 1 - - - - - 1.000 - - - - sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]
53. PTPRO ENSGALG00000013085 26 1 - - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
54. NIM1 NIM1 18 1 - - - - - - - 1.000 - -
55. SLC15A1 ENSGALG00000016884 10 1 - - - - - - - 1.000 - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
56. DSEL ENSGALG00000042505 92 1 - - - - - - 1.000 - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
57. LOC395991 ENSGALG00000006944 103 1 - - - - - - - 1.000 - - crescent, transcript variant X1
58. TBPL2 ENSGALG00000012145 1 1 - - - - - - - - - 1.000 TATA-box binding protein like 2 [Source:NCBI gene;Acc:776269]
59. FLT4 ENSGALG00000005802 5 1 - - - - - - - 1.000 - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
60. CFD ENSGALG00000040832 222 1 - - - - - - - 1.000 - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
61. DPF3 ENSGALG00000009352 7 1 - - - - - 1.000 - - - - double PHD fingers 3 [Source:NCBI gene;Acc:395351]
62. BRI3BP ENSGALG00000002913 3 1 - - - - - - - 1.000 - - BRI3 binding protein [Source:NCBI gene;Acc:416812]
63. RADIL ENSGALG00000004504 0 1 - - - - - - - 1.000 - - Rap associating with DIL domain [Source:HGNC Symbol;Acc:HGNC:22226]
64. USP19 ENSGALG00000006824 44 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
65. LOC423752 ENSGALG00000020899 17 1 - - - - - - - - - 1.000 uncharacterized LOC423752, transcript variant X1
66. SUSD5 ENSGALG00000042289 1 1 - - - - - - - 1.000 - - sushi domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29061]
67. ENSGALG00000010218 ENSGALG00000010218 12 1 - - - - - - - 1.000 - -
68. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - - 1.000 - -
69. MICALL2 ENSGALG00000004070 23 1 - - - - - - - 1.000 - - MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]
70. CLDN15 ENSGALG00000038964 21 1 - - - - - - - 1.000 - - claudin 15, transcript variant X4
71. HTR7 ENSGALG00000040549 1 1 - - - - - - - - - 1.000 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled [Source:NCBI gene;Acc:423794]
72. PHC2 62 1 - - - - - - - 1.000 - - polyhomeotic homolog 2
73. TMEM181 ENSGALG00000013737 19 1 - - - - - 1.000 - - - - transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
74. TNIP2 ENSGALG00000015666 28 1 - - - - - - - 1.000 - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
75. CTRB2 ENSGALG00000000038 6 1 - - - - - - - 1.000 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
76. SMIM10 SMIM10 2 1 - - - - - 1.000 - - - -
77. PHACTR3 250 1 - - - - - - - 1.000 - - phosphatase and actin regulator 3, transcript variant X4
78. PIGR ENSGALG00000000919 3 1 - - - - - - - - - 1.000 polymeric immunoglobulin receptor [Source:NCBI gene;Acc:419848]
79. NME8 ENSGALG00000029677 2 1 - - - - - - - 1.000 - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
80. ZHX3 ENSGALG00000039155 5 1 - - - - - - - - - 1.000 zinc fingers and homeoboxes 3 [Source:HGNC Symbol;Acc:HGNC:15935]
81. ENSGALG00000027796 ENSGALG00000027796 7 1 - - - - - - - 1.000 - -
82. TRIM3 ENSGALG00000034004 110 1 - - - - - - - 1.000 - - tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
83. ENSGALG00000028737 ENSGALG00000028737 24 1 - - - - - - - 1.000 - -
84. TCF20 ENSGALG00000011878 69 1 - - - - - - - 1.000 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
85. CLVS1 ENSGALG00000043172 56 1 - - - - - - - 1.000 - - clavesin 1
86. RGS13 ENSGALG00000026810 8 1 - - - - - - - 1.000 - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
87. C12orf55 C12orf55 0 1 - - - - - - - 1.000 - -
88. CSRP3 ENSGALG00000004044 456 1 - - - - - - - 1.000 - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
89. TNMD ENSGALG00000006821 19 1 - - - - - - - 1.000 - - tenomodulin [Source:NCBI gene;Acc:404530]
90. MGAT3 ENSGALG00000036743 5 1 - - - - - - - 1.000 - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
91. NLGN4 NLGN4 283 1 - - - - - - - 1.000 - -
92. SLC38A7 ENSGALG00000002313 25 1 - - - - - 1.000 - - - - solute carrier family 38 member 7, transcript variant X5
93. WDR52 WDR52 37 1 - - - - - - - 1.000 - -
94. HLCS ENSGALG00000016047 30 1 - - - - - - - 1.000 - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
95. RMST RMST 2 1 - - - - - - - 1.000 - -
96. CFTII CFTII 6 1 - - - - - - - 1.000 - -
97. KIAA1755 3 1 - - - - - - - 1.000 - - KIAA1755 ortholog, transcript variant X2
98. ENSGALG00000004157 ENSGALG00000004157 1 1 - - - - - - - 1.000 - -
99. ENSGALG00000001345 ENSGALG00000001345 5 1 - - - - - - - 1.000 - -
100. SPOCK3 ENSGALG00000009568 33 1 - - - - - - - 1.000 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]

There are 400 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA