Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRABD2A

Gene Name Gene ID Reads Annotation
TRABD2A ENSGALG00000026395 704 TraB domain containing 2A, transcript variant X3











Genes with expression patterns similar to TRABD2A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRABD2A ENSGALG00000026395 704 9 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TraB domain containing 2A, transcript variant X3
2. GHOX-7 GHOX-7 2555 3.349 - - 0.782 0.752 - 0.980 - - - 0.835
3. ZIC3 ENSGALG00000031144 863 3.233 - - 0.765 - - 0.924 - - 0.712 0.832 Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
4. PAX3 ENSGALG00000030944 2987 3.135 - - - - 0.787 0.845 - - 0.783 0.720 paired box 3 [Source:NCBI gene;Acc:374127]
5. WNT4 ENSGALG00000041708 1277 2.571 - - - 0.799 - 0.978 - 0.794 - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
6. DRAXIN ENSGALG00000004631 3122 2.48 - - - 0.736 - 0.915 - - - 0.829 dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
7. ENSGALG00000027373 ENSGALG00000027373 2129 2.385 - - - 0.761 - - 0.863 - - 0.761
8. CERCAM ENSGALG00000004986 5158 2.23 - - - - 0.760 0.768 - - - 0.702 cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
9. ZIC1 ENSGALG00000040532 6543 1.769 - - - - - 0.930 - - - 0.839 Zic family member 1 [Source:NCBI gene;Acc:374103]
10. NSG1 ENSGALG00000015010 5829 1.711 - - - - - 0.854 0.857 - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
11. DENND5B 4077 1.667 - - - - 0.788 0.879 - - - - DENN domain containing 5B, transcript variant X1
12. CLEC18B ENSGALG00000027183 284 1.614 - - - - - 0.746 - 0.868 - - C-type lectin domain family 18 member B, transcript variant X2
13. PAX-7 PAX-7 3856 1.589 - - - - - 0.778 - - - 0.811
14. ASTN1 ENSGALG00000004472 855 1.576 - - - - 0.795 0.781 - - - - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
15. DCLK2 ENSGALG00000032386 2253 1.572 - - - - - - 0.793 - - 0.779 doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
16. CHST1 ENSGALG00000008440 156 1.57 - - - - - 0.807 - - - 0.763 carbohydrate sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:1969]
17. LFNG ENSGALG00000038515 5178 1.553 - - - - - 0.822 0.731 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
18. CRABP-I ENSGALG00000003193 67258 1.539 - - - - - 0.767 - - - 0.772 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
19. SRGAP3 ENSGALG00000008378 4331 1.534 - - - - 0.734 0.800 - - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
20. RGCC ENSGALG00000016954 1282 1.534 - - - 0.774 0.760 - - - - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
21. OLIG3 ENSGALG00000013862 51 1.531 - - - - 0.823 - - - - 0.708 oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
22. NEFM ENSGALG00000000317 6992 1.517 - - - - - 0.739 0.778 - - - neurofilament medium [Source:NCBI gene;Acc:396206]
23. NDP ENSGALG00000016222 1067 1.513 - - - 0.786 - 0.727 - - - - NDP, norrin cystine knot growth factor [Source:NCBI gene;Acc:418560]
24. HES6 ENSGALG00000028415 4830 1.503 - - - - - - - - 0.803 0.700 hes family bHLH transcription factor 6
25. BTBD17 ENSGALG00000023359 87 1.484 - - - - - 0.779 - - - 0.705 BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
26. ENSGALG00000022967 ENSGALG00000022967 240 1.477 - - - 0.705 - - - - - 0.772
27. DLL1 ENSGALG00000011182 1613 1.454 - - - - - 0.708 - - - 0.746 delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
28. SMPD3 ENSGALG00000034950 4335 1.453 - - - - 0.746 0.707 - - - - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
29. PCDH8 ENSGALG00000036258 1945 1.447 - - - - 0.722 0.725 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
30. AXIN2 ENSGALG00000039200 2333 1.436 - - - - 0.704 0.732 - - - - axin 2 [Source:NCBI gene;Acc:395152]
31. PTPRZ1 ENSGALG00000040114 3410 1.418 - - - 0.717 0.701 - - - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
32. ISM1 ENSGALG00000009042 196 0.979 - - - - - 0.979 - - - - isthmin 1 [Source:HGNC Symbol;Acc:HGNC:16213]
33. LRRC4C ENSGALG00000007948 9 0.958 - - - - - 0.958 - - - - leucine rich repeat containing 4C [Source:HGNC Symbol;Acc:HGNC:29317]
34. NPAS3 ENSGALG00000029022 1950 0.927 - - - - - 0.927 - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
35. CXCR4 ENSGALG00000012357 1320 0.9 - - - - - 0.900 - - - - C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]
36. LIPG ENSGALG00000043734 2490 0.889 - - - - - 0.889 - - - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
37. gga-mir-2954 ENSGALG00000026107 462 0.884 - - - - - - - 0.884 - - gga-mir-2954 [Source:miRBase;Acc:MI0013634]
38. CFTR ENSGALG00000032986 424 0.869 - - - - - 0.869 - - - - cystic fibrosis transmembrane conductance regulator [Source:NCBI gene;Acc:100049619]
39. UPRT ENSGALG00000007793 321 0.869 - - - - - - - 0.869 - - uracil phosphoribosyltransferase homolog [Source:NCBI gene;Acc:422327]
40. BMP7 ENSGALG00000007668 6645 0.855 - - - - - 0.855 - - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
41. CAB39L ENSGALG00000017005 87 0.851 - - - - 0.851 - - - - - calcium binding protein 39 like [Source:NCBI gene;Acc:418865]
42. SLC7A11 ENSGALG00000009758 104 0.847 - - - - - 0.847 - - - - solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]
43. DBNDD2 ENSGALG00000003921 8301 0.845 - - - - - - 0.845 - - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
44. ENSGALG00000020972 ENSGALG00000020972 54 0.843 - - - - - - - 0.843 - -
45. JAM2 ENSGALG00000015746 514 0.836 - - - - - 0.836 - - - - junctional adhesion molecule 2 [Source:NCBI gene;Acc:418476]
46. PTPRQ ENSGALG00000010935 626 0.834 - - - - - - - 0.834 - - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
47. ENSGALG00000026756 ENSGALG00000026756 134 0.834 - - - - - - - 0.834 - -
48. GDPD4 ENSGALG00000000690 824 0.831 - - - - 0.831 - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
49. FZD3 ENSGALG00000042308 3356 0.824 - - - - - 0.824 - - - - frizzled class receptor 3 [Source:NCBI gene;Acc:395572]
50. RASGEF1B 2014 0.82 - - - - - - 0.820 - - - RasGEF domain family member 1B, transcript variant X8
51. GNG10 ENSGALG00000015683 6905 0.82 - - - - - 0.820 - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
52. CHGB ENSGALG00000046616 357 0.818 - - - - - - - 0.818 - - chromogranin B [Source:HGNC Symbol;Acc:HGNC:1930]
53. IRX1 ENSGALG00000030991 1474 0.818 - - - - - 0.818 - - - - iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
54. RASSF2 ENSGALG00000030432 4822 0.817 - - - - - 0.817 - - - - Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
55. RAB43 ENSGALG00000005021 5 0.815 - - - - - - - 0.815 - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
56. HECTD2 ENSGALG00000038043 177 0.814 - - - - - - - 0.814 - - HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]
57. ZP1 ENSGALG00000031916 122 0.814 - - - - - - - 0.814 - - zona pellucida glycoprotein 1 [Source:NCBI gene;Acc:395418]
58. ABHD17C ENSGALG00000006420 2220 0.814 - - - - - - 0.814 - - - abhydrolase domain containing 17C [Source:NCBI gene;Acc:415479]
59. RTN1 ENSGALG00000012006 2438 0.81 - - - - - 0.810 - - - - reticulon 1 [Source:NCBI gene;Acc:378791]
60. PPAPDC1A PPAPDC1A 2790 0.808 - - - - - - 0.808 - - -
61. PAX-6 PAX-6 2650 0.806 - - - - - - 0.806 - - -
62. LRP4 ENSGALG00000032181 1756 0.804 - - - - 0.804 - - - - - LDL receptor related protein 4 [Source:HGNC Symbol;Acc:HGNC:6696]
63. KANSL1L ENSGALG00000002866 44 0.8 - - - - - 0.800 - - - - KAT8 regulatory NSL complex subunit 1-like, transcript variant X1
64. NMRAL1 ENSGALG00000029820 29 0.8 - - - - - - - 0.800 - - NmrA like redox sensor 1 [Source:NCBI gene;Acc:416672]
65. EDIL3 ENSGALG00000015630 7 0.8 - - - - - 0.800 - - - - EGF like repeats and discoidin domains 3 [Source:HGNC Symbol;Acc:HGNC:3173]
66. SRRL ENSGALG00000002638 26 0.8 - - - - - - - 0.800 - - serine racemase-like, transcript variant X8
67. ELOVL4 ENSGALG00000015876 853 0.798 - - - - - 0.798 - - - - ELOVL fatty acid elongase 4 [Source:NCBI gene;Acc:421850]
68. ECSCR ENSGALG00000024379 313 0.795 - - - - - - - 0.795 - - endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
69. BBS9 ENSGALG00000031650 13 0.794 - - - - - - - 0.794 - - Bardet-Biedl syndrome 9, transcript variant X5
70. ENSGALG00000018499 ENSGALG00000018499 100 0.794 - - - - 0.794 - - - - -
71. KIAA1377 KIAA1377 48 0.79 - - - - - - - 0.790 - -
72. TECPR1 ENSGALG00000003507 20 0.789 - - - - - - - - - 0.789 tectonin beta-propeller repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:22214]
73. SWAP70 ENSGALG00000005750 32 0.787 - - - - - - - 0.787 - - switching B cell complex subunit SWAP70 [Source:NCBI gene;Acc:423044]
74. MAK ENSGALG00000012770 32 0.787 - - - - - 0.787 - - - - male germ cell associated kinase [Source:HGNC Symbol;Acc:HGNC:6816]
75. PLCH2 ENSGALG00000001207 7 0.787 - - - - - 0.787 - - - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
76. COPS8 ENSGALG00000033385 10166 0.786 - - - - - - 0.786 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
77. GABRA2 ENSGALG00000014206 19 0.783 - - - - - - - 0.783 - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
78. INSC ENSGALG00000032558 74 0.783 - - - - - - - 0.783 - - INSC, spindle orientation adaptor protein [Source:HGNC Symbol;Acc:HGNC:33116]
79. PRKRIR PRKRIR 46 0.783 - - - - - - - 0.783 - -
80. C17orf75 ENSGALG00000003434 4262 0.783 - - - - - 0.783 - - - - chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]
81. MAB21L2 4841 0.782 - - - - 0.782 - - - - - mab-21-like 2 (C. elegans)
82. ZFYVE19 ENSGALG00000008460 2750 0.781 - - - - - - 0.781 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
83. PTPRZ1_1 ENSGALG00000040114 30 0.78 - - - - - - - 0.780 - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
84. DAB2IP ENSGALG00000001419 100 0.779 - - - - - 0.779 - - - - DAB2 interacting protein [Source:HGNC Symbol;Acc:HGNC:17294]
85. VIP ENSGALG00000013604 153 0.779 - - - - - 0.779 - - - - vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]
86. FAM214B ENSGALG00000002069, ENSGALG00000038279 213 0.776 - - - - - - - 0.776 - - family with sequence similarity 214 member B, transcript variant X14
87. DBN1 ENSGALG00000033405 216 0.776 - - - - - - - 0.776 - - drebrin 1 [Source:NCBI gene;Acc:396496]
88. snoZ39 snoZ39 2 0.776 - - - - - - - 0.776 - -
89. NTM ENSGALG00000001437 584 0.776 - - - - - 0.776 - - - - neurotrimin [Source:NCBI gene;Acc:395450]
90. ALKBH3 ENSGALG00000041309 7 0.776 - - - - - - - 0.776 - - alkB homolog 3, alpha-ketoglutaratedependent dioxygenase [Source:NCBI gene;Acc:423169]
91. SPATA4 ENSGALG00000010822 4 0.776 - - - - - - - 0.776 - - spermatogenesis associated 4 [Source:NCBI gene;Acc:422571]
92. ACACB 6 0.776 - - - - - - - 0.776 - - acetyl-CoA carboxylase beta
93. ENSGALG00000023027 ENSGALG00000023027 5 0.776 - - - - - - - 0.776 - -
94. GABRA5 ENSGALG00000016744 12 0.776 - - - - - - - 0.776 - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
95. TREM-B1 ENSGALG00000003361 8 0.776 - - - - - - - 0.776 - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
96. MUC13 7 0.776 - - - - - - - 0.776 - - mucin 13, cell surface associated, transcript variant X10
97. GTPBP6 ENSGALG00000016717 17 0.776 - - - - - - - 0.776 - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
98. SUSD1 ENSGALG00000015677 12 0.776 - - - - - - - 0.776 - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
99. GPR17 ENSGALG00000037153 3 0.776 - - - - - - - 0.776 - - G protein-coupled receptor 17 [Source:HGNC Symbol;Acc:HGNC:4471]
100. SFT2D2 ENSGALG00000019228 10 0.776 - - - - - - - 0.776 - - SFT2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25140]

There are 159 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA