Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TPM4

Gene Name Gene ID Reads Annotation
TPM4 ENSGALG00000002563 15621 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]











Genes with expression patterns similar to TPM4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TPM4 ENSGALG00000002563 15621 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
2. RBBP8 ENSGALG00000014982 3255 2.305 - - 0.773 - - - - - 0.805 0.727 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
3. WDSUB1 ENSGALG00000012574 2038 2.26 - - - 0.760 - - - - 0.754 0.746 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
4. TTLL5 ENSGALG00000010340 4875 2.204 - - - 0.716 - - - 0.727 0.761 - tubulin tyrosine ligase like 5 [Source:NCBI gene;Acc:423367]
5. MBSP MBSP 5634 1.694 - - 0.891 - - - - - 0.803 -
6. ALMS1 ENSGALG00000044620 570 1.682 - - - - - - - - 0.874 0.808 ALMS1, centrosome and basal body associated protein, transcript variant X1
7. MTSS1 ENSGALG00000041969 1312 1.661 - - - - - - - - 0.880 0.781 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
8. VWF ENSGALG00000017272 1012 1.65 - - - - - - - - 0.878 0.772 Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
9. PCLO 249 1.643 - - - - - - - - 0.885 0.758 piccolo presynaptic cytomatrix protein
10. FSTL4 ENSGALG00000031487 529 1.64 - - - - - - - - 0.875 0.765 follistatin like 4 [Source:NCBI gene;Acc:395163]
11. CHAMP1 ENSGALG00000016813 508 1.63 - - 0.773 - - - - - 0.857 - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
12. LRRN4 ENSGALG00000008815 481 1.627 - - - - - - - - 0.841 0.786 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
13. FASTKD3 ENSGALG00000033521 1186 1.625 - - - - - - - - 0.849 0.776 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
14. DCP1B 1306 1.62 - - 0.778 - - - - - 0.842 - decapping mRNA 1B
15. FUBP1 ENSGALG00000008939 2850 1.619 - - - - - - - - 0.840 0.779 far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
16. ZDHHC7 ENSGALG00000042522 1774 1.609 - - 0.813 - - - - - 0.796 - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
17. YBX3 ENSGALG00000031890 819 1.606 - - 0.765 - - - - - 0.841 - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
18. CNTRL ENSGALG00000001513 1773 1.597 - - 0.841 - - - - - - 0.756 centriolin [Source:NCBI gene;Acc:417121]
19. TIAR TIAR 2471 1.594 - - 0.809 - - - - - - 0.785
20. IQGAP1 ENSGALG00000030162 1047 1.571 - - - - - - - - 0.807 0.764 IQ motif containing GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:6110]
21. PROM1 ENSGALG00000014496 2494 1.566 - - - - - - - - 0.789 0.777 prominin 1 [Source:NCBI gene;Acc:422825]
22. SNORA73 SNORA73 1644 1.566 - - - - - - - - 0.773 0.793
23. PRPF38B ENSGALG00000001972 2009 1.555 - - 0.848 - - - - - - 0.707 pre-mRNA processing factor 38B
24. AFG3L2 ENSGALG00000013853 1138 1.554 - - - - - - - - 0.787 0.767 AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
25. MIB1 ENSGALG00000014974 3583 1.552 - - 0.738 - - - - - 0.814 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
26. PCDH17 ENSGALG00000016941 1006 1.552 - - 0.843 - - - - - 0.709 - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
27. RALGAPA2 240 1.552 - - 0.757 - - - - - 0.795 - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
28. ENSGALG00000014171 ENSGALG00000014171 10383 1.549 - - - - - - - - 0.763 0.786
29. SLK ENSGALG00000008318 2220 1.533 - - 0.818 - - - - - - 0.715 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
30. WHSC1 1712 1.529 - - 0.785 - - - - - - 0.744 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
31. TTPAL ENSGALG00000004244 2734 1.527 - - 0.765 - - - - - 0.762 - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
32. BTG1L ENSGALG00000004676 2293 1.526 - - 0.823 0.703 - - - - - - protein BTG1-like
33. LRRC71 ENSGALG00000027351 695 1.514 - - 0.748 - - - - - 0.766 - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
34. ENSGALG00000003515 ENSGALG00000003515 1003 1.511 - - - - - - - - 0.720 0.791
35. SLC37A3 ENSGALG00000012849 836 1.511 - - 0.747 - - - - - 0.764 - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
36. GTF3C1 ENSGALG00000007387 5788 1.51 - - - - - - - - 0.725 0.785 general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
37. GNMT ENSGALG00000043290 3288 1.51 - - - - - - - 0.793 0.717 - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
38. TWSG1 ENSGALG00000008400 1869 1.51 - - 0.766 - - - - - - 0.744 twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
39. FANCB ENSGALG00000016569 1193 1.508 - - - - - - - - 0.779 0.729 FA complementation group B [Source:NCBI gene;Acc:418628]
40. ABHD13 ENSGALG00000016853 4975 1.503 - - 0.721 - - - - 0.782 - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
41. WTAP ENSGALG00000011660 10811 1.501 - - 0.751 - - - - - 0.750 - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
42. EXOSC8 ENSGALG00000017048 2939 1.498 - - - - - - - 0.770 0.728 - exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
43. ZC3H11A ENSGALG00000000541 2712 1.497 - - 0.763 - - - - - - 0.734 zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
44. NCOR1 ENSGALG00000004477 4534 1.496 - - - - - - - - 0.728 0.768 nuclear receptor corepressor 1 [Source:HGNC Symbol;Acc:HGNC:7672]
45. ERCC6 ENSGALG00000006254 3452 1.494 - - 0.702 - - - - - - 0.792 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
46. RTN4R ENSGALG00000007732 1515 1.491 - - - 0.722 - - - - - 0.769 reticulon 4 receptor
47. PPM1E ENSGALG00000005061 2606 1.483 - - - - - - - - 0.712 0.771 protein phosphatase, Mg2+/Mn2+ dependent 1E [Source:HGNC Symbol;Acc:HGNC:19322]
48. STRBP ENSGALG00000029927 3516 1.483 - - 0.702 - - - 0.781 - - - spermatid perinuclear RNA binding protein [Source:NCBI gene;Acc:417105]
49. GTF2H2 ENSGALG00000002399 2361 1.481 - - 0.778 - - - 0.703 - - - general transcription factor IIH subunit 2, transcript variant X2
50. TERF1 ENSGALG00000037453 4497 1.479 - - - 0.727 - - - - 0.752 - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
51. AGPS ENSGALG00000009236 2250 1.476 - - - - - - 0.705 - - 0.771 alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
52. HYAL3 ENSGALG00000029000 712 1.476 - - 0.734 - - - - - - 0.742 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
53. CLSPN ENSGALG00000002346 2590 1.474 - - - - - - 0.721 - - 0.753 claspin [Source:NCBI gene;Acc:428223]
54. RBM5 30998 1.473 - - - - - - - - 0.725 0.748 RNA binding motif protein 5, transcript variant X1
55. UCHL3 ENSGALG00000016921 16208 1.471 - - - - - - 0.732 - - 0.739 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
56. GGA.31975 GGA.31975 8825 1.471 - - - - - - 0.740 - - 0.731
57. YAF2 ENSGALG00000009540 8452 1.47 - - - - - - - - 0.721 0.749 YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
58. FTD FTD 3041 1.469 - - 0.751 - - - - - - 0.718
59. QSER1 ENSGALG00000012030 4490 1.468 - - 0.742 - - - - - - 0.726 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
60. CPT2 ENSGALG00000010681 3211 1.464 - - 0.745 - - - - - - 0.719 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
61. SMC4 ENSGALG00000009553 15715 1.464 - - 0.759 - - - - - - 0.705 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
62. SLC39A13 ENSGALG00000008122 2003 1.463 - - - - - - - - 0.717 0.746 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
63. PLK2 ENSGALG00000014725 1736 1.462 - - 0.732 - - - - - 0.730 - polo like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19699]
64. CFC1 ENSGALG00000012623 3164 1.453 0.733 - - - - - - - 0.720 - cripto, FRL-1, cryptic family 1 [Source:NCBI gene;Acc:395437]
65. INCENP ENSGALG00000007537 16617 1.453 - - - - - - 0.740 0.713 - - inner centromere protein [Source:NCBI gene;Acc:396270]
66. SLC25A24 ENSGALG00000001938 3671 1.453 - - - - - - 0.721 0.732 - - solute carrier family 25 member 24 [Source:HGNC Symbol;Acc:HGNC:20662]
67. GXYLT1 ENSGALG00000009532 5682 1.444 - - - - - - - 0.701 - 0.743 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
68. CAMSAP1 ENSGALG00000001692 2617 1.441 - - 0.737 - - - - - - 0.704 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
69. TOX2 ENSGALG00000003106 2472 1.437 - - 0.727 - - - 0.710 - - - TOX high mobility group box family member 2, transcript variant X1
70. CCNC ENSGALG00000015471 6497 1.435 - - - - - - - 0.723 0.712 - cyclin C [Source:NCBI gene;Acc:421791]
71. NUBP1 ENSGALG00000007241 3791 1.427 - - 0.704 - - - - - - 0.723 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
72. AHCTF1 ENSGALG00000010630 4809 1.426 - - - - - - 0.723 - 0.703 - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
73. TMEM167A ENSGALG00000027332 13862 1.422 - - 0.704 - - - 0.718 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
74. FECH ENSGALG00000038461 3491 1.411 - - 0.702 - - - - - - 0.709 ferrochelatase [Source:NCBI gene;Acc:374020]
75. MYL2 ENSGALG00000004582 2245 0.941 0.941 - - - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
76. TNNC1 ENSGALG00000001459 7110 0.941 0.941 - - - - - - - - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
77. MSANTD4 ENSGALG00000017177 3306 0.931 - - - - - - - - 0.931 - Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:HGNC Symbol;Acc:HGNC:29383]
78. ACTC1 ENSGALG00000009844 20914 0.917 0.917 - - - - - - - - - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
79. HSPB7L ENSGALG00000028183 795 0.917 0.917 - - - - - - - - - heat shock protein beta-7-like
80. MYBPC3 ENSGALG00000008148 315 0.916 0.916 - - - - - - - - - myosin binding protein C, cardiac [Source:NCBI gene;Acc:396013]
81. MYL3 ENSGALG00000005448 3379 0.916 0.916 - - - - - - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
82. TRIM55 ENSGALG00000041327 1097 0.911 0.911 - - - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
83. CEP170 ENSGALG00000010733 4177 0.909 - - - - - - - - 0.909 - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
84. MAP3K5 ENSGALG00000013892 565 0.907 - - - - - - - - 0.907 - mitogen-activated protein kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6857]
85. TECRL ENSGALG00000038771 126 0.903 0.903 - - - - - - - - - trans-2,3-enoyl-CoA reductase like [Source:HGNC Symbol;Acc:HGNC:27365]
86. CAMKK1 ENSGALG00000001617 64 0.897 - - - - - - - - 0.897 - calcium/calmodulin dependent protein kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:1469]
87. CEP112 ENSGALG00000034989 123 0.896 - - - - - - - - 0.896 - centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
88. ECM2 ENSGALG00000004695 375 0.896 - - - - - - - - 0.896 - extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:3154]
89. NTL ENSGALG00000005156 278 0.896 - - - - - - - - 0.896 - neurotrypsin-like, transcript variant X7
90. SNCAIP ENSGALG00000005330 2425 0.894 - - - - - - - - 0.894 - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
91. EF1A EF1A 2378 0.894 0.894 - - - - - - - - -
92. F5 ENSGALG00000029298 1850 0.893 - - - - - - - - 0.893 - coagulation factor V [Source:HGNC Symbol;Acc:HGNC:3542]
93. RAD17 ENSGALG00000015571 1374 0.892 - - - - - - - - 0.892 - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
94. FAM120B ENSGALG00000011180 101 0.891 - - - - - - - - 0.891 - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
95. DTX3L ENSGALG00000012075 399 0.889 - - - - - - - - 0.889 - deltex E3 ubiquitin ligase 3L [Source:HGNC Symbol;Acc:HGNC:30323]
96. SH3D19 ENSGALG00000010081 52 0.886 - - - - - - - - 0.886 - SH3 domain containing 19 [Source:HGNC Symbol;Acc:HGNC:30418]
97. CARS2 ENSGALG00000016847 3814 0.886 - - - - - - - - 0.886 - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
98. RUFY2 1442 0.885 - - - - - - - - 0.885 - RUN and FYVE domain containing 2, transcript variant X1
99. MDN1 ENSGALG00000015733 2352 0.885 - - - - - - - - 0.885 - midasin AAA ATPase 1, transcript variant X1
100. ACTN2 ENSGALG00000014463 1724 0.884 0.884 - - - - - - - - - actinin alpha 2 [Source:NCBI gene;Acc:396263]

There are 925 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA