Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TOP2B

Gene Name Gene ID Reads Annotation
TOP2B ENSGALG00000011300 25048 DNA topoisomerase 2-beta [Source:NCBI gene;Acc:395966]











Genes with expression patterns similar to TOP2B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TOP2B ENSGALG00000011300 25048 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA topoisomerase 2-beta [Source:NCBI gene;Acc:395966]
2. GBAS 18453 1.624 - - 0.709 - - - - 0.915 - - glioblastoma amplified sequence
3. MINOS1 ENSGALG00000004039 37740 1.621 - - - - 0.814 - 0.807 - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
4. ELOVL5 ENSGALG00000016314 18163 1.591 - - - - 0.849 - 0.742 - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
5. VMP1 ENSGALG00000005160 12859 1.58 - - - - 0.800 - 0.780 - - - vacuole membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:29559]
6. PSMG3 ENSGALG00000004203 11240 1.577 - - - - 0.813 - - - - 0.764 proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
7. TBL1X ENSGALG00000040006 28597 1.563 - - - - 0.810 - - 0.753 - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
8. VMA21 ENSGALG00000009065 6432 1.558 - - - - 0.809 - - - - 0.749 VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
9. FAM96B 14435 1.543 - - - - - - 0.781 - - 0.762 family with sequence similarity 96 member B
10. STK4 ENSGALG00000004098 11366 1.543 - - - - 0.803 - 0.740 - - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
11. ATP2B2 ENSGALG00000030908 584 1.543 - - 0.749 - - - - - - 0.794 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
12. RAB34 ENSGALG00000026315 1193 1.537 - - 0.786 - - - - - - 0.751 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
13. ZNF276 ENSGALG00000000513 2410 1.522 - - 0.709 - - - - - - 0.813 zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
14. SDCBP ENSGALG00000015436 1228 1.508 - - 0.735 - 0.773 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
15. PDCD4 ENSGALG00000008700 574 1.493 - - 0.738 - - - - - - 0.755 programmed cell death 4 [Source:NCBI gene;Acc:374191]
16. LZIC ENSGALG00000002616 9052 1.492 - - 0.701 - 0.791 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
17. TLK2 ENSGALG00000000410 4690 1.491 - - 0.726 - - - - 0.765 - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
18. NARS ENSGALG00000040506 9506 1.485 - - - - 0.778 - 0.707 - - - asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
19. PHF2 ENSGALG00000039208 2003 1.472 - - 0.750 - - - - - - 0.722 PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
20. STRN3 ENSGALG00000040464 9045 1.465 - - 0.751 - - - 0.714 - - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
21. DLX5 ENSGALG00000009129 1395 1.46 - - 0.737 - - - - - - 0.723 distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
22. MAN1A1 ENSGALG00000014878 1061 1.456 - - 0.739 - - - - - - 0.717 mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
23. PSMA1 ENSGALG00000006022 26724 1.453 - - - - 0.740 - - - - 0.713 proteasome subunit alpha 1 [Source:NCBI gene;Acc:395874]
24. CREPT CREPT 17142 1.446 - - - - - - 0.729 - - 0.717
25. AATF ENSGALG00000005420 6501 1.443 - - - - - - 0.711 0.732 - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
26. PABPC1 ENSGALG00000030280 23934 0.909 - - - - - - - 0.909 - - poly(A) binding protein cytoplasmic 1 [Source:NCBI gene;Acc:430997]
27. RPL12 ENSGALG00000008806 229862 0.889 - - - - - - 0.889 - - - ribosomal protein L12 [Source:NCBI gene;Acc:417264]
28. HP1BP3 ENSGALG00000010079 33723 0.878 - - - - 0.878 - - - - - heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]
29. G3BP1 ENSGALG00000004160 36795 0.865 - - - - 0.865 - - - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
30. KPNA2 ENSGALG00000003584 76058 0.864 - - - - 0.864 - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
31. COPS4 ENSGALG00000011130 21515 0.863 - - - - - - 0.863 - - - COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
32. PSMC2 ENSGALG00000008236 25980 0.859 - - - - - - 0.859 - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
33. AMDHD2 ENSGALG00000009234 1730 0.858 - - - - - - - - - 0.858 Gallus gallus amidohydrolase domain containing 2 (AMDHD2), mRNA. [Source:RefSeq mRNA;Acc:NM_001345995]
34. NDUFB10 ENSGALG00000005465 41984 0.857 - - - - - - 0.857 - - - NADH:ubiquinone oxidoreductase subunit B10 [Source:HGNC Symbol;Acc:HGNC:7696]
35. MCM4 ENSGALG00000012915 13151 0.855 - - - - - - 0.855 - - - minichromosome maintenance complex component 4
36. CNTN1 ENSGALG00000009523 158 0.854 - - - - - - - - - 0.854 contactin 1 [Source:NCBI gene;Acc:417786]
37. OSBP ENSGALG00000030548 439 0.854 - - - - - - - - - 0.854 oxysterol binding protein [Source:HGNC Symbol;Acc:HGNC:8503]
38. MRPS5 ENSGALG00000008550 1707 0.853 - - - - - - - - - 0.853 mitochondrial ribosomal protein S5 [Source:NCBI gene;Acc:416706]
39. AGPAT5 ENSGALG00000016329 1399 0.852 - - - - - - - - - 0.852 1-acylglycerol-3-phosphate O-acyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:20886]
40. UBE2D3 ENSGALG00000012311 39831 0.848 - - - - 0.848 - - - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
41. PDIA6 ENSGALG00000016447 51308 0.847 - - - - - - 0.847 - - - protein disulfide isomerase family A member 6 [Source:HGNC Symbol;Acc:HGNC:30168]
42. GSPT1 15580 0.845 - - - - 0.845 - - - - - G1 to S phase transition 1, transcript variant X1
43. KIF2A ENSGALG00000014737 16391 0.839 - - - - 0.839 - - - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
44. SLC16A1 ENSGALG00000001717 18566 0.838 - - - - 0.838 - - - - - solute carrier family 16 member 1 [Source:NCBI gene;Acc:419875]
45. GARNL3 ENSGALG00000000847 3423 0.838 - - - - - - - - - 0.838 GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
46. TBC1D32 ENSGALG00000014876 681 0.836 - - - - - - - - - 0.836 TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
47. SELT SELT 25524 0.836 - - - - 0.836 - - - - -
48. DENR ENSGALG00000003795 30805 0.834 - - - - 0.834 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
49. CEPT1 ENSGALG00000000142 4219 0.834 - - - - - - - - - 0.834 choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
50. VPRBP VPRBP 4037 0.833 - - - - - - - - - 0.833
51. MYBL2 ENSGALG00000003503 15875 0.832 - - - - 0.832 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
52. PRPF8 ENSGALG00000002943 31189 0.831 - - - - - - 0.831 - - - pre-mRNA processing factor 8 [Source:HGNC Symbol;Acc:HGNC:17340]
53. MAGOH 28688 0.831 - - - - - - 0.831 - - - mago homolog, exon junction complex core component
54. PDCD7 ENSGALG00000021027 3807 0.831 - - - - - - - - - 0.831 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
55. AHSA2 1504 0.83 - - - - - - - - - 0.830 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
56. MASP1 ENSGALG00000007419 141 0.83 - - - - - - - - - 0.830 mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
57. HDLBP ENSGALG00000005823 24636 0.829 - - - - 0.829 - - - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
58. TSPAN12 ENSGALG00000009029 2145 0.829 - - - - - - - - - 0.829 tetraspanin 12 [Source:NCBI gene;Acc:417763]
59. EIF3M ENSGALG00000012109 38661 0.829 - - - - - - 0.829 - - - eukaryotic translation initiation factor 3 subunit M [Source:NCBI gene;Acc:421602]
60. ACTG1_1 ENSGALG00000001381 64662 0.827 - - - - 0.827 - - - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
61. CHMP5 ENSGALG00000013160 13347 0.827 - - - - 0.827 - - - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
62. SLC30A4 ENSGALG00000005703 5696 0.826 - - - - 0.826 - - - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
63. COMMD2 ENSGALG00000028001 18981 0.826 - - - - 0.826 - - - - - COMM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24993]
64. PIGW ENSGALG00000023554 951 0.825 - - - - - - - - - 0.825 phosphatidylinositol glycan anchor biosynthesis class W [Source:HGNC Symbol;Acc:HGNC:23213]
65. MRPL19 ENSGALG00000016731 22670 0.825 - - - - - - 0.825 - - - mitochondrial ribosomal protein L19, transcript variant X1
66. DDX27 ENSGALG00000006974 18388 0.825 - - - - 0.825 - - - - - DEAD-box helicase 27 [Source:NCBI gene;Acc:419308]
67. CDCA4 ENSGALG00000011692 10381 0.824 - - - - 0.824 - - - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
68. PPIB ENSGALG00000002210 46778 0.824 - - - - - - 0.824 - - - peptidylprolyl isomerase B (cyclophilin B) [Source:NCBI gene;Acc:396447]
69. PSMD3 ENSGALG00000033162 25615 0.823 - - - - 0.823 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
70. LRP5 ENSGALG00000029533 385 0.823 - - - - - - - - - 0.823 LDL receptor related protein 5 [Source:NCBI gene;Acc:423114]
71. SLMO2 SLMO2 9207 0.823 - - - - 0.823 - - - - -
72. CSTF3 ENSGALG00000011685 4711 0.823 - - - - - - - - - 0.823 cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
73. SRP19 ENSGALG00000000218 14207 0.822 - - - - 0.822 - - - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
74. SPRED1 ENSGALG00000028203 6520 0.821 - - - - 0.821 - - - - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
75. STAM ENSGALG00000035287 7649 0.82 - - - - - - - - - 0.820 signal transducing adaptor molecule [Source:HGNC Symbol;Acc:HGNC:11357]
76. ACAT2 ENSGALG00000011659 12825 0.82 - - - - 0.820 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
77. MGST1 ENSGALG00000013098 17632 0.819 - - - - - - 0.819 - - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
78. PTBP1 ENSGALG00000001962 66983 0.819 - - - - - - 0.819 - - - polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
79. LGALS1 ENSGALG00000012420 13993 0.819 - - - - 0.819 - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
80. BZFP1 ENSGALG00000027546 632 0.819 - - - - - - - - - 0.819 B-locus zinc finger protein 1 [Source:NCBI gene;Acc:396247]
81. TRIM24 ENSGALG00000012823 2725 0.818 - - - - - - - - - 0.818 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
82. ZC3H6 ENSGALG00000008269 10353 0.818 - - - - 0.818 - - - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
83. HDAC4 ENSGALG00000004288 2124 0.818 - - - - - - - - - 0.818 histone deacetylase 4 [Source:NCBI gene;Acc:374207]
84. MCFD2 ENSGALG00000010017 8905 0.818 - - - - - - - - - 0.818 multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
85. DDOST ENSGALG00000010073 18707 0.817 - - - - 0.817 - - - - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
86. RCC2 ENSGALG00000031684 28067 0.816 - - - - - - 0.816 - - - regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:HGNC:30297]
87. SPEN ENSGALG00000036932 9688 0.816 - - - - 0.816 - - - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
88. UQCRH ENSGALG00000017380 55734 0.816 - - - - 0.816 - - - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
89. FBXL17 ENSGALG00000000276 2443 0.815 - - - - - - - - - 0.815 F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
90. SRGAP1 ENSGALG00000009825 6753 0.815 - - - - 0.815 - - - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
91. MZT1 ENSGALG00000016932 9269 0.815 - - - - - - - 0.815 - - mitotic spindle organizing protein 1 [Source:NCBI gene;Acc:418822]
92. INTS8 ENSGALG00000037955 3349 0.815 - - - - - - - - - 0.815 integrator complex subunit 8 [Source:NCBI gene;Acc:420230]
93. ARGLU1 ENSGALG00000016855 25633 0.814 - - - - 0.814 - - - - - arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
94. WDR92 ENSGALG00000008760 3934 0.814 - - - - 0.814 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
95. PBRM1 ENSGALG00000037455 6450 0.813 - - - - 0.813 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
96. GID4 ENSGALG00000004929 1949 0.813 - - - - - - - - - 0.813 GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
97. Mar-05 Mar-05 6330 0.812 - - - - 0.812 - - - - -
98. DLD ENSGALG00000007931 11011 0.812 - - - - 0.812 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
99. WNK2 ENSGALG00000038850 4712 0.812 - - - - 0.812 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
100. LGMN ENSGALG00000010811 7401 0.812 - - - - 0.812 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]

There are 543 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA