Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TOP2A

Gene Name Gene ID Reads Annotation
TOP2A ENSGALG00000003922 7726 topoisomerase (DNA) II alpha [Source:NCBI gene;Acc:395570]











Genes with expression patterns similar to TOP2A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TOP2A ENSGALG00000003922 7726 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 topoisomerase (DNA) II alpha [Source:NCBI gene;Acc:395570]
2. SURF6 ENSGALG00000038413 11178 1.679 0.800 - 0.879 - - - - - - - surfeit 6 [Source:NCBI gene;Acc:417160]
3. THOC2 ENSGALG00000008507 9501 1.678 0.778 - 0.900 - - - - - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
4. RNF20 ENSGALG00000015548 7199 1.648 0.732 - 0.916 - - - - - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
5. RBM25 ENSGALG00000009332 10842 1.643 0.756 - 0.887 - - - - - - - RNA binding motif protein 25 [Source:NCBI gene;Acc:423250]
6. HMGB1 ENSGALG00000042875 83509 1.612 0.855 0.757 - - - - - - - - high mobility group box 1 [Source:NCBI gene;Acc:395724]
7. LCMT1 ENSGALG00000005973 1300 1.611 - - 0.901 - - - - 0.710 - - leucine carboxyl methyltransferase 1 [Source:NCBI gene;Acc:416565]
8. PHF3 ENSGALG00000016267 4148 1.608 0.784 - 0.824 - - - - - - - PHD finger protein 3 [Source:HGNC Symbol;Acc:HGNC:8921]
9. ANKRD11 ENSGALG00000006222 12327 1.587 0.861 0.726 - - - - - - - - ankyrin repeat domain 11, transcript variant X2
10. ATRX ENSGALG00000007843 34172 1.562 0.836 0.726 - - - - - - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
11. HNRNPH1 HNRNPH1 8819 1.555 0.710 - 0.845 - - - - - - -
12. TMEM132C ENSGALG00000002714 2644 1.545 0.729 - 0.816 - - - - - - - transmembrane protein 132C, transcript variant X1
13. PNN ENSGALG00000010167 6417 1.527 0.814 0.713 - - - - - - - - pinin, desmosome associated protein [Source:HGNC Symbol;Acc:HGNC:9162]
14. FECH ENSGALG00000038461 3491 1.524 - - 0.813 - - - - 0.711 - - ferrochelatase [Source:NCBI gene;Acc:374020]
15. PABPC1 ENSGALG00000030280 23934 1.516 0.813 0.703 - - - - - - - - poly(A) binding protein cytoplasmic 1 [Source:NCBI gene;Acc:430997]
16. OVCA2 ENSGALG00000045371 2862 1.484 - - 0.779 - - - - 0.705 - - OVCA2, serine hydrolase domain containing [Source:HGNC Symbol;Acc:HGNC:24203]
17. BUB1B ENSGALG00000036892 2988 1.448 0.723 0.725 - - - - - - - - BUB1 mitotic checkpoint serine/threonine kinase B [Source:NCBI gene;Acc:378922]
18. ENSGALG00000018384 ENSGALG00000018384 426923 1.429 0.703 0.726 - - - - - - - -
19. LBR 6686 0.946 - - 0.946 - - - - - - - lamin B receptor, transcript variant X4
20. ZC3H11A ENSGALG00000000541 2712 0.935 - - 0.935 - - - - - - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
21. ATP10D ENSGALG00000014192 94 0.929 - - 0.929 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
22. SNN ENSGALG00000028876 1687 0.926 - - 0.926 - - - - - - - stannin [Source:NCBI gene;Acc:416429]
23. RALGDS ENSGALG00000003412 4478 0.926 - - 0.926 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
24. SLK ENSGALG00000008318 2220 0.92 - - 0.920 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
25. ATF7IP ENSGALG00000011814 1571 0.919 - - 0.919 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
26. MTHFSD ENSGALG00000033322 824 0.919 - - 0.919 - - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
27. CGNL1 ENSGALG00000004294 1177 0.916 - - 0.916 - - - - - - - cingulin like 1 [Source:HGNC Symbol;Acc:HGNC:25931]
28. SMARCAD1 ENSGALG00000037339 149 0.914 - - 0.914 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
29. TUBGCP3 ENSGALG00000016836 332 0.913 - - 0.913 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
30. CPSF3 ENSGALG00000016424 342 0.913 - - 0.913 - - - - - - - cleavage and polyadenylation specific factor 3 [Source:HGNC Symbol;Acc:HGNC:2326]
31. PCYT1B 190 0.911 - - 0.911 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
32. TFAP2C ENSGALG00000007690 768 0.91 - - 0.910 - - - - - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
33. WHSC1 1712 0.91 - - 0.910 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
34. MBSP MBSP 5634 0.906 - - 0.906 - - - - - - -
35. GTF2H2 ENSGALG00000002399 2361 0.906 - - 0.906 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
36. PCDH17 ENSGALG00000016941 1006 0.905 - - 0.905 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
37. BBX ENSGALG00000015353 1281 0.905 - - 0.905 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
38. SOBP ENSGALG00000043047 147 0.901 - - 0.901 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
39. CDC14B ENSGALG00000012627 110 0.9 - - 0.900 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
40. OSGIN2 ENSGALG00000042840 83 0.9 - - 0.900 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
41. MRC2 ENSGALG00000000461 48 0.9 - - 0.900 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
42. CLEC16A ENSGALG00000007167 66 0.9 - - 0.900 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
43. ITGB4 ENSGALG00000002389 44 0.9 - - 0.900 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
44. TDRD6 48 0.9 - - 0.900 - - - - - - - tudor domain containing 6
45. L3MBTL3 ENSGALG00000034030 113 0.899 - - 0.899 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
46. U4 U4 69 0.899 - - 0.899 - - - - - - -
47. ENSGALG00000028964 ENSGALG00000028964 46 0.899 - - 0.899 - - - - - - -
48. SETD1B ENSGALG00000004324 2897 0.899 - - 0.899 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
49. TRAF3IP1 ENSGALG00000004236 7094 0.899 - - 0.899 - - - - - - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
50. DBN1 ENSGALG00000033405 216 0.899 - - 0.899 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
51. SLC3A1 ENSGALG00000009973 608 0.899 - - 0.899 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
52. MED12 ENSGALG00000036322 814 0.899 - - 0.899 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
53. RQCD1 RQCD1 110 0.899 - - 0.899 - - - - - - -
54. FBXL5 ENSGALG00000014510 245 0.898 - - 0.898 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
55. GFER ENSGALG00000005579 1367 0.898 - - 0.898 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
56. AKAP10 ENSGALG00000004679 103 0.897 - - 0.897 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
57. UEVLD ENSGALG00000006342 164 0.897 - - 0.897 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
58. TRIM13 ENSGALG00000017011 92 0.897 - - 0.897 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
59. F2R ENSGALG00000014983 106 0.896 - - 0.896 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
60. LRRC42 ENSGALG00000010743 384 0.895 - - 0.895 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
61. ENSGALG00000002020 ENSGALG00000002020 183 0.895 - - 0.895 - - - - - - -
62. SZT2 ENSGALG00000028561 255 0.895 - - 0.895 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
63. ENSGALG00000020103 ENSGALG00000020103 64 0.894 - - 0.894 - - - - - - -
64. SENP6 ENSGALG00000015901 8013 0.894 - - 0.894 - - - - - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
65. ENSGALG00000004703 ENSGALG00000004703 112 0.894 - - 0.894 - - - - - - -
66. ABCC3 ENSGALG00000007522 340 0.894 - - 0.894 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
67. KCTD3 ENSGALG00000009678 335 0.894 - - 0.894 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
68. NXPE3 ENSGALG00000015344 111 0.893 - - 0.893 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
69. GGT7 ENSGALG00000001062 476 0.893 - - 0.893 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
70. TCTN2 ENSGALG00000023683 3596 0.892 - - 0.892 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
71. APTX ENSGALG00000001954 692 0.892 - - 0.892 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
72. PTDSS2 ENSGALG00000004300 682 0.891 - - 0.891 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
73. GCC2 ENSGALG00000016806 1085 0.89 - - 0.890 - - - - - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
74. RAD54L2 ENSGALG00000003243 187 0.889 - - 0.889 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
75. RPS6KB1 ENSGALG00000005198 169 0.888 - - 0.888 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
76. TTPAL ENSGALG00000004244 2734 0.888 - - 0.888 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
77. CHAMP1 ENSGALG00000016813 508 0.888 - - 0.888 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
78. CDC5L ENSGALG00000016704 22893 0.888 - - 0.888 - - - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
79. CA9 ENSGALG00000021340 1431 0.886 - - 0.886 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
80. NGF ENSGALG00000002556 122 0.886 - - 0.886 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
81. ITM2B ENSGALG00000016996 1112 0.886 - - 0.886 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
82. BBS5 ENSGALG00000009846 344 0.885 - - 0.885 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
83. ATP8B4 ENSGALG00000002326 456 0.885 - - 0.885 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
84. STRBP ENSGALG00000029927 3516 0.884 - - 0.884 - - - - - - - spermatid perinuclear RNA binding protein [Source:NCBI gene;Acc:417105]
85. CDCA7L ENSGALG00000035978 2112 0.884 - - 0.884 - - - - - - - cell division cycle associated 7 like [Source:NCBI gene;Acc:420608]
86. PRUNE PRUNE 452 0.884 - - 0.884 - - - - - - -
87. WAPAL WAPAL 625 0.883 - - 0.883 - - - - - - -
88. MED15 ENSGALG00000006430 814 0.883 - - 0.883 - - - - - - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]
89. EMP1 ENSGALG00000011803 351 0.883 - - 0.883 - - - - - - - epithelial membrane protein 1 [Source:NCBI gene;Acc:417964]
90. C18orf8 C18orf8 1512 0.883 - - 0.883 - - - - - - -
91. IFT81 ENSGALG00000003854 2534 0.882 - - 0.882 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
92. AAMP ENSGALG00000011445 2528 0.881 - - 0.881 - - - - - - - angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
93. MLLT3 ENSGALG00000015078 502 0.881 - - 0.881 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
94. PRPF40A ENSGALG00000012526 7724 0.88 - - 0.880 - - - - - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
95. CENPO ENSGALG00000016609 1699 0.88 - - 0.880 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
96. DCP1B 1306 0.88 - - 0.880 - - - - - - - decapping mRNA 1B
97. ENSGALG00000008689 ENSGALG00000008689 232 0.879 - - 0.879 - - - - - - -
98. N4BP2L2 857 0.879 - - 0.879 - - - - - - - NEDD4 binding protein 2 like 2, transcript variant X7
99. REST 2394 0.879 - - 0.879 - - - - - - - RE1 silencing transcription factor
100. AKT3 ENSGALG00000034081 866 0.878 - - 0.878 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]

There are 440 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA