Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TOP1MT

Gene Name Gene ID Reads Annotation
TOP1MT ENSGALG00000029572 1165 DNA topoisomerase I mitochondrial [Source:NCBI gene;Acc:408025]











Genes with expression patterns similar to TOP1MT

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TOP1MT ENSGALG00000029572 1165 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA topoisomerase I mitochondrial [Source:NCBI gene;Acc:408025]
2. HEATR3 ENSGALG00000041613 2704 0.79 - - - - - - 0.790 - - - HEAT repeat containing 3 [Source:NCBI gene;Acc:415734]
3. NUPL2 ENSGALG00000010942 2442 0.779 - - - - - - - 0.779 - - nucleoporin like 2 [Source:NCBI gene;Acc:420614]
4. N4BP2 ENSGALG00000014281 3144 0.774 - - - - - - 0.774 - - - NEDD4 binding protein 2, transcript variant X6
5. MTF1 ENSGALG00000001639 1453 0.769 - - - - - - - 0.769 - - metal regulatory transcription factor 1 [Source:NCBI gene;Acc:428218]
6. PHF20L1 ENSGALG00000033205 7598 0.759 - - - - - - 0.759 - - - PHD finger protein 20 like 1 [Source:NCBI gene;Acc:420323]
7. THUMPD2 ENSGALG00000009119 1783 0.748 - - - - - - 0.748 - - - THUMP domain containing 2 [Source:HGNC Symbol;Acc:HGNC:14890]
8. SDR42E1 ENSGALG00000005456 586 0.745 - - - - - - - 0.745 - - short chain dehydrogenase/reductase family 42E, member 1 [Source:HGNC Symbol;Acc:HGNC:29834]
9. LIPA ENSGALG00000006378 4414 0.743 - - - - - - 0.743 - - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
10. ZC3H3 ENSGALG00000043265 1638 0.743 - - - - - - 0.743 - - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
11. SENP6 ENSGALG00000015901 8013 0.743 - - - - - - 0.743 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
12. ESD ENSGALG00000016991 11289 0.74 - - - - - - 0.740 - - - esterase D [Source:NCBI gene;Acc:418856]
13. SLC35E1 ENSGALG00000003794 2563 0.738 - - - - - - - - 0.738 - solute carrier family 35 member E1 [Source:HGNC Symbol;Acc:HGNC:20803]
14. FAM133B 9239 0.736 - - - - - - - 0.736 - - family with sequence similarity 133 member B
15. CCNE1 ENSGALG00000004494 4945 0.735 - - - - - - - 0.735 - - cyclin E1 [Source:NCBI gene;Acc:426117]
16. SPTSSA ENSGALG00000025755 3361 0.735 - - - - - - - 0.735 - - serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
17. NUDT14 ENSGALG00000028940 3795 0.734 - - - - - - 0.734 - - - nudix hydrolase 14 [Source:NCBI gene;Acc:423501]
18. ZDHHC17 ENSGALG00000010253 2588 0.733 - - - - - - 0.733 - - - zinc finger DHHC-type containing 17 [Source:NCBI gene;Acc:417867]
19. TMED2 ENSGALG00000003307 20704 0.732 - - - - - - 0.732 - - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
20. PTPRJ ENSGALG00000006382 891 0.732 - - - - - - 0.732 - - - protein tyrosine phosphatase, receptor type J [Source:NCBI gene;Acc:395330]
21. PTPRG ENSGALG00000007177 2341 0.731 - - - - - - 0.731 - - - protein tyrosine phosphatase, receptor type G [Source:NCBI gene;Acc:374208]
22. CLCC1 ENSGALG00000002106 1662 0.731 - - - - - - 0.731 - - - chloride channel CLIC like 1 [Source:HGNC Symbol;Acc:HGNC:29675]
23. MAST4 ENSGALG00000014784 4153 0.728 - - - - - - - 0.728 - - microtubule associated serine/threonine kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:19037]
24. RGS7BP ENSGALG00000027389 1414 0.727 - - - - - - 0.727 - - - regulator of G protein signaling 7 binding protein [Source:HGNC Symbol;Acc:HGNC:23271]
25. SNN ENSGALG00000028876 1687 0.726 - - - - - - - 0.726 - - stannin [Source:NCBI gene;Acc:416429]
26. NCOR1 ENSGALG00000004477 4534 0.726 - - - - - - - 0.726 - - nuclear receptor corepressor 1 [Source:HGNC Symbol;Acc:HGNC:7672]
27. TMEM26 ENSGALG00000025862 2222 0.724 - - - - - - - - 0.724 - transmembrane protein 26 [Source:NCBI gene;Acc:423663]
28. RIOK2 ENSGALG00000015288 6280 0.723 - - - - - - - 0.723 - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
29. MCPH1 ENSGALG00000016332 2097 0.722 - - - - - - 0.722 - - - microcephalin 1 [Source:NCBI gene;Acc:100125976]
30. TULP3 ENSGALG00000013424 2064 0.721 - - - - - - 0.721 - - - tubby like protein 3 [Source:HGNC Symbol;Acc:HGNC:12425]
31. GRPEL1 ENSGALG00000015549 11246 0.72 - - - - - - 0.720 - - - GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
32. RBM45 ENSGALG00000009202 6057 0.72 - - - - - - - 0.720 - - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
33. TSPAN5 ENSGALG00000012227 8703 0.72 - - - - - - 0.720 - - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
34. EPHA5 ENSGALG00000011680 906 0.719 - - - - - - 0.719 - - - EPH receptor A5 [Source:NCBI gene;Acc:395997]
35. PUS1 ENSGALG00000002354 10153 0.717 - - - - - - - 0.717 - - pseudouridylate synthase 1 [Source:HGNC Symbol;Acc:HGNC:15508]
36. ASNSD1 ENSGALG00000041666 3757 0.716 - - - - - - 0.716 - - - asparagine synthetase domain containing 1 [Source:NCBI gene;Acc:423983]
37. SETD9 ENSGALG00000014719 5081 0.715 - - - - - - 0.715 - - - SET domain containing 9, transcript variant X2
38. PPP1R21 ENSGALG00000008937 2343 0.714 - - - - - - 0.714 - - - protein phosphatase 1 regulatory subunit 21 [Source:NCBI gene;Acc:421287]
39. THAP5 ENSGALG00000009494 6540 0.714 - - - - - - 0.714 - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
40. LY6E ENSGALG00000041621 16227 0.713 - - - - - - 0.713 - - - lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
41. TAF2 ENSGALG00000043193 6311 0.711 - - - - - - 0.711 - - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
42. NDUFA12 ENSGALG00000011325 19807 0.708 - - - - - - - 0.708 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
43. LSM6 ENSGALG00000009985 18582 0.706 - - - - - - 0.706 - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
44. ABL ABL 9532 0.706 - - - - - - 0.706 - - -
45. ENSGALG00000026041 ENSGALG00000026041 13390 0.706 - - - - - - - 0.706 - -
46. MED21 ENSGALG00000027435 5766 0.703 - - - - - - 0.703 - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
47. E2F5 ENSGALG00000038915 3562 0.702 - - - - - - - 0.702 - - E2F transcription factor 5 [Source:NCBI gene;Acc:420206]
48. HCN2 ENSGALG00000001342 7506 0.702 - - - - - - - 0.702 - - hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 [Source:HGNC Symbol;Acc:HGNC:4846]
49. CSNK1E ENSGALG00000032257 2165 0.701 - - - - - - 0.701 - - - casein kinase 1 epsilon [Source:NCBI gene;Acc:378891]
50. USP45 ENSGALG00000015478 3101 0.701 - - - - - - 0.701 - - - ubiquitin specific peptidase 45 [Source:NCBI gene;Acc:421793]
51. EXOC2 ENSGALG00000012837 4914 0.701 - - - - - - - 0.701 - - exocyst complex component 2 [Source:NCBI gene;Acc:420889]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA