Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TOP1

Gene Name Gene ID Reads Annotation
TOP1 ENSGALG00000003681 30214 DNA topoisomerase I [Source:NCBI gene;Acc:396004]











Genes with expression patterns similar to TOP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TOP1 ENSGALG00000003681 30214 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA topoisomerase I [Source:NCBI gene;Acc:396004]
2. MRPS33 ENSGALG00000028879 17966 1.688 - - - - - - 0.874 0.814 - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
3. ITM2A ENSGALG00000004107 29262 1.671 - - - - 0.788 - 0.883 - - - integral membrane protein 2A [Source:NCBI gene;Acc:422145]
4. CHD4 ENSGALG00000013565 25695 1.638 - - - - 0.811 - 0.827 - - - chromodomain helicase DNA binding protein 4
5. ATP5H 53898 1.609 - - - - 0.741 - 0.868 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit D, transcript variant X2
6. TBP ENSGALG00000011171 5759 1.601 - - - - 0.853 - 0.748 - - - TATA-box binding protein [Source:NCBI gene;Acc:395995]
7. HMGN1 ENSGALG00000016067 17375 1.56 - - - - 0.792 - - 0.768 - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
8. EXOSC2 ENSGALG00000040373 24275 1.558 - - - - 0.812 - 0.746 - - - exosome component 2 [Source:NCBI gene;Acc:417182]
9. ILF2 ENSGALG00000011570 23050 1.521 - - - - 0.809 - 0.712 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
10. PPP1R7 ENSGALG00000031766 22187 1.518 - - - - 0.812 - - 0.706 - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
11. COPB1 ENSGALG00000006015 16518 0.922 - - - - - - 0.922 - - - coatomer protein complex subunit beta 1 [Source:NCBI gene;Acc:423063]
12. RSU1 ENSGALG00000040891 12561 0.919 - - - - - - 0.919 - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
13. PDCD5 ENSGALG00000004648 22576 0.916 - - - - - - 0.916 - - - programmed cell death 5 [Source:NCBI gene;Acc:415765]
14. TMED5 27507 0.912 - - - - - - 0.912 - - - transmembrane p24 trafficking protein 5
15. COX5A ENSGALG00000014121 55281 0.904 - - - - - - 0.904 - - - cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
16. ARL5B ENSGALG00000008557 12887 0.892 - - - - - - 0.892 - - - ADP ribosylation factor like GTPase 5B [Source:NCBI gene;Acc:420513]
17. TBCA ENSGALG00000004353 18510 0.884 - - - - - - 0.884 - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
18. OLA1 ENSGALG00000009325 26414 0.88 - - - - - - 0.880 - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
19. PPP4R2 ENSGALG00000007810 15127 0.878 - - - - - - 0.878 - - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
20. ARHGDIB ENSGALG00000011738 39492 0.877 - - - - - - 0.877 - - - Rho GDP dissociation inhibitor beta [Source:NCBI gene;Acc:417941]
21. THOC7 ENSGALG00000007299 38227 0.875 - - - - - - 0.875 - - - THO complex 7 [Source:NCBI gene;Acc:416077]
22. ENSGALG00000000508 ENSGALG00000000508 19203 0.874 - - - - - - 0.874 - - -
23. FASN ENSGALG00000040896 17372 0.864 - - - - 0.864 - - - - - fatty acid synthase [Source:NCBI gene;Acc:396061]
24. SEC31A ENSGALG00000040484 20190 0.863 - - - - - - 0.863 - - - SEC31 homolog A, COPII coat complex component [Source:NCBI gene;Acc:422597]
25. PAIP2 11856 0.86 - - - - - - 0.860 - - - poly(A) binding protein interacting protein 2, transcript variant X1
26. TPMT ENSGALG00000012687 9537 0.859 - - - - 0.859 - - - - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]
27. NUPL1 NUPL1 8197 0.859 - - - - 0.859 - - - - -
28. ENSGALG00000007096 ENSGALG00000007096 14595 0.858 - - - - - - 0.858 - - -
29. SKA2 ENSGALG00000005090 24296 0.857 - - - - - - 0.857 - - - spindle and kinetochore associated complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28006]
30. RUVBL1 ENSGALG00000005931 9379 0.855 - - - - 0.855 - - - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
31. BCAS2 ENSGALG00000002002 22536 0.85 - - - - - - 0.850 - - - breast carcinoma amplified sequence 2 [Source:NCBI gene;Acc:419884]
32. PRPS1 ENSGALG00000004908 27994 0.849 - - - - 0.849 - - - - - phosphoribosyl pyrophosphate synthetase 1
33. CASP3 ENSGALG00000010638 11572 0.849 - - - - 0.849 - - - - - caspase 3 [Source:NCBI gene;Acc:395476]
34. EPRS ENSGALG00000009598 26412 0.848 - - - - - - 0.848 - - - glutamyl-prolyl-tRNA synthetase [Source:NCBI gene;Acc:421348]
35. RPL22L1 ENSGALG00000009312 59030 0.846 - - - - - - 0.846 - - - ribosomal protein L22 like 1 [Source:NCBI gene;Acc:100858296]
36. FAM72A ENSGALG00000000791 17723 0.846 - - - - 0.846 - - - - - family with sequence similarity 72 member A, transcript variant X1
37. EMC3 ENSGALG00000003738 10363 0.845 - - - - - - 0.845 - - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
38. VIMENTIN VIMENTIN 33105 0.843 - - - - 0.843 - - - - -
39. MSH2 ENSGALG00000008962 9709 0.84 - - - - 0.840 - - - - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
40. DYNLT1 ENSGALG00000019979 38176 0.835 - - - - - - 0.835 - - - dynein light chain Tctex-type 1 [Source:HGNC Symbol;Acc:HGNC:11697]
41. MESDC2 MESDC2 11010 0.835 - - - - - - 0.835 - - -
42. RBF RBF 49711 0.833 - - - - - - 0.833 - - -
43. NDUFB6 ENSGALG00000002033 45494 0.833 - - - - - - 0.833 - - - NADH:ubiquinone oxidoreductase subunit B6 [Source:NCBI gene;Acc:416391]
44. NLK ENSGALG00000005699 9066 0.832 - - - - - - 0.832 - - - nemo like kinase [Source:HGNC Symbol;Acc:HGNC:29858]
45. SUB1 ENSGALG00000003248 56412 0.832 - - - - 0.832 - - - - - SUB1 homolog, transcriptional regulator [Source:NCBI gene;Acc:427425]
46. NDUFA4 ENSGALG00000025999 53323 0.83 - - - - 0.830 - - - - - NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
47. ACAD9 ENSGALG00000005034 22100 0.83 - - - - - - 0.830 - - - acyl-CoA dehydrogenase family member 9 [Source:NCBI gene;Acc:415974]
48. COX7A2 ENSGALG00000015906 62347 0.829 - - - - - - 0.829 - - - cytochrome c oxidase subunit 7A2 [Source:NCBI gene;Acc:772260]
49. ABCF2 ENSGALG00000034573 15639 0.828 - - - - - - 0.828 - - - ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
50. APPBP2 ENSGALG00000005314 6447 0.827 - - - - 0.827 - - - - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
51. ENSGALG00000028938 ENSGALG00000028938 18616 0.827 - - - - - - 0.827 - - -
52. UBE2E3 ENSGALG00000020793 9517 0.824 - - - - 0.824 - - - - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
53. ADH5 ENSGALG00000012245 38217 0.823 - - - - 0.823 - - - - - alcohol dehydrogenase 5 (class III), chi polypeptide [Source:NCBI gene;Acc:422705]
54. SEC22B ENSGALG00000039704 16080 0.823 - - - - 0.823 - - - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
55. MRPL3 ENSGALG00000040873 21053 0.823 - - - - 0.823 - - - - - mitochondrial ribosomal protein L3 [Source:NCBI gene;Acc:420686]
56. PHB ENSGALG00000038604 21632 0.823 - - - - 0.823 - - - - - prohibitin [Source:NCBI gene;Acc:419980]
57. HAT1 ENSGALG00000009525 24864 0.822 - - - - - - 0.822 - - - histone acetyltransferase 1 [Source:NCBI gene;Acc:374037]
58. ACP1 ENSGALG00000016363 10636 0.821 - - - - - - 0.821 - - - acid phosphatase 1 [Source:NCBI gene;Acc:421909]
59. C1H21ORF33 ENSGALG00000019171 8910 0.82 - - - - 0.820 - - - - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
60. CKAP2 ENSGALG00000017025 25020 0.82 - - - - 0.820 - - - - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
61. AIMP1 ENSGALG00000010553 17994 0.819 - - - - 0.819 - - - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
62. NUDC ENSGALG00000000895 17844 0.818 - - - - - - 0.818 - - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
63. EXOC7 ENSGALG00000002050 9612 0.818 - - - - - - 0.818 - - - exocyst complex component 7 [Source:NCBI gene;Acc:417361]
64. VCP ENSGALG00000001986 23679 0.817 - - - - - - 0.817 - - - valosin containing protein [Source:NCBI gene;Acc:427410]
65. NOLC1 ENSGALG00000041124 12765 0.817 - - - - 0.817 - - - - - nucleolar and coiled-body phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:15608]
66. CSNK2A1 ENSGALG00000006197 41409 0.816 - - - - - - 0.816 - - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
67. FH ENSGALG00000013165 13669 0.816 - - - - - - 0.816 - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
68. AP1M1 ENSGALG00000003959 31761 0.814 - - - - 0.814 - - - - - adaptor related protein complex 1 subunit mu 1 [Source:NCBI gene;Acc:420149]
69. METAP2 ENSGALG00000011377 16311 0.814 - - - - 0.814 - - - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
70. ALDH4A1 ENSGALG00000042184 9432 0.812 - - - - 0.812 - - - - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
71. TRAPPC6B ENSGALG00000010157 7567 0.811 - - - - 0.811 - - - - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
72. CRHOB CRHOB 27139 0.81 - - - - - - 0.810 - - -
73. THUMPD3 ENSGALG00000008394 17711 0.809 - - - - 0.809 - - - - - THUMP domain containing 3, transcript variant X2
74. TMEM184C ENSGALG00000010019 7856 0.809 - - - - 0.809 - - - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
75. EXOSC3 ENSGALG00000002426 7255 0.809 - - - - 0.809 - - - - - exosome component 3 [Source:NCBI gene;Acc:423626]
76. PPIH ENSGALG00000004874 25558 0.809 - - - - 0.809 - - - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
77. NDUFA10 ENSGALG00000004302 41948 0.809 - - - - 0.809 - - - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:NCBI gene;Acc:424032]
78. PPA2 ENSGALG00000010582 22301 0.809 - - - - 0.809 - - - - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
79. FAM168B ENSGALG00000002172 12162 0.809 - - - - - - 0.809 - - - family with sequence similarity 168 member B [Source:HGNC Symbol;Acc:HGNC:27016]
80. CCNB2 ENSGALG00000004161 50324 0.806 - - - - 0.806 - - - - - cyclin B2 [Source:NCBI gene;Acc:415400]
81. C19orf70 ENSGALG00000026847 19315 0.806 - - - - 0.806 - - - - - chromosome 19 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33702]
82. COPG COPG 6949 0.805 - - - - 0.805 - - - - -
83. SCAMP5 ENSGALG00000014116 8877 0.805 - - - - 0.805 - - - - - secretory carrier membrane protein 5 [Source:HGNC Symbol;Acc:HGNC:30386]
84. SERINC1 ENSGALG00000014868 12484 0.804 - - - - 0.804 - - - - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
85. SFPQ ENSGALG00000002514 66832 0.803 - - - - - - 0.803 - - - splicing factor proline and glutamine rich [Source:HGNC Symbol;Acc:HGNC:10774]
86. PELI1 ENSGALG00000008837 11561 0.803 - - - - 0.803 - - - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
87. PDHB ENSGALG00000029576 12254 0.802 - - - - 0.802 - - - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
88. ATP5J 14451 0.802 - - - - 0.802 - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
89. NUP188 ENSGALG00000043394 9288 0.802 - - - - 0.802 - - - - - nucleoporin 188 [Source:NCBI gene;Acc:417198]
90. PCBP4 ENSGALG00000027695 7937 0.802 - - - - - - 0.802 - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
91. ENSGALG00000007509 ENSGALG00000007509 18441 0.801 - - - - 0.801 - - - - -
92. CCDC58 ENSGALG00000014413 9022 0.801 - - - - 0.801 - - - - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
93. GLRX5 ENSGALG00000011079 28943 0.8 - - - - 0.800 - - - - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]
94. CYB5R2 ENSGALG00000032372 7967 0.799 - - - - 0.799 - - - - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
95. NDUFB5 ENSGALG00000009076 32963 0.799 - - - - 0.799 - - - - - NADH:ubiquinone oxidoreductase subunit B5 [Source:NCBI gene;Acc:424978]
96. ZZZ3 ENSGALG00000008988 3132 0.797 - - - - 0.797 - - - - - zinc finger ZZ-type containing 3, transcript variant X5
97. GTF2B ENSGALG00000006205 6950 0.796 - - - - 0.796 - - - - - general transcription factor IIB [Source:HGNC Symbol;Acc:HGNC:4648]
98. MICALL1 ENSGALG00000012265 3753 0.796 - - - - 0.796 - - - - - MICAL like 1 [Source:NCBI gene;Acc:418032]
99. TCEA2 ENSGALG00000005976 9143 0.795 - - - - 0.795 - - - - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
100. COG6 ENSGALG00000017035 2777 0.795 - - - - 0.795 - - - - - component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]

There are 197 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA