Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TOP1

Gene Name Gene ID Reads Annotation
TOP1 ENSDARG00000086775 48 DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]










Genes with expression patterns similar to TOP1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. TOP1 ENSDARG00000086775 48 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
2. rbfox3l rbfox3l 34 2.324 - 0.758 - 0.707 0.859 - - - -
3. lef1 ENSDARG00000031894 492 2.312 - 0.754 - - - 0.772 0.786 - - lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]
4. si:ch211-162i8.6 si:ch211-162i8.6 15 1.822 - - - - - 0.870 - - 0.952
5. CABZ01073740.1 CABZ01073740.1 27 1.802 - - - - 0.906 0.896 - - -
6. allc ENSDARG00000042562 12 1.771 - - - - 0.948 - - 0.823 - allantoicase [Source:ZFIN;Acc:ZDB-GENE-040718-471]
7. C6H21orf58 C6H21orf58 14 1.758 - - - - - - - 0.823 0.935
8. htr3a ENSDARG00000089212 51 1.758 - 0.758 - - 1.000 - - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
9. myo10l3 ENSDARG00000074143 49 1.758 - 0.862 - - - 0.896 - - - myosin X-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-237]
10. si:dkey-150k17.3 33 1.719 - - - - 0.834 0.885 - - - si:dkey-150k17.3
11. BX469915.2 BX469915.2 48 1.654 - 0.758 - - - 0.896 - - -
12. lrrc4bb ENSDARG00000014792 47 1.645 - 0.847 0.798 - - - - - - leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]
13. TRIM14_2 TRIM14_2 15 1.628 - 0.806 - - - 0.822 - - -
14. zgc:66350 zgc:66350 122 1.628 - - - - - 0.875 0.753 - -
15. zgc:171452 ENSDARG00000074069 6 1.608 - - - - - 0.896 0.712 - - zgc:171452 [Source:ZFIN;Acc:ZDB-GENE-071004-84]
16. si:ch73-103l1.2 ENSDARG00000096505 17 1.608 - - - - - 0.896 0.712 - - si:ch73-103l1.2 [Source:ZFIN;Acc:ZDB-GENE-121214-226]
17. nceh1b nceh1b 22 1.605 - - - - 0.709 0.896 - - -
18. myo18ab ENSDARG00000061862 124 1.6 0.785 0.815 - - - - - - - myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
19. klf5b ENSDARG00000062106 7 1.59 - 0.758 - - 0.832 - - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
20. si:rp71-20i5.5 si:rp71-20i5.5 9 1.583 0.715 - - - - - - - 0.868
21. ksr2 ENSDARG00000094526 134 1.583 - 0.861 0.722 - - - - - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
22. si:ch211-240g9.1 36 1.581 - 0.795 - - - - - - 0.786 si:ch211-240g9.1
23. baiap2l1b ENSDARG00000031119 71 1.57 - 0.758 - - - 0.812 - - - BAI1-associated protein 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-050417-371]
24. tap1 ENSDARG00000079766 75 1.555 - 0.758 - - 0.797 - - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:ZFIN;Acc:ZDB-GENE-050517-43]
25. card9 ENSDARG00000067672 33 1.551 - - - - - 0.802 0.749 - - caspase recruitment domain family, member 9 [Source:ZFIN;Acc:ZDB-GENE-060531-94]
26. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1.548 - 0.758 - - - 0.790 - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
27. kdm6al ENSDARG00000059794 545 1.543 - - - - - 0.785 0.758 - - lysine (K)-specific demethylase 6A, like [Source:ZFIN;Acc:ZDB-GENE-070112-2002]
28. cacna1ab ENSDARG00000006923 12 1.541 - 0.758 - - 0.783 - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-3]
29. zgc:66313 ENSDARG00000030357 45 1.541 - - - - - - 0.712 - 0.829 zgc:66313 [Source:ZFIN;Acc:ZDB-GENE-040426-1606]
30. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1.535 - - - - - - 0.712 0.823 - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
31. klc3 ENSDARG00000055965 116 1.526 0.754 0.772 - - - - - - - kinesin light chain 3 [Source:ZFIN;Acc:ZDB-GENE-060929-772]
32. si:ch211-286b5.9 ENSDARG00000086166 27 1.508 - 0.758 0.750 - - - - - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
33. syt9b ENSDARG00000029239 31 1.499 - 0.758 - - - - 0.741 - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
34. INTU ENSDARG00000077639 158 1.498 - 0.758 - - - 0.740 - - - inturned planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-110914-91]
35. tmigd1 ENSDARG00000007040 19 1.491 - 0.758 - - - - 0.733 - - transmembrane and immunoglobulin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080303-6]
36. CR391998.1 ENSDARG00000091817 15 1.47 - 0.758 - - - - 0.712 - - putative protein TPRXL [Source:NCBI gene;Acc:101882255]
37. CABZ01041769.1 CABZ01041769.1 17 1.47 - 0.758 - - - - 0.712 - -
38. CABZ01058863.1 CABZ01058863.1 28 1.461 0.715 - - - - - 0.746 - -
39. faima ENSDARG00000005828 154 1.458 - 0.745 - - - 0.713 - - - Fas apoptotic inhibitory molecule a [Source:ZFIN;Acc:ZDB-GENE-040718-323]
40. acy1 ENSDARG00000038475, ENSDARG00000111129 576 1.449 - - - - - 0.746 0.703 - - aminoacylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-755]
41. zgc:165539 ENSDARG00000027639 20 1.447 - - - - 0.735 - 0.712 - - zgc:165539 [Source:ZFIN;Acc:ZDB-GENE-030131-5478]
42. adcy1b ENSDARG00000088634 44 1 - - - - 1.000 - - - - adenylate cyclase 1b [Source:ZFIN;Acc:ZDB-GENE-100805-1]
43. prkacbb ENSDARG00000059125 7 1 - - - - 1.000 - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
44. zgc:158417 ENSDARG00000101671 46 1 - - - - 1.000 - - - - zgc:158417 [Source:ZFIN;Acc:ZDB-GENE-061201-36]
45. PLCXD1_2 PLCXD1_2 9 1 - - - - 1.000 - - - -
46. irgf1 ENSDARG00000070774 7 0.983 - - - - - - - - 0.983 immunity-related GTPase family, f1 [Source:ZFIN;Acc:ZDB-GENE-051212-5]
47. esyt1a ENSDARG00000034714 129 0.96 - - - - - 0.960 - - - extended synaptotagmin-like protein 1a [Source:ZFIN;Acc:ZDB-GENE-090311-55]
48. GRIN3B GRIN3B 16 0.954 - - - - - - - - 0.954
49. dkk3b ENSDARG00000070683 209 0.954 - - - - - 0.954 - - - dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
50. TMEM121 TMEM121 4 0.954 - - - - - - - - 0.954
51. ZNF70_4 ZNF70_4 2 0.952 - - - - - - - - 0.952
52. COL21A1 ENSDARG00000025320 6 0.952 - - - - - - - - 0.952 collagen, type XXI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-110607-3]
53. si:ch73-6k14.2 ENSDARG00000096031 16 0.952 - - - - - - - - 0.952 si:ch73-6k14.2 [Source:ZFIN;Acc:ZDB-GENE-110914-243]
54. rxfp3.2a 11 0.952 - - - - - - - - 0.952 relaxin/insulin-like family peptide receptor 3.2a
55. ros1 ENSDARG00000087197 9 0.952 - - - - - - - - 0.952 c-ros oncogene 1 , receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020506-1]
56. CT573253.1 CT573253.1 4 0.952 - - - - - - - - 0.952
57. si:ch73-132k15.2 ENSDARG00000095867 5 0.952 - - - - - - - - 0.952 si:ch73-132k15.2 [Source:ZFIN;Acc:ZDB-GENE-110411-191]
58. CU469509.2 CU469509.2 4 0.952 - - - - - - - - 0.952
59. C7H15orf43 C7H15orf43 10 0.952 - - - - - - - - 0.952
60. PGBD4_5 PGBD4_5 16 0.952 - - - - - - - - 0.952
61. si:ch211-260m19.8 si:ch211-260m19.8 33 0.952 - - - - - - - - 0.952
62. bicd1a ENSDARG00000079496 2 0.952 - - - - - - - - 0.952 bicaudal D homolog 1a [Source:ZFIN;Acc:ZDB-GENE-081031-9]
63. Telomerase-vert Telomerase-vert 8 0.952 - - - - - - - - 0.952
64. si:ch211-271e10.1 ENSDARG00000095735 15 0.952 - - - - - - - - 0.952 si:ch211-271e10.1 [Source:ZFIN;Acc:ZDB-GENE-060526-145]
65. 5S_rRNA_31 5S_rRNA_31 3 0.952 - - - - - - - - 0.952
66. si:dkey-47k20.1 ENSDARG00000092523 2 0.952 - - - - - - - - 0.952 si:dkey-47k20.1 [Source:ZFIN;Acc:ZDB-GENE-060503-641]
67. si:ch211-93g23.2 ENSDARG00000070558 105 0.952 - - - - - - - - 0.952 si:ch211-93g23.2 [Source:ZFIN;Acc:ZDB-GENE-090312-164]
68. TRIM14_14 TRIM14_14 2 0.952 - - - - - - - - 0.952
69. si:ch211-261n9.2 si:ch211-261n9.2 4 0.952 - - - - - - - - 0.952
70. ninj2 ENSDARG00000079824 1 0.948 - - - - 0.948 - - - - ninjurin 2 [Source:ZFIN;Acc:ZDB-GENE-100422-19]
71. zgc:165453 ENSDARG00000078183 3 0.948 - - - - 0.948 - - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
72. CABZ01117519.1 CABZ01117519.1 1 0.948 - - - - 0.948 - - - -
73. pdgfb pdgfb 5 0.948 - - - - 0.948 - - - -
74. atf1 ENSDARG00000044301, ENSDARG00000109865 2 0.948 - - - - 0.948 - - - - activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
75. si:ch211-53m15.2 ENSDARG00000094928 1 0.948 - - - - 0.948 - - - - si:ch211-53m15.2 [Source:ZFIN;Acc:ZDB-GENE-100922-24]
76. si:dkey-46d17.4 si:dkey-46d17.4 1 0.948 - - - - 0.948 - - - -
77. CR848787.1 CR848787.1 2 0.948 - - - - 0.948 - - - -
78. pex11b ENSDARG00000069147 1 0.948 - - - - 0.948 - - - - peroxisomal biogenesis factor 11 beta [Source:ZFIN;Acc:ZDB-GENE-060825-289]
79. MYADM_1 ENSDARG00000086815 1 0.948 - - - - 0.948 - - - - myeloid associated differentiation marker [Source:HGNC Symbol;Acc:HGNC:7544]
80. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 0.948 - - - - 0.948 - - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
81. mbnl3 ENSDARG00000016085 6 0.948 - - - - 0.948 - - - - muscleblind-like splicing regulator 3 [Source:ZFIN;Acc:ZDB-GENE-081002-3]
82. CABZ01055343.1 CABZ01055343.1 12 0.948 - - - - 0.948 - - - -
83. aglb ENSDARG00000100352 22 0.948 - - - - 0.948 - - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b [Source:ZFIN;Acc:ZDB-GENE-050309-54]
84. si:ch211-285c6.4 ENSDARG00000095410 4 0.948 - - - - 0.948 - - - - si:ch211-285c6.4 [Source:ZFIN;Acc:ZDB-GENE-041001-97]
85. pth1b ENSDARG00000091961, ENSDARG00000115353 5 0.948 - - - - 0.948 - - - - parathyroid hormone 1b [Source:ZFIN;Acc:ZDB-GENE-040623-2]
86. CR382283.2 CR382283.2 1 0.948 - - - - 0.948 - - - -
87. tusc3 ENSDARG00000078854 4 0.948 - - - - 0.948 - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
88. zgc:171516 zgc:171516 5 0.948 - - - - 0.948 - - - -
89. cbln10 ENSDARG00000023157 17 0.948 - - - - 0.948 - - - - cerebellin 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4615]
90. THEG ENSDARG00000078644 121 0.948 - - - - 0.948 - - - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
91. uprt ENSDARG00000035549, ENSDARG00000110518 2 0.948 - - - - 0.948 - - - - uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2411]
92. eva1c ENSDARG00000056024 1 0.948 - - - - 0.948 - - - - eva-1 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-091204-329]
93. dyrk1aa ENSDARG00000063570 14 0.948 - - - - 0.948 - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, a [Source:ZFIN;Acc:ZDB-GENE-050302-29]
94. CD97_2 CD97_2 15 0.948 - - - - 0.948 - - - -
95. si:dkey-88j15.4 ENSDARG00000079471 3 0.948 - - - - 0.948 - - - - si:dkey-88j15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-55]
96. ftr19_1 ENSDARG00000094131 1 0.948 - - - - 0.948 - - - - finTRIM family, member 19 [Source:ZFIN;Acc:ZDB-GENE-090506-5]
97. RBBP6_11 RBBP6_11 6 0.948 - - - - 0.948 - - - -
98. iqsec3b ENSDARG00000093091 10 0.948 - - - - 0.948 - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
99. CR385046.7 CR385046.7 1 0.948 - - - - 0.948 - - - -
100. rhobtb2b ENSDARG00000089340 4 0.948 - - - - 0.948 - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]

There are 1302 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA