Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TNRC18

Gene Name Gene ID Reads Annotation
TNRC18 ENSDARG00000077052 1095 trinucleotide repeat containing 18 [Source:ZFIN;Acc:ZDB-GENE-100326-1]










Genes with expression patterns similar to TNRC18

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. TNRC18 ENSDARG00000077052 1095 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 trinucleotide repeat containing 18 [Source:ZFIN;Acc:ZDB-GENE-100326-1]
2. mfhas1 ENSDARG00000079104, ENSDARG00000115162 921 1.864 - - - - - 0.864 1.000 - - malignant fibrous histiocytoma amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-080917-20]
3. dnajc8 ENSDARG00000059373 1858 1.799 - 0.799 - - - - 1.000 - - DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-66]
4. SLC29A4 ENSDARG00000059690 470 1.786 - - - - - 0.786 1.000 - - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
5. CAMK2G CAMK2G 3537 1.786 - - - - - 0.787 0.999 - -
6. fundc2 ENSDARG00000103740 3856 1.742 - - - - - 0.747 0.995 - - fun14 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041010-26]
7. igfbp1a ENSDARG00000099351 1717 1.732 - - - - - 0.732 1.000 - - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
8. USP31 ENSDARG00000074017 628 1.724 - - - - - 0.724 1.000 - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
9. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 1.716 - 0.716 - - - - 1.000 - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
10. zranb2 ENSDARG00000044332 6723 1.714 - 0.716 - - - - 0.998 - - zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
11. si:dkey-13i19.8 ENSDARG00000093058 4617 1.687 - 0.707 - - - - 0.980 - - si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
12. fbxw4 ENSDARG00000033551 645 1.634 0.825 - - - - 0.809 - - - F-box and WD repeat domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-000516-1]
13. fam96b 2255 1.561 - 0.717 - - - 0.844 - - - family with sequence similarity 96, member B
14. flrt3 ENSDARG00000076895 3516 1.527 - 0.748 - - - 0.779 - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
15. BX088524.2 ENSDARG00000103268 564 1.518 - 0.709 - - - 0.809 - - -
16. CR762436.4 CR762436.4 267 1.512 0.716 - - - - 0.796 - - -
17. ccdc6a ENSDARG00000043334, ENSDARG00000112924 1774 1.512 - 0.748 - - - 0.764 - - - coiled-coil domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-7848]
18. phgdh ENSDARG00000001873 8325 1.449 - 0.732 - - - 0.717 - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
19. itm2cb ENSDARG00000039650 716 1.447 - 0.721 - - - 0.726 - - - integral membrane protein 2Cb [Source:ZFIN;Acc:ZDB-GENE-030131-7806]
20. snai1b ENSDARG00000046019 886 1.446 - 0.727 - - - 0.719 - - - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
21. hdgfrp2 7462 1.43 - 0.727 - - - 0.703 - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
22. cramp1l cramp1l 700 1.428 0.711 - - - - - - 0.717 -
23. rnf139 ENSDARG00000036929 494 1.413 - 0.711 - - - 0.702 - - - ring finger protein 139 [Source:ZFIN;Acc:ZDB-GENE-080401-4]
24. echdc2 ENSDARG00000016607 719 1 - - - - - - 1.000 - - enoyl CoA hydratase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030219-147]
25. dkk2 ENSDARG00000076420 553 1 - - - - - - 1.000 - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
26. xpo4 ENSDARG00000010281, ENSDARG00000109463 2010 1 - - - - - - 1.000 - - exportin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3062]
27. etv5a ENSDARG00000069763, ENSDARG00000112509, ENSDARG00000113729 1954 1 - - - - - - 1.000 - - ets variant 5a [Source:ZFIN;Acc:ZDB-GENE-030131-9572]
28. cux2b ENSDARG00000086345 519 1 - - - - - - 1.000 - - cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176]
29. vipr2 ENSDARG00000012353, ENSDARG00000111580, ENSDARG00000115849 485 1 - - - - - - 1.000 - - vasoactive intestinal peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-010406-4]
30. ZNF462 ENSDARG00000112909 1132 1 - - - - - - 1.000 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
31. ARHGAP35 2409 1 - - - - - - 1.000 - - Rho GTPase activating protein 35b, transcript variant X2
32. kif5aa ENSDARG00000098936 2428 1 - - - - - - 1.000 - - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
33. adssl ENSDARG00000012399 2271 1 - - - - - - 1.000 - - adenylosuccinate synthase, like [Source:ZFIN;Acc:ZDB-GENE-020419-28]
34. CABZ01075242.1_1 ENSDARG00000114227 1012 1 - - - - - - 1.000 - -
35. TUBB8P7 TUBB8P7 1353 1 - - - - - - 1.000 - -
36. inpp5e ENSDARG00000103926 567 1 - - - - - - 1.000 - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
37. pigo ENSDARG00000011743 928 1 - - - - - - 1.000 - - phosphatidylinositol glycan anchor biosynthesis, class O [Source:ZFIN;Acc:ZDB-GENE-091204-80]
38. CR388132.2 ENSDARG00000104041 640 1 - - - - - - 1.000 - -
39. lgi2a ENSDARG00000111069 965 1 - - - - - - 1.000 - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
40. arrdc3a ENSDARG00000052690 2280 1 - - - - - - 1.000 - - arrestin domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2913]
41. galnt11 ENSDARG00000063636 1188 1 - - - - - - 1.000 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [Source:ZFIN;Acc:ZDB-GENE-060929-998]
42. CU457815.1 ENSDARG00000115823 1005 1 - - - - - - 1.000 - - ankyrin repeat and SOCS box containing 15a [Source:NCBI gene;Acc:100151067]
43. scg3 ENSDARG00000086288, ENSDARG00000115955 1587 1 - - - - - - 1.000 - - secretogranin III [Source:ZFIN;Acc:ZDB-GENE-040426-1725]
44. zbtb18 ENSDARG00000028228 3653 1 - - - - - - 1.000 - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
45. C20H2orf44 C20H2orf44 486 1 - - - - - - 1.000 - -
46. vamp2 ENSDARG00000056877 2158 0.999 - - - - - - 0.999 - - vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
47. cd276 ENSDARG00000003061 2798 0.999 - - - - - - 0.999 - - CD276 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-452]
48. irx3a ENSDARG00000101076 3106 0.999 - - - - - - 0.999 - - iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]
49. prkacba ENSDARG00000001782 1340 0.999 - - - - - - 0.999 - - protein kinase, cAMP-dependent, catalytic, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1351]
50. mapk6 ENSDARG00000032103 6422 0.999 - - - - - - 0.999 - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
51. pfkma ENSDARG00000014179 1293 0.999 - - - - - - 0.999 - - phosphofructokinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-040912-135]
52. degs1 ENSDARG00000007347 2481 0.999 - - - - - - 0.999 - - delta(4)-desaturase, sphingolipid 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5283]
53. fbl ENSDARG00000053912 5891 0.999 - - - - - - 0.999 - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
54. mtmr14 ENSDARG00000059642 1405 0.999 - - - - - - 0.999 - - myotubularin related protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2649]
55. med6 ENSDARG00000034734 2711 0.999 - - - - - - 0.999 - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
56. rbms1a ENSDARG00000074023 2742 0.999 - - - - - - 0.999 - - RNA binding motif, single stranded interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4967]
57. ctdsp1 ENSDARG00000040674 2828 0.999 - - - - - - 0.999 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
58. GPANK1 ENSDARG00000053995 1535 0.999 - - - - - - 0.999 - - G patch domain and ankyrin repeats 1 [Source:ZFIN;Acc:ZDB-GENE-070928-32]
59. prkag1 ENSDARG00000003818 2800 0.999 - - - - - - 0.999 - - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2188]
60. h1fx ENSDARG00000054058 4075 0.999 - - - - - - 0.999 - - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
61. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 0.999 - - - - - - 0.999 - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
62. SH3BGRL ENSDARG00000058302 4525 0.999 - - - - - - 0.999 - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
63. si:dkey-256i11.1 si:dkey-256i11.1 3373 0.999 - - - - - - 0.999 - -
64. hoxb3a ENSDARG00000029263 5493 0.998 - - - - - - 0.998 - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
65. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 0.998 - - - - - - 0.998 - - slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
66. arf6b ENSDARG00000052928 4585 0.998 - - - - - - 0.998 - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
67. elmo1 ENSDARG00000098753 6966 0.998 - - - - - - 0.998 - - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
68. gys1 ENSDARG00000016875 2037 0.998 - - - - - - 0.998 - - glycogen synthase 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1243]
69. timm13 ENSDARG00000058297 4447 0.998 - - - - - - 0.998 - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
70. mapre1b ENSDARG00000002659 9119 0.998 - - - - - - 0.998 - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
71. nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 0.998 - - - - - - 0.998 - - nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]
72. TNRC6C_1 TNRC6C_1 6574 0.998 - - - - - - 0.998 - -
73. rab7 ENSDARG00000020497, ENSDARG00000109813, ENSDARG00000110814 2627 0.998 - - - - - - 0.998 - - RAB7, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-1352]
74. AP2A1 ENSDARG00000054320 5591 0.998 - - - - - - 0.998 - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
75. snrnp27 ENSDARG00000035625 9080 0.997 - - - - - - 0.997 - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
76. ywhaqa ENSDARG00000042539 7034 0.997 - - - - - - 0.997 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-040122-5]
77. grpel2 ENSDARG00000069421 5673 0.997 - - - - - - 0.997 - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
78. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 0.996 - - - - - - 0.996 - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
79. ppa1b ENSDARG00000030441 9027 0.996 - - - - - - 0.996 - - pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
80. ndufb4 ENSDARG00000019332, ENSDARG00000110786, ENSDARG00000113951 11340 0.996 - - - - - - 0.996 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:ZFIN;Acc:ZDB-GENE-040426-1973]
81. meis1 meis1 6937 0.996 - - - - - - 0.996 - -
82. tob1b ENSDARG00000021372 7048 0.996 - - - - - - 0.996 - - transducer of ERBB2, 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2151]
83. si:ch73-110p20.1 5932 0.996 - - - - - - 0.996 - - si:ch73-110p20.1
84. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 0.996 - - - - - - 0.996 - - GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
85. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 0.995 - - - - - - 0.995 - - ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
86. fubp1 ENSDARG00000029248 15259 0.995 - - - - - - 0.995 - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
87. si:rp71-45k5.4 ENSDARG00000035679 10411 0.994 - - - - - - 0.994 - - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
88. zgc:110339 ENSDARG00000046030 8180 0.994 - - - - - - 0.994 - - zgc:110339 [Source:ZFIN;Acc:ZDB-GENE-050417-323]
89. vamp1 ENSDARG00000031283 3094 0.993 - - - - - - 0.993 - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
90. sept9a ENSDARG00000020235 6881 0.992 - - - - - - 0.992 - - septin 9a [Source:ZFIN;Acc:ZDB-GENE-030131-9187]
91. ctnnb1 ENSDARG00000014571 12004 0.992 - - - - - - 0.992 - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
92. apobec2a ENSDARG00000018881 4790 0.991 - - - - - - 0.991 - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
93. mrpl43 ENSDARG00000076334 4045 0.991 - - - - - - 0.991 - - mitochondrial ribosomal protein L43 [Source:ZFIN;Acc:ZDB-GENE-040718-125]
94. sub1a ENSDARG00000053446 13383 0.99 - - - - - - 0.990 - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
95. edf1 ENSDARG00000009950 10518 0.99 - - - - - - 0.990 - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
96. cct5 ENSDARG00000045399 11572 0.99 - - - - - - 0.990 - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
97. cct2 ENSDARG00000087206, ENSDARG00000104674 19049 0.988 - - - - - - 0.988 - - chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
98. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 0.988 - - - - - - 0.988 - - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
99. dtnba ENSDARG00000077694 5483 0.985 - - - - - - 0.985 - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
100. fuca1 fuca1 6176 0.985 - - - - - - 0.985 - -

There are 1154 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA