Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TNNT3

Gene Name Gene ID Reads Annotation
TNNT3 ENSGALG00000006572 1652 troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]











Genes with expression patterns similar to TNNT3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TNNT3 ENSGALG00000006572 1652 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
2. ACTC1 ENSGALG00000009844 20914 5.078 - 0.886 0.940 0.911 0.772 - - - 0.706 0.863 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
3. gga-mir-7474 ENSGALG00000033766 5727 3.454 - - 0.859 0.846 0.817 - - - - 0.932 gga-mir-7474 [Source:miRBase;Acc:MI0024147]
4. C1QTNF3 ENSGALG00000027887 8646 3.243 0.773 0.800 0.869 0.801 - - - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
5. MYL1 ENSGALG00000002907 1300 3.009 - 0.705 0.817 0.758 - - - - 0.729 - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
6. MYL2_1 ENSGALG00000004582 2367 2.466 0.772 0.835 0.859 - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
7. TNNC2 ENSGALG00000006835 2963 2.464 - 0.896 0.839 0.729 - - - - - - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
8. SH3BGR ENSGALG00000016127 2561 2.42 - - 0.852 0.750 - - - - - 0.818 SH3 domain binding glutamate rich protein
9. TNNI1 ENSGALG00000000313 4069 2.387 - 0.865 0.805 - 0.717 - - - - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
10. TMEM182 ENSGALG00000038936 274 2.377 - - 0.882 0.740 0.755 - - - - - transmembrane protein 182 [Source:HGNC Symbol;Acc:HGNC:26391]
11. NEXN ENSGALG00000008945 1504 2.372 - - 0.889 0.748 - - - - - 0.735 nexilin F-actin binding protein [Source:HGNC Symbol;Acc:HGNC:29557]
12. TPM1 ENSGALG00000003521 11894 2.372 - - 0.779 0.832 - - - - - 0.761 tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]
13. MYL3 ENSGALG00000005448 3379 2.354 - 0.704 0.884 - 0.766 - - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
14. RBM24 ENSGALG00000012712 4138 2.337 - - 0.840 - 0.729 - - - - 0.768 RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
15. AHCY ENSGALG00000033677 35555 2.286 - - 0.794 0.729 - - - - - 0.763 adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
16. PKD2L2 ENSGALG00000006120 592 2.266 - - 0.743 0.737 - - - - - 0.786 polycystin 2 like 2, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9012]
17. MEOX2 ENSGALG00000010794 1556 2.227 - - 0.760 0.732 0.735 - - - - - mesenchyme homeobox 2 [Source:NCBI gene;Acc:374137]
18. HSPB8 ENSGALG00000007383 5333 2.218 - - 0.759 0.744 0.715 - - - - - heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
19. BHMT ENSGALG00000004518 4700 2.175 - 0.713 0.718 - - - - - - 0.744 betaine--homocysteine S-methyltransferase
20. TRIM55 ENSGALG00000041327 1097 1.724 - 0.829 0.895 - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
21. ACTN2 ENSGALG00000014463 1724 1.67 - - 0.815 - - - - - - 0.855 actinin alpha 2 [Source:NCBI gene;Acc:396263]
22. ACTA1 ENSGALG00000011086 2543 1.664 - - 0.866 0.798 - - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
23. MYF5 ENSGALG00000028091 1965 1.646 - 0.840 0.806 - - - - - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]
24. TITIN TITIN 589 1.645 - - - 0.809 - - - - - 0.836
25. TNNI2 ENSGALG00000006591 690 1.597 - 0.769 0.828 - - - - - - - troponin I2, fast skeletal type [Source:NCBI gene;Acc:396386]
26. TNNT2 ENSGALG00000000302 568 1.587 - - 0.801 0.786 - - - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
27. XIRP1 ENSGALG00000006025 729 1.585 - - 0.739 0.846 - - - - - - xin actin binding repeat containing 1 [Source:NCBI gene;Acc:374266]
28. KLHL31 ENSGALG00000016309 1518 1.568 - 0.735 0.833 - - - - - - - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
29. MYOG ENSGALG00000000172 460 1.555 - - 0.826 - 0.729 - - - - - myogenin [Source:NCBI gene;Acc:374004]
30. EN1 ENSGALG00000042389 3051 1.549 - - 0.800 0.749 - - - - - - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
31. ACBD7 ENSGALG00000019663 2328 1.544 - - 0.813 - - - - - - 0.731 acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
32. NGFR ENSGALG00000035950 13452 1.54 - 0.728 0.812 - - - - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
33. SMOC1 ENSGALG00000009415 2403 1.52 - - 0.746 - - - - - - 0.774 SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
34. TCF15 ENSGALG00000026276 3646 1.519 - - 0.754 0.765 - - - - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
35. CPZ ENSGALG00000030209 8822 1.508 - - - 0.796 - - - - - 0.712 carboxypeptidase Z [Source:NCBI gene;Acc:395266]
36. MYH15 ENSGALG00000015358 6304 1.5 - - 0.709 0.791 - - - - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
37. CRIP1 ENSGALG00000002771 4270 1.461 - 0.711 0.750 - - - - - - - cysteine rich protein 1 [Source:NCBI gene;Acc:101747696]
38. LIMD2 ENSGALG00000000529 30617 1.452 - 0.705 - 0.747 - - - - - - LIM domain containing 2 [Source:NCBI gene;Acc:419955]
39. GJD2 ENSGALG00000009845 236 0.855 - - 0.855 - - - - - - - gap junction protein delta 2 [Source:NCBI gene;Acc:395273]
40. MYBPC1 ENSGALG00000012783 317 0.853 - - 0.853 - - - - - - - myosin binding protein C, slow type [Source:HGNC Symbol;Acc:HGNC:7549]
41. AKR1D1 ENSGALG00000012834 15183 0.852 - - 0.852 - - - - - - - aldo-keto reductase family 1 member D1 [Source:NCBI gene;Acc:418107]
42. LGR5 ENSGALG00000010163 2931 0.824 - - - - - - - - - 0.824 leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
43. JSC JSC 7982 0.824 - - - - - - - - - 0.824
44. PITX3 ENSGALG00000005613 1518 0.817 - - - - 0.817 - - - - - paired like homeodomain 3
45. ABCC9 ENSGALG00000013244 2153 0.811 - - 0.811 - - - - - - - ATP binding cassette subfamily C member 9 [Source:HGNC Symbol;Acc:HGNC:60]
46. AKAP12 ENSGALG00000036240 64617 0.809 - - - - - - - - - 0.809 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
47. SULF1 ENSGALG00000039553 5115 0.808 - - - - - - - - - 0.808 sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
48. EBF2 ENSGALG00000000242 753 0.805 - - 0.805 - - - - - - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
49. RHOBTB3 ENSGALG00000014675 58 0.803 - - - - - 0.803 - - - - Rho related BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18757]
50. MYOD1 ENSGALG00000006216 568 0.789 - - - - - - - - - 0.789 myogenic differentiation 1 [Source:NCBI gene;Acc:374048]
51. INADL INADL 51 0.789 - - - - - 0.789 - - - -
52. FIGF FIGF 576 0.788 - - - - - - - - - 0.788
53. LIMCH1 ENSGALG00000014258 1987 0.782 - - 0.782 - - - - - - - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
54. PAX1 ENSGALG00000039040 3339 0.78 - - - - - - - - - 0.780 paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
55. GFRA2 ENSGALG00000032856 1314 0.778 - - 0.778 - - - - - - - GDNF family receptor alpha 2 [Source:NCBI gene;Acc:395993]
56. LOC395159 ENSGALG00000010722 9417 0.775 0.775 - - - - - - - - - Schwann cell-specific EGF-like repeat autocrine factor
57. MYF6 ENSGALG00000010936 1143 0.774 - 0.774 - - - - - - - - myogenic factor 6 [Source:NCBI gene;Acc:417873]
58. ENSGALG00000028654 ENSGALG00000028654 236 0.77 - - 0.770 - - - - - - -
59. ANGPTL1 ENSGALG00000004290 1922 0.769 - - - - - - - - - 0.769 angiopoietin like 1 [Source:NCBI gene;Acc:770850]
60. MYL4 ENSGALG00000000585 16982 0.768 - - 0.768 - - - - - - - myosin, light chain 4, alkali; atrial, embryonic [Source:NCBI gene;Acc:396472]
61. MYH1D ENSGALG00000027323 365 0.763 - - 0.763 - - - - - - - Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
62. SERPINE2 ENSGALG00000005135 16108 0.761 - - 0.761 - - - - - - - serpin family E member 2 [Source:NCBI gene;Acc:424805]
63. SSPN ENSGALG00000014042 638 0.759 - - 0.759 - - - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
64. RGMA ENSGALG00000039173 12874 0.758 - - - 0.758 - - - - - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
65. TNFIP6 TNFIP6 3024 0.756 - 0.756 - - - - - - - -
66. SCARF2 ENSGALG00000034560 6945 0.754 - - 0.754 - - - - - - - scavenger receptor class F member 2 [Source:HGNC Symbol;Acc:HGNC:19869]
67. PPP1R17 ENSGALG00000036390 2418 0.753 0.753 - - - - - - - - - protein phosphatase 1 regulatory subunit 17 [Source:HGNC Symbol;Acc:HGNC:16973]
68. SPON1 ENSGALG00000038775 16503 0.752 - - 0.752 - - - - - - - spondin 1 [Source:NCBI gene;Acc:395657]
69. KERA ENSGALG00000011270 4204 0.751 - - - - - - - - - 0.751 keratocan [Source:NCBI gene;Acc:373995]
70. LECT1 LECT1 12694 0.75 - - - - - - - - - 0.750
71. ENSGALG00000010933 ENSGALG00000010933 5 0.746 - - - - - 0.746 - - - -
72. CAMKK1 ENSGALG00000001617 64 0.743 - - - - - - - 0.743 - - calcium/calmodulin dependent protein kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:1469]
73. FOXD1 ENSGALG00000012644 2296 0.743 - - - - - - - - - 0.743 forkhead box D1 [Source:NCBI gene;Acc:396109]
74. GRSF1 2406 0.741 - - - - - - - 0.741 - - G-rich RNA sequence binding factor 1, transcript variant X2
75. EPB41L5 ENSGALG00000011605 18 0.741 - - - - - - - 0.741 - - erythrocyte membrane protein band 4.1 like 5 [Source:HGNC Symbol;Acc:HGNC:19819]
76. ENSGALG00000021386 ENSGALG00000021386 29 0.74 - - - - - 0.740 - - - -
77. CASQ2 ENSGALG00000015018 157 0.736 - - - - - - - - - 0.736 calsequestrin 2 [Source:NCBI gene;Acc:395198]
78. PRMT3 ENSGALG00000003958 14160 0.735 - - - - - - - - - 0.735 protein arginine methyltransferase 3 [Source:NCBI gene;Acc:422975]
79. GGMOXR1 GGMOXR1 6734 0.732 - - 0.732 - - - - - - -
80. FXYD6 ENSGALG00000025937 4073 0.729 - 0.729 - - - - - - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
81. PPAPDC1A PPAPDC1A 2790 0.727 - - - 0.727 - - - - - -
82. LPAR6 ENSGALG00000016998 36 0.727 - - - - - 0.727 - - - - lysophosphatidic acid receptor 6 [Source:NCBI gene;Acc:396118]
83. UNC45B ENSGALG00000002186 399 0.723 - - 0.723 - - - - - - - unc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]
84. AGTPBP1 ENSGALG00000012595 324 0.723 - - - - - 0.723 - - - - ATP/GTP binding protein 1 [Source:NCBI gene;Acc:427460]
85. ENSGALG00000015857 ENSGALG00000015857 238 0.723 - - - - - 0.723 - - - -
86. TMEM47 ENSGALG00000027198 3619 0.721 - - 0.721 - - - - - - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
87. AMPD1 ENSGALG00000002082 228 0.715 - - 0.715 - - - - - - - adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:HGNC:468]
88. BMP3 ENSGALG00000035052 3260 0.715 - - - 0.715 - - - - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
89. GPHB5 ENSGALG00000028839 45 0.713 - - - - - - - 0.713 - - glycoprotein hormone beta 5 [Source:HGNC Symbol;Acc:HGNC:18055]
90. COL22A1 ENSGALG00000038022 544 0.713 - - - 0.713 - - - - - - collagen type XXII alpha 1 chain [Source:NCBI gene;Acc:420315]
91. SPATS2L ENSGALG00000008152 3037 0.711 - - - 0.711 - - - - - - spermatogenesis associated serine rich 2 like [Source:NCBI gene;Acc:424067]
92. GFRA4 ENSGALG00000036589 2733 0.711 - - 0.711 - - - - - - - GDNF family receptor alpha 4 [Source:NCBI gene;Acc:395839]
93. CCDC141 ENSGALG00000020788 606 0.708 - - - - - - - - - 0.708 coiled-coil domain containing 141, transcript variant X5
94. PMP22 ENSGALG00000031425 5358 0.706 - - 0.706 - - - - - - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
95. FYB ENSGALG00000003792 333 0.705 - - - - - - - 0.705 - - FYN binding protein [Source:NCBI gene;Acc:427448]
96. LGALS1 ENSGALG00000012420 13993 0.703 - 0.703 - - - - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
97. CYBRD1 ENSGALG00000030703 162 0.702 - - - - - - - - - 0.702 cytochrome b reductase 1 [Source:HGNC Symbol;Acc:HGNC:20797]
98. FGF19 ENSGALG00000028376 104 0.702 - - - - 0.702 - - - - - fibroblast growth factor 19 [Source:NCBI gene;Acc:395394]
99. NTN3 ENSGALG00000029072 1368 0.701 - - - 0.701 - - - - - - netrin 1 [Source:NCBI gene;Acc:396387]
100. MUSTN1 ENSGALG00000001709 713 0.701 - 0.701 - - - - - - - - musculoskeletal, embryonic nuclear protein 1 [Source:NCBI gene;Acc:404773]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA