Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TNNI2

Gene Name Gene ID Reads Annotation
TNNI2 ENSGALG00000006591 690 troponin I2, fast skeletal type [Source:NCBI gene;Acc:396386]











Genes with expression patterns similar to TNNI2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TNNI2 ENSGALG00000006591 690 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 troponin I2, fast skeletal type [Source:NCBI gene;Acc:396386]
2. ACTC1 ENSGALG00000009844 20914 2.294 - 0.758 0.825 - 0.711 - - - - - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
3. KREMEN1 ENSGALG00000005808 5 1.625 - - - - - 0.794 - - - 0.831 kringle containing transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:17550]
4. TNNT3 ENSGALG00000006572 1652 1.597 - 0.769 0.828 - - - - - - - troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
5. TNNC2 ENSGALG00000006835 2963 1.571 - 0.770 0.801 - - - - - - - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
6. gga-mir-7474 ENSGALG00000033766 5727 1.519 - - 0.773 - 0.746 - - - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
7. MYL2_1 ENSGALG00000004582 2367 1.488 - 0.704 0.784 - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
8. TNNI1 ENSGALG00000000313 4069 1.487 - 0.770 0.717 - - - - - - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
9. PWP2 60 0.95 - - - - - 0.950 - - - - PWP2, small subunit processome component
10. CALB2 ENSGALG00000026903 32 0.894 - - - - - - - - - 0.894 calbindin 2 [Source:NCBI gene;Acc:396255]
11. PPM1A ENSGALG00000011917 281 0.884 - - - - - - - 0.884 - - protein phosphatase, Mg2+/Mn2+ dependent 1A [Source:HGNC Symbol;Acc:HGNC:9275]
12. C1QTNF3 ENSGALG00000027887 8646 0.877 - - 0.877 - - - - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
13. TRIM55 ENSGALG00000041327 1097 0.871 - - 0.871 - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
14. ENSGALG00000022155 ENSGALG00000022155 80 0.859 - - - - - - - - - 0.859
15. TUSC5 15 0.859 - - - - - - - - - 0.859 tumor suppressor candidate 5
16. ENSGALG00000014620 ENSGALG00000014620 7 0.853 - - - - - - - - - 0.853
17. ADAM28 ENSGALG00000000357 57 0.834 - - - - - - - 0.834 - - ADAM metallopeptidase domain 28, transcript variant X2
18. RAD51D ENSGALG00000031918 1312 0.833 - - - - - 0.833 - - - - RAD51 paralog D [Source:NCBI gene;Acc:417528]
19. PKD2L2 ENSGALG00000006120 592 0.83 - - 0.830 - - - - - - - polycystin 2 like 2, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9012]
20. gga-mir-30d ENSGALG00000018290 9 0.829 - - - - - 0.829 - - - - gga-mir-30d [Source:miRBase;Acc:MI0001198]
21. TEKT1 ENSGALG00000006064 18 0.829 - - - - - - - - - 0.829 tektin 1 [Source:HGNC Symbol;Acc:HGNC:15534]
22. LRRTM3 ENSGALG00000002864 29 0.827 - - - - - 0.827 - - - - leucine rich repeat transmembrane neuronal 3 [Source:NCBI gene;Acc:423649]
23. MYL3 ENSGALG00000005448 3379 0.823 - - 0.823 - - - - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
24. SEZ6L ENSGALG00000032415 56 0.822 - - - - - - - - - 0.822 seizure related 6 homolog like [Source:HGNC Symbol;Acc:HGNC:10763]
25. ACTA1 ENSGALG00000011086 2543 0.819 - - 0.819 - - - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
26. DNAJC13 ENSGALG00000035068 180 0.819 - - - 0.819 - - - - - - DnaJ heat shock protein family (Hsp40) member C13 [Source:HGNC Symbol;Acc:HGNC:30343]
27. EN1 ENSGALG00000042389 3051 0.818 - - 0.818 - - - - - - - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
28. AKR1D1 ENSGALG00000012834 15183 0.815 - - 0.815 - - - - - - - aldo-keto reductase family 1 member D1 [Source:NCBI gene;Acc:418107]
29. NTN4 ENSGALG00000011406 72 0.815 - - - 0.815 - - - - - - netrin 4 [Source:HGNC Symbol;Acc:HGNC:13658]
30. PLACL2 ENSGALG00000011190 222 0.814 - - - - - 0.814 - - - - Placenta-specific gene 8-like 2
31. GJD2 ENSGALG00000009845 236 0.814 - - 0.814 - - - - - - - gap junction protein delta 2 [Source:NCBI gene;Acc:395273]
32. WDR86 ENSGALG00000019690 113 0.813 - - - - - - - 0.813 - - WD repeat domain 86 [Source:HGNC Symbol;Acc:HGNC:28020]
33. SPON1 ENSGALG00000038775 16503 0.813 - - 0.813 - - - - - - - spondin 1 [Source:NCBI gene;Acc:395657]
34. FGF3 ENSGALG00000026853 89 0.812 - - - 0.812 - - - - - - fibroblast growth factor 3 [Source:NCBI gene;Acc:396267]
35. GPR139 ENSGALG00000027146 39 0.812 - - - - - - - - - 0.812 Gallus gallus G protein-coupled receptor 139 (GPR139), mRNA. [Source:RefSeq mRNA;Acc:NM_001321735]
36. MYBPC1 ENSGALG00000012783 317 0.803 - - 0.803 - - - - - - - myosin binding protein C, slow type [Source:HGNC Symbol;Acc:HGNC:7549]
37. ACBD7 ENSGALG00000019663 2328 0.796 - - 0.796 - - - - - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
38. RPLP1 ENSGALG00000030878 445592 0.796 - - - 0.796 - - - - - - ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
39. GALNTL6 ENSGALG00000030588 3 0.794 - - - - - 0.794 - - - - polypeptide N-acetylgalactosaminyltransferase-like 6
40. MFNG ENSGALG00000012442 5 0.794 - - - - - 0.794 - - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:7038]
41. CCR8 ENSGALG00000038069 6 0.794 - - - - - 0.794 - - - - C-C motif chemokine receptor 8 [Source:NCBI gene;Acc:420718]
42. USH2A ENSGALG00000009652 2 0.794 - - - - - 0.794 - - - - usherin, transcript variant X3
43. ESYT3 ENSGALG00000012092 13 0.794 - - - - - 0.794 - - - - extended synaptotagmin 3 [Source:HGNC Symbol;Acc:HGNC:24295]
44. ICK ENSGALG00000016321 19 0.794 - - - - - 0.794 - - - - intestinal cell kinase [Source:HGNC Symbol;Acc:HGNC:21219]
45. OGDHL ENSGALG00000002266 57 0.794 - - - - - 0.794 - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
46. ZMAT3 ENSGALG00000040948 4 0.794 - - - - - 0.794 - - - - zinc finger matrin-type 3 [Source:HGNC Symbol;Acc:HGNC:29983]
47. KCNK10 ENSGALG00000010598 7 0.794 - - - - - 0.794 - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
48. ENSGALG00000028527 ENSGALG00000028527 1 0.794 - - - - - 0.794 - - - -
49. ATP1B4 ENSGALG00000008593 39 0.794 - - - - - 0.794 - - - - ATPase Na+/K+ transporting family member beta 4 [Source:NCBI gene;Acc:422365]
50. PDC ENSGALG00000030417 4 0.794 - - - - - 0.794 - - - - phosducin [Source:HGNC Symbol;Acc:HGNC:8759]
51. LRCH3 ENSGALG00000007595 21 0.794 - - - - - 0.794 - - - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
52. NEXN ENSGALG00000008945 1504 0.793 - - 0.793 - - - - - - - nexilin F-actin binding protein [Source:HGNC Symbol;Acc:HGNC:29557]
53. SMOC1 ENSGALG00000009415 2403 0.792 - - 0.792 - - - - - - - SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
54. C7H2ORF69 ENSGALG00000008136 89 0.788 - - - - - 0.788 - - - - chromosome 7 open reading frame, human C2orf69 [Source:NCBI gene;Acc:424064]
55. ABCA1 ENSGALG00000015433 11 0.787 - - - - - 0.787 - - - - ATP-binding cassette, sub-family A (ABC1), member 1 [Source:NCBI gene;Acc:373945]
56. TOR1AIP2 ENSGALG00000004017 2 0.787 - - - - - 0.787 - - - - torsin 1A interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24055]
57. BMPR-II BMPR-II 33 0.785 - - - - - - - 0.785 - -
58. C12orf43 ENSGALG00000006965 437 0.784 - - - 0.784 - - - - - - chromosome 12 open reading frame 43 [Source:HGNC Symbol;Acc:HGNC:25719]
59. BCMO1 BCMO1 35 0.784 - - - - - - - 0.784 - -
60. KCNS2 ENSGALG00000043764 9 0.783 - - - - - - - - - 0.783 potassium voltage-gated channel modifier subfamily S member 2 [Source:HGNC Symbol;Acc:HGNC:6301]
61. SERPINE2 ENSGALG00000005135 16108 0.782 - - 0.782 - - - - - - - serpin family E member 2 [Source:NCBI gene;Acc:424805]
62. AIM1 51 0.782 - - - 0.782 - - - - - - absent in melanoma 1, transcript variant X2
63. MYH1D ENSGALG00000027323 365 0.782 - - 0.782 - - - - - - - Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
64. TCF15 ENSGALG00000026276 3646 0.781 - - 0.781 - - - - - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
65. KLHL31 ENSGALG00000016309 1518 0.781 - - 0.781 - - - - - - - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
66. CRHR1 ENSGALG00000000371 94 0.781 - - - - - - - - - 0.781 corticotropin releasing hormone receptor 1 [Source:NCBI gene;Acc:374218]
67. EPB41L4A ENSGALG00000000234 113 0.78 - - - 0.780 - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
68. C8B ENSGALG00000010853 21 0.778 - - - 0.778 - - - - - - Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
69. MMR1L3 ENSGALG00000008638 26 0.778 - - - 0.778 - - - - - - Gallus gallus macrophage mannose receptor 1-like 3 (MMR1L3), mRNA. [Source:RefSeq mRNA;Acc:NM_001319006]
70. ZNF385B ENSGALG00000009012 290 0.777 - - 0.777 - - - - - - - zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
71. CXorf22 CXorf22 20 0.776 - - - - - - - 0.776 - -
72. BFIV21 BFIV21 30 0.775 - - - 0.775 - - - - - -
73. PROC ENSGALG00000001780 26 0.773 - - - 0.773 - - - - - - protein C, inactivator of coagulation factors Va and VIIIa [Source:NCBI gene;Acc:395085]
74. ENSGALG00000010336 ENSGALG00000010336 16 0.771 - - - 0.771 - - - - - -
75. MAPK14 ENSGALG00000042833 13 0.77 - - - - - 0.770 - - - - mitogen-activated protein kinase 14 [Source:HGNC Symbol;Acc:HGNC:6876]
76. UBE2A ENSGALG00000008648 174 0.77 - - - 0.770 - - - - - - ubiquitin conjugating enzyme E2 A [Source:NCBI gene;Acc:395672]
77. XIRP1 ENSGALG00000006025 729 0.77 - - 0.770 - - - - - - - xin actin binding repeat containing 1 [Source:NCBI gene;Acc:374266]
78. GRIN2A ENSGALG00000007278 17 0.769 - - - 0.769 - - - - - - glutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]
79. C15orf60 C15orf60 16 0.769 - - - - - - - 0.769 - -
80. ABCC9 ENSGALG00000013244 2153 0.769 - - 0.769 - - - - - - - ATP binding cassette subfamily C member 9 [Source:HGNC Symbol;Acc:HGNC:60]
81. ATXN3 ENSGALG00000010766 48 0.768 - - - 0.768 - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
82. MYL1 ENSGALG00000002907 1300 0.768 - - 0.768 - - - - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
83. RYR2 ENSGALG00000010812 95 0.765 - - - 0.765 - - - - - - ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
84. CUBN ENSGALG00000008704 21 0.765 - - - 0.765 - - - - - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
85. CFAP74 ENSGALG00000001288 54 0.765 - - - 0.765 - - - - - - cilia and flagella associated protein 74 [Source:HGNC Symbol;Acc:HGNC:29368]
86. SLC25A29 ENSGALG00000011220 17 0.764 - - - - - 0.764 - - - - solute carrier family 25 member 29 [Source:HGNC Symbol;Acc:HGNC:20116]
87. STK17B ENSGALG00000007924 519 0.764 - - - 0.764 - - - - - - serine/threonine kinase 17b [Source:NCBI gene;Acc:424049]
88. VCL ENSGALG00000005079 90 0.761 - - - - - - - 0.761 - - vinculin [Source:NCBI gene;Acc:396422]
89. CRIP1 ENSGALG00000002771 4270 0.761 - - 0.761 - - - - - - - cysteine rich protein 1 [Source:NCBI gene;Acc:101747696]
90. ANKMY1 ENSGALG00000033920 12 0.757 - - - - - - - 0.757 - - ankyrin repeat and MYND domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20987]
91. LOC423752 ENSGALG00000020899 17 0.755 - - - - - - - 0.755 - - uncharacterized LOC423752, transcript variant X1
92. PAX1 ENSGALG00000039040 3339 0.755 - - 0.755 - - - - - - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
93. ANKRD28 ENSGALG00000011226 160 0.755 - - - 0.755 - - - - - - ankyrin repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29024]
94. GGMOXR1 GGMOXR1 6734 0.755 - - 0.755 - - - - - - -
95. MRPS14 ENSGALG00000030028 1987 0.754 - - - 0.754 - - - - - - mitochondrial ribosomal protein S14 [Source:NCBI gene;Acc:424436]
96. NGFR ENSGALG00000035950 13452 0.753 - 0.753 - - - - - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
97. PPP1R14C ENSGALG00000041575 1546 0.753 - - - 0.753 - - - - - - protein phosphatase 1 regulatory inhibitor subunit 14C [Source:HGNC Symbol;Acc:HGNC:14952]
98. TMEM182 ENSGALG00000038936 274 0.753 - - 0.753 - - - - - - - transmembrane protein 182 [Source:HGNC Symbol;Acc:HGNC:26391]
99. KIAA1549L ENSGALG00000012020 33 0.752 - - - - - - - 0.752 - - KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]
100. MYT1 ENSGALG00000005932 2017 0.75 - - - - 0.750 - - - - - myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]

There are 104 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA